RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 ALG1Q9BT22 464 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 PHF20Q9BVI0 1012 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 GPCPD1Q9NPB8 672 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 MAP3K20Q9NYL2 800 aaKnown RBP7.2□□□□□ -1.26
CBWD3-210ENST00000614398 SEC63Q9UGP8 760 aaKnown RBP7.2□□□□□ -1.26
CBWD3-210ENST00000614398 FZD1Q9UP38 647 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 ABCB11O95342 1321 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 FRMPD2Q68DX3 1309 aaPredicted RBP7.2□□□□□ -1.26
CBWD3-210ENST00000614398 TRIM75PA6NK02 468 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 FAM155AB1AL88 458 aaPredicted RBP7.2□□□□□ -1.26
CBWD3-210ENST00000614398 STX6O43752 255 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 ICAM1P05362 532 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 SYT1P21579 422 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 BRD2P25440 801 aaKnown RBP7.2□□□□□ -1.26
CBWD3-210ENST00000614398 APLP1P51693 650 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 HUNKP57058 714 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 COG2Q14746 738 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 TTBK2Q6IQ55 1244 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 KCTD1Q719H9 257 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 CCDC84Q86UT8 332 aaPredicted RBP7.2□□□□□ -1.26
CBWD3-210ENST00000614398 RAB11FIP4Q86YS3 637 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 CCDC144CPQ8IYA2 1237 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 PHKBQ93100 1093 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 C8orf76Q96K31 380 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 ZMYND12Q9H0C1 365 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 HOXC10Q9NYD6 342 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 PNMA3Q9UL41 463 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 MTMR6Q9Y217 621 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 V9GY48 417 aaPredicted RBP7.2□□□□□ -1.26
CBWD3-210ENST00000614398 ADGRA2Q96PE1 1338 aa7.2□□□□□ -1.26
CBWD3-210ENST00000614398 M0R2N6 131 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 GOLGA8HP0CJ92 632 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 OSBPP22059 807 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 PRKG1Q13976 671 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 CDC37Q16543 378 aaPredicted RBP7.19□□□□□ -1.26
CBWD3-210ENST00000614398 QRICH1Q2TAL8 776 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 LARP1BQ659C4 914 aaKnown RBP7.19□□□□□ -1.26
CBWD3-210ENST00000614398 WWC2Q6AWC2 1192 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 ATL3Q6DD88 541 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 RASGRP2Q7LDG7 609 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 PIGSQ96S52 555 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 AMNQ9BXJ7 453 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 CFHR5Q9BXR6 569 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 FOXP1Q9H334 677 aaPredicted RBP7.19□□□□□ -1.26
CBWD3-210ENST00000614398 ZSCAN16Q9H4T2 348 aaPredicted RBP7.19□□□□□ -1.26
CBWD3-210ENST00000614398 ZNF536O15090 1300 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 SPDYE16A6NNV3 312 aaPredicted RBP7.19□□□□□ -1.26
CBWD3-210ENST00000614398 PIK3CDO00329 1044 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 PPP1R11O60927 126 aaPredicted RBP7.19□□□□□ -1.26
CBWD3-210ENST00000614398 ZBED4O75132 1171 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 MMP1P03956 469 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 ZSCAN22P10073 491 aaPredicted RBP7.19□□□□□ -1.26
CBWD3-210ENST00000614398 U2AF2P26368 475 aaKnown RBP eCLIP7.19□□□□□ -1.26
CBWD3-210ENST00000614398 NPY5RQ15761 445 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 BRAPQ7Z569 592 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 BICD2Q8TD16 824 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 TNFRSF25Q93038 417 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 NUP88Q99567 741 aaPredicted RBP7.19□□□□□ -1.26
CBWD3-210ENST00000614398 ZNF408Q9H9D4 720 aa7.19□□□□□ -1.26
CBWD3-210ENST00000614398 VWA5AO00534 786 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 TM4SF4P48230 202 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 GCLCP48506 637 aaPredicted RBP7.18□□□□□ -1.26
CBWD3-210ENST00000614398 RESTQ13127 1097 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 ORC2Q13416 577 aaPredicted RBP7.18□□□□□ -1.26
CBWD3-210ENST00000614398 TRIM29Q14134 588 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 KRT40Q6A162 431 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 FBXO11Q86XK2 927 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 SHCBP1Q8NEM2 672 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 BRI3BPQ8WY22 251 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 SHISA4Q96DD7 197 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 UBA5Q9GZZ9 404 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 RIC8AQ9NPQ8 531 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 RRAGDQ9NQL2 400 aaPredicted RBP7.18□□□□□ -1.26
CBWD3-210ENST00000614398 MORF4L1Q9UBU8 362 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 ZDHHC9Q9Y397 364 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 FRMPD4Q14CM0 1322 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 GNA11P29992 359 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 SLC4A3P48751 1232 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 CLK2P49760 499 aaKnown RBP7.18□□□□□ -1.26
CBWD3-210ENST00000614398 SREBF2Q12772 1141 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 TREML2Q5T2D2 321 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 SPICE1Q8N0Z3 855 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 DDX11Q96FC9 970 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 MAP7D2Q96T17 732 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 TANGO6Q9C0B7 1094 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 PCDHA4Q9UN74 947 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 MRPL11Q9Y3B7 192 aaKnown RBP7.18□□□□□ -1.26
CBWD3-210ENST00000614398 RABGAP1Q9Y3P9 1069 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 LRRC37A2A6NM11 1700 aa7.18□□□□□ -1.26
CBWD3-210ENST00000614398 CCL15-CCL14A0A0B4J2E2 113 aa7.17□□□□□ -1.26
CBWD3-210ENST00000614398 LOC102724159A0A0B4J2E5 919 aa7.17□□□□□ -1.26
CBWD3-210ENST00000614398 FLOT1O75955 427 aa7.17□□□□□ -1.26
CBWD3-210ENST00000614398 F13A1P00488 732 aa7.17□□□□□ -1.26
CBWD3-210ENST00000614398 TRAPPC10P48553 1259 aa7.17□□□□□ -1.26
CBWD3-210ENST00000614398 KIF23Q02241 960 aaPredicted RBP7.17□□□□□ -1.26
CBWD3-210ENST00000614398 PWP2Q15269 919 aaKnown RBP7.17□□□□□ -1.26
CBWD3-210ENST00000614398 SAFBQ15424 915 aaKnown RBP eCLIP7.17□□□□□ -1.26
CBWD3-210ENST00000614398 CCL15Q16663 113 aa7.17□□□□□ -1.26
CBWD3-210ENST00000614398 L1TD1Q5T7N2 865 aaKnown RBP7.17□□□□□ -1.26
CBWD3-210ENST00000614398 GADL1Q6ZQY3 521 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms