RNA–Protein interactions for RNA: ENST00000614778.4

PDCD6-212, Transcript of programmed cell death 6, humanhuman

TSL 2 BASIC

Gene PDCD6, Length 1,050 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-212ENST00000614778 GOLGA8HP0CJ92 632 aa18.41■□□□□ 0.54
PDCD6-212ENST00000614778 CYBAP13498 195 aa18.41■□□□□ 0.54
PDCD6-212ENST00000614778 MNX1P50219 401 aaPredicted RBP18.41■□□□□ 0.54
PDCD6-212ENST00000614778 SEC23AQ15436 765 aa18.41■□□□□ 0.54
PDCD6-212ENST00000614778 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.41■□□□□ 0.543e-7■■■□□ 15.3
PDCD6-212ENST00000614778 DIS3LQ8TF46 1054 aaKnown RBP18.41■□□□□ 0.54
PDCD6-212ENST00000614778 RANBP17Q9H2T7 1088 aaKnown RBP18.41■□□□□ 0.54
PDCD6-212ENST00000614778 CPVLQ9H3G5 476 aa18.41■□□□□ 0.54
PDCD6-212ENST00000614778 CEP290O15078 2479 aa18.4■□□□□ 0.54
PDCD6-212ENST00000614778 COL9A3Q14050 684 aaPredicted RBP18.4■□□□□ 0.54
PDCD6-212ENST00000614778 CCDC178Q5BJE1 867 aa18.4■□□□□ 0.54
PDCD6-212ENST00000614778 KIAA1211Q6ZU35 1233 aa18.4■□□□□ 0.54
PDCD6-212ENST00000614778 CHST13Q8NET6 341 aa18.4■□□□□ 0.54
PDCD6-212ENST00000614778 UBAC1Q9BSL1 405 aa18.4■□□□□ 0.54
PDCD6-212ENST00000614778 KAT14Q9H8E8 782 aa18.4■□□□□ 0.54
PDCD6-212ENST00000614778 RNF146Q9NTX7 359 aa18.4■□□□□ 0.54
PDCD6-212ENST00000614778 SLC5A4Q9NY91 659 aa18.4■□□□□ 0.54
PDCD6-212ENST00000614778 OGDHLQ9ULD0 1010 aa18.4■□□□□ 0.54
PDCD6-212ENST00000614778 MCM3APO60318 1980 aa18.4■□□□□ 0.54
PDCD6-212ENST00000614778 ALAS1P13196 640 aa18.39■□□□□ 0.53
PDCD6-212ENST00000614778 MUM1L1Q5H9M0 696 aa18.39■□□□□ 0.53
PDCD6-212ENST00000614778 CHST3Q7LGC8 479 aa18.39■□□□□ 0.53
PDCD6-212ENST00000614778 DDX11Q96FC9 970 aa18.39■□□□□ 0.53
PDCD6-212ENST00000614778 PAWRQ96IZ0 340 aaKnown RBP18.39■□□□□ 0.53
PDCD6-212ENST00000614778 FGD4Q96M96 766 aa18.39■□□□□ 0.53
PDCD6-212ENST00000614778 SENP2Q9HC62 589 aa18.39■□□□□ 0.53
PDCD6-212ENST00000614778 ANO2Q9NQ90 1003 aa18.39■□□□□ 0.53
PDCD6-212ENST00000614778 DIS3Q9Y2L1 958 aaKnown RBP18.39■□□□□ 0.53
PDCD6-212ENST00000614778 DNAH12Q6ZR08 3092 aa18.38■□□□□ 0.53
PDCD6-212ENST00000614778 CNGA1P29973 690 aa18.38■□□□□ 0.53
PDCD6-212ENST00000614778 ANTXR2P58335 489 aa18.38■□□□□ 0.53
PDCD6-212ENST00000614778 TRDNQ13061 729 aa18.38■□□□□ 0.53
PDCD6-212ENST00000614778 TRERF1Q96PN7 1200 aa18.38■□□□□ 0.53
PDCD6-212ENST00000614778 TINF2Q9BSI4 451 aa18.38■□□□□ 0.53
PDCD6-212ENST00000614778 UBA5Q9GZZ9 404 aa18.38■□□□□ 0.53
PDCD6-212ENST00000614778 ACAD9Q9H845 621 aa18.38■□□□□ 0.53
PDCD6-212ENST00000614778 A1CFQ9NQ94 594 aaKnown RBP18.38■□□□□ 0.53
PDCD6-212ENST00000614778 FBXO40Q9UH90 709 aa18.38■□□□□ 0.53
PDCD6-212ENST00000614778 DDX20Q9UHI6 824 aaKnown RBP18.38■□□□□ 0.53
PDCD6-212ENST00000614778 CCPG1Q9ULG6 757 aa18.38■□□□□ 0.53
PDCD6-212ENST00000614778 LCTP09848 1927 aa18.37■□□□□ 0.53
PDCD6-212ENST00000614778 ALPK3Q96L96 1907 aa18.37■□□□□ 0.53
PDCD6-212ENST00000614778 SLC27A2O14975 620 aa18.37■□□□□ 0.53
PDCD6-212ENST00000614778 CDC45O75419 566 aa18.37■□□□□ 0.53
PDCD6-212ENST00000614778 ICAM1P05362 532 aa18.37■□□□□ 0.53
PDCD6-212ENST00000614778 NECTIN1Q15223 517 aa18.37■□□□□ 0.53
PDCD6-212ENST00000614778 IFIT1BQ5T764 474 aaKnown RBP18.37■□□□□ 0.53
PDCD6-212ENST00000614778 ANO1Q5XXA6 986 aa18.37■□□□□ 0.53
PDCD6-212ENST00000614778 MB21D2Q8IYB1 491 aaPredicted RBP18.37■□□□□ 0.53
PDCD6-212ENST00000614778 ANKRD35Q8N283 1001 aa18.37■□□□□ 0.53
PDCD6-212ENST00000614778 NCOA7Q8NI08 942 aa18.37■□□□□ 0.53
PDCD6-212ENST00000614778 CENPBP07199 599 aaPredicted RBP18.36■□□□□ 0.53
PDCD6-212ENST00000614778 CAPN2P17655 700 aa18.36■□□□□ 0.53
PDCD6-212ENST00000614778 CNTN2Q02246 1040 aa18.36■□□□□ 0.53
PDCD6-212ENST00000614778 TKFCQ3LXA3 575 aa18.36■□□□□ 0.53
PDCD6-212ENST00000614778 GPATCH4Q5T3I0 446 aaKnown RBP18.36■□□□□ 0.53
PDCD6-212ENST00000614778 CREB3L3Q68CJ9 461 aa18.36■□□□□ 0.53
PDCD6-212ENST00000614778 RALYLQ86SE5 291 aaKnown RBP18.36■□□□□ 0.53
PDCD6-212ENST00000614778 ANKLE1Q8NAG6 615 aa18.36■□□□□ 0.53
PDCD6-212ENST00000614778 ASTN1O14525 1302 aa18.35■□□□□ 0.53
PDCD6-212ENST00000614778 IFIT3O14879 490 aaKnown RBP18.35■□□□□ 0.53
PDCD6-212ENST00000614778 SNAI1O95863 264 aaPredicted RBP18.35■□□□□ 0.53
PDCD6-212ENST00000614778 PRPF38BQ5VTL8 546 aaKnown RBP18.35■□□□□ 0.53
PDCD6-212ENST00000614778 STAG2Q8N3U4 1231 aa18.35■□□□□ 0.53
PDCD6-212ENST00000614778 FAM133AQ8N9E0 248 aa18.35■□□□□ 0.53
PDCD6-212ENST00000614778 GPHNQ9NQX3 736 aaPredicted RBP18.35■□□□□ 0.53
PDCD6-212ENST00000614778 PPP4R2Q9NY27 417 aa18.35■□□□□ 0.53
PDCD6-212ENST00000614778 SOWAHBA6NEL2 793 aa18.34■□□□□ 0.53
PDCD6-212ENST00000614778 NFIBO00712 420 aa18.34■□□□□ 0.53
PDCD6-212ENST00000614778 SEPT4O43236 478 aa18.34■□□□□ 0.53
PDCD6-212ENST00000614778 PARP1P09874 1014 aaKnown RBP18.34■□□□□ 0.53
PDCD6-212ENST00000614778 ZNF865P0CJ78 1059 aaPredicted RBP18.34■□□□□ 0.53
PDCD6-212ENST00000614778 ASPRV1Q53RT3 343 aa18.34■□□□□ 0.53
PDCD6-212ENST00000614778 MAMDC4Q6UXC1 1216 aa18.34■□□□□ 0.53
PDCD6-212ENST00000614778 NECAB2Q7Z6G3 386 aa18.34■□□□□ 0.53
PDCD6-212ENST00000614778 IGDCC4Q8TDY8 1250 aa18.34■□□□□ 0.53
PDCD6-212ENST00000614778 CLEC4DQ8WXI8 215 aa18.34■□□□□ 0.53
PDCD6-212ENST00000614778 PURBQ96QR8 312 aaKnown RBP18.34■□□□□ 0.53
PDCD6-212ENST00000614778 DDX49Q9Y6V7 483 aaKnown RBP18.34■□□□□ 0.53
PDCD6-212ENST00000614778 MYH6P13533 1939 aa18.33■□□□□ 0.53
PDCD6-212ENST00000614778 PFASO15067 1338 aa18.33■□□□□ 0.53
PDCD6-212ENST00000614778 BAZ2BQ9UIF8 2168 aaKnown RBP18.33■□□□□ 0.52
PDCD6-212ENST00000614778 POTEB2H3BUK9 544 aa18.33■□□□□ 0.52
PDCD6-212ENST00000614778 SLC35G1Q2M3R5 365 aa18.33■□□□□ 0.52
PDCD6-212ENST00000614778 ZNF467Q7Z7K2 595 aaPredicted RBP18.33■□□□□ 0.52
PDCD6-212ENST00000614778 ADGRF4Q8IZF3 695 aa18.33■□□□□ 0.52
PDCD6-212ENST00000614778 CYP39A1Q9NYL5 469 aa18.33■□□□□ 0.52
PDCD6-212ENST00000614778 SYNGAP1Q96PV0 1343 aa18.32■□□□□ 0.52
PDCD6-212ENST00000614778 MSCO60682 206 aa18.32■□□□□ 0.52
PDCD6-212ENST00000614778 COL6A1P12109 1028 aa18.32■□□□□ 0.52
PDCD6-212ENST00000614778 WTAPQ15007 396 aa18.32■□□□□ 0.52
PDCD6-212ENST00000614778 CDC37Q16543 378 aaPredicted RBP18.32■□□□□ 0.52
PDCD6-212ENST00000614778 TMEM67Q5HYA8 995 aa18.32■□□□□ 0.52
PDCD6-212ENST00000614778 NSMFQ6X4W1 530 aa18.32■□□□□ 0.52
PDCD6-212ENST00000614778 MSL3Q8N5Y2 521 aaKnown RBP18.32■□□□□ 0.52
PDCD6-212ENST00000614778 DPF3Q92784 378 aa18.32■□□□□ 0.52
PDCD6-212ENST00000614778 LENG1Q96BZ8 264 aaPredicted RBP18.32■□□□□ 0.52
PDCD6-212ENST00000614778 JMJD4Q9H9V9 463 aa18.32■□□□□ 0.52
PDCD6-212ENST00000614778 NRBP1Q9UHY1 535 aa18.32■□□□□ 0.52
PDCD6-212ENST00000614778 MAD2L2Q9UI95 211 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms