RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 LAMA4Q16363 1823 aa12.54□□□□□ -0.4
COL4A1-205ENST00000615732 WDR46O15213 610 aaKnown RBP12.54□□□□□ -0.4
COL4A1-205ENST00000615732 FGAP02671 866 aa12.54□□□□□ -0.4
COL4A1-205ENST00000615732 EEF2P13639 858 aaKnown RBP12.54□□□□□ -0.4
COL4A1-205ENST00000615732 TRDNQ13061 729 aa12.54□□□□□ -0.4
COL4A1-205ENST00000615732 TMEM132BQ14DG7 1078 aa12.54□□□□□ -0.4
COL4A1-205ENST00000615732 OLFML2BQ68BL8 750 aa12.54□□□□□ -0.4
COL4A1-205ENST00000615732 Q6ZUG5 572 aa12.54□□□□□ -0.4
COL4A1-205ENST00000615732 STOX1Q6ZVD7 989 aa12.54□□□□□ -0.4
COL4A1-205ENST00000615732 AMOTL1Q8IY63 956 aa12.54□□□□□ -0.4
COL4A1-205ENST00000615732 MB21D1Q8N884 522 aa12.54□□□□□ -0.4
COL4A1-205ENST00000615732 SHCBP1Q8NEM2 672 aa12.54□□□□□ -0.4
COL4A1-205ENST00000615732 STRBPQ96SI9 672 aaKnown RBP12.54□□□□□ -0.4
COL4A1-205ENST00000615732 NAPBQ9H115 298 aa12.54□□□□□ -0.4
COL4A1-205ENST00000615732 SH2D4AQ9H788 454 aa12.54□□□□□ -0.4
COL4A1-205ENST00000615732 BAZ2AQ9UIF9 1905 aaKnown RBP12.54□□□□□ -0.4
COL4A1-205ENST00000615732 PARP14Q460N5 1801 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 PATL2C9JE40 543 aaKnown RBP12.53□□□□□ -0.4
COL4A1-205ENST00000615732 LARGE1O95461 756 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 PGK2P07205 417 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 TDO2P48775 406 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 TOB2Q14106 344 aaPredicted RBP12.53□□□□□ -0.4
COL4A1-205ENST00000615732 SHHQ15465 462 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 ALX1Q15699 326 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 TRIM60Q495X7 471 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 FAM47AQ5JRC9 791 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 C9orf50Q5SZB4 431 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 FAM83BQ5T0W9 1011 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 ZNF697Q5TEC3 545 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 CTR9Q6PD62 1173 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 SLC39A5Q6ZMH5 540 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 NCOA7Q8NI08 942 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 LENG1Q96BZ8 264 aaPredicted RBP12.53□□□□□ -0.4
COL4A1-205ENST00000615732 NUP88Q99567 741 aaPredicted RBP12.53□□□□□ -0.4
COL4A1-205ENST00000615732 PRDM5Q9NQX1 630 aaPredicted RBP12.53□□□□□ -0.4
COL4A1-205ENST00000615732 PRKAG2Q9UGJ0 569 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 TPCN1Q9ULQ1 816 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 ZMYM6O95789 1325 aa12.53□□□□□ -0.4
COL4A1-205ENST00000615732 KBTBD13C9JR72 458 aa12.52□□□□□ -0.41
COL4A1-205ENST00000615732 FOXP2O15409 715 aa12.52□□□□□ -0.41
COL4A1-205ENST00000615732 SEPT4O43236 478 aa12.52□□□□□ -0.41
COL4A1-205ENST00000615732 STRNO43815 780 aa12.52□□□□□ -0.41
COL4A1-205ENST00000615732 SNX17Q15036 470 aa12.52□□□□□ -0.41
COL4A1-205ENST00000615732 ME3Q16798 604 aa12.52□□□□□ -0.41
COL4A1-205ENST00000615732 FERMT2Q96AC1 680 aa12.52□□□□□ -0.41
COL4A1-205ENST00000615732 CHMP4CQ96CF2 233 aa12.52□□□□□ -0.41
COL4A1-205ENST00000615732 MAML3Q96JK9 1138 aa12.52□□□□□ -0.41
COL4A1-205ENST00000615732 CCDC17Q96LX7 622 aa12.52□□□□□ -0.41
COL4A1-205ENST00000615732 MMP19Q99542 508 aa12.52□□□□□ -0.41
COL4A1-205ENST00000615732 MROH8Q9H579 483 aa12.52□□□□□ -0.41
COL4A1-205ENST00000615732 PDLIM7Q9NR12 457 aa12.52□□□□□ -0.41
COL4A1-205ENST00000615732 MYH8P13535 1937 aa12.51□□□□□ -0.41
COL4A1-205ENST00000615732 FCER1AP12319 257 aa12.51□□□□□ -0.41
COL4A1-205ENST00000615732 TAL1P17542 331 aaPredicted RBP12.51□□□□□ -0.41
COL4A1-205ENST00000615732 MCM5P33992 734 aa12.51□□□□□ -0.41
COL4A1-205ENST00000615732 SH3RF1Q7Z6J0 888 aa12.51□□□□□ -0.41
COL4A1-205ENST00000615732 IFNL3Q8IZI9 196 aa12.51□□□□□ -0.41
COL4A1-205ENST00000615732 NECAB1Q8N987 351 aa12.51□□□□□ -0.41
COL4A1-205ENST00000615732 ARRDC4Q8NCT1 418 aa12.51□□□□□ -0.41
COL4A1-205ENST00000615732 BADQ92934 168 aa12.51□□□□□ -0.41
COL4A1-205ENST00000615732 BRF1Q92994 677 aa12.51□□□□□ -0.41
COL4A1-205ENST00000615732 CDX2Q99626 313 aaPredicted RBP12.51□□□□□ -0.41
COL4A1-205ENST00000615732 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL4A1-205ENST00000615732 LRRC2Q9BYS8 371 aa12.51□□□□□ -0.41
COL4A1-205ENST00000615732 GOPCQ9HD26 462 aa12.51□□□□□ -0.41
COL4A1-205ENST00000615732 ARPP21Q9UBL0 812 aaPredicted RBP12.51□□□□□ -0.41
COL4A1-205ENST00000615732 PPP1R9AQ9ULJ8 1098 aa12.51□□□□□ -0.41
COL4A1-205ENST00000615732 NAP1L2Q9ULW6 460 aaPredicted RBP12.51□□□□□ -0.41
COL4A1-205ENST00000615732 TRIM43BA6NCK2 446 aa12.5□□□□□ -0.41
COL4A1-205ENST00000615732 MINDY4BA8MYZ0 360 aa12.5□□□□□ -0.41
COL4A1-205ENST00000615732 VWA5AO00534 786 aa12.5□□□□□ -0.41
COL4A1-205ENST00000615732 BAG4O95429 457 aaKnown RBP12.5□□□□□ -0.41
COL4A1-205ENST00000615732 PGK1P00558 417 aa12.5□□□□□ -0.41
COL4A1-205ENST00000615732 RASA1P20936 1047 aa12.5□□□□□ -0.41
COL4A1-205ENST00000615732 GJB2P29033 226 aa12.5□□□□□ -0.41
COL4A1-205ENST00000615732 ADCYAP1R1P41586 468 aa12.5□□□□□ -0.41
COL4A1-205ENST00000615732 STK3Q13188 491 aa12.5□□□□□ -0.41
COL4A1-205ENST00000615732 PKP1Q13835 747 aa12.5□□□□□ -0.41
COL4A1-205ENST00000615732 LRRC41Q15345 812 aa12.5□□□□□ -0.41
COL4A1-205ENST00000615732 FOXD4L5Q5VV16 416 aaPredicted RBP12.5□□□□□ -0.41
COL4A1-205ENST00000615732 ABRAQ8N0Z2 381 aa12.5□□□□□ -0.41
COL4A1-205ENST00000615732 FOXD4L4Q8WXT5 416 aaPredicted RBP12.5□□□□□ -0.41
COL4A1-205ENST00000615732 TRIM43Q96BQ3 446 aaPredicted RBP12.5□□□□□ -0.41
COL4A1-205ENST00000615732 TTYH1Q9H313 450 aaPredicted RBP12.5□□□□□ -0.41
COL4A1-205ENST00000615732 KANSL2Q9H9L4 492 aa12.5□□□□□ -0.41
COL4A1-205ENST00000615732 EPB41L4AQ9HCS5 686 aaPredicted RBP12.5□□□□□ -0.41
COL4A1-205ENST00000615732 SLC5A4Q9NY91 659 aa12.5□□□□□ -0.41
COL4A1-205ENST00000615732 COL11A1P12107 1806 aaPredicted RBP12.5□□□□□ -0.41
COL4A1-205ENST00000615732 ROBO3Q96MS0 1386 aa12.49□□□□□ -0.41
COL4A1-205ENST00000615732 WDR19Q8NEZ3 1342 aa12.49□□□□□ -0.41
COL4A1-205ENST00000615732 PRC1O43663 620 aa12.49□□□□□ -0.41
COL4A1-205ENST00000615732 PRDM1O75626 825 aa12.49□□□□□ -0.41
COL4A1-205ENST00000615732 BRD1O95696 1058 aa12.49□□□□□ -0.41
COL4A1-205ENST00000615732 SLC25A27O95847 323 aa12.49□□□□□ -0.41
COL4A1-205ENST00000615732 EXOSC10Q01780 885 aaKnown RBP12.49□□□□□ -0.41
COL4A1-205ENST00000615732 KCTD2Q14681 263 aa12.49□□□□□ -0.41
COL4A1-205ENST00000615732 RIOX2Q8IUF8 465 aa12.49□□□□□ -0.41
COL4A1-205ENST00000615732 TBC1D10CQ8IV04 446 aa12.49□□□□□ -0.41
COL4A1-205ENST00000615732 MB21D2Q8IYB1 491 aaPredicted RBP12.49□□□□□ -0.41
COL4A1-205ENST00000615732 REPS2Q8NFH8 660 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms