RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 ZMYM6O95789 1325 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 TFAP4Q01664 338 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 NFIAQ12857 509 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 EARS2Q5JPH6 523 aaKnown RBP13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 FKBP15Q5T1M5 1219 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 CCDC125Q86Z20 511 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 PNKPQ96T60 521 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 BLZF1Q9H2G9 400 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 ABCB6Q9NP58 842 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 VPS54Q9P1Q0 977 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 MYH2Q9UKX2 1941 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 FAM205AQ6ZU69 1335 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 GPR75-ASB3A0A0A6YYF3 556 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 ATP8B1O43520 1251 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 KCNJ6P48051 423 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 RHBDL3P58872 404 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 SSRP1Q08945 709 aaKnown RBP13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 IQCA1Q86XH1 822 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 FAM204AQ9H8W3 233 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 POLD4Q9HCU8 107 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 DDX4Q9NQI0 724 aaKnown RBP13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 STX8Q9UNK0 236 aa13.25□□□□□ -0.29
PPP4R3B-204ENST00000612688 PES1O00541 588 aaKnown RBP13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 CRKP46108 304 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 EIF6P56537 245 aaKnown RBP13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 CHMP4BP1P59074 171 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 POSTNQ15063 836 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 IFIT1BQ5T764 474 aaKnown RBP13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 RESP18Q5W5W9 173 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 FBXW10Q5XX13 1052 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 CPLX2Q6PUV4 134 aaKnown RBP13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 ENAHQ8N8S7 591 aaPredicted RBP13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 TEKT1Q969V4 418 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 TMEM87BQ96K49 555 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 CSRNP2Q9H175 543 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 HPSEQ9Y251 543 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 DUOX1Q9NRD9 1551 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 RAD21O60216 631 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 TUBB4AP04350 444 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 TPM1P09493 284 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 TMEM139Q8IV31 216 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 ZFPM1Q8IX07 1006 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 SLF2Q8IX21 1173 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 TC2NQ8N9U0 490 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 ARPP21Q9UBL0 812 aaPredicted RBP13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 TUBE1Q9UJT0 475 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 FLT1P17948 1338 aa13.24□□□□□ -0.29
PPP4R3B-204ENST00000612688 A0A087X0B3 334 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 ZMYND10O75800 440 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 IVLP07476 585 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 AKAP17AQ02040 695 aaKnown RBP13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 NTRK3Q16288 839 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 DALRD3Q5D0E6 543 aaKnown RBP13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 RBM26Q5T8P6 1007 aaKnown RBP13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 C12orf60Q5U649 245 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 ZNF444Q8N0Y2 327 aaPredicted RBP13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 KRI1Q8N9T8 703 aaKnown RBP13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 NLGN2Q8NFZ4 835 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 ZSCAN10Q96SZ4 725 aaPredicted RBP13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 TDRD3Q9H7E2 651 aaKnown RBP13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 CCP110O43303 1012 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 TSPY3P0CV98 308 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 TSPY8P0CW00 308 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 DACT2Q5SW24 774 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 CDC42EP5Q6NZY7 148 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 CLEC10AQ8IUN9 316 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 ACRBPQ8NEB7 543 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 CLRN2A0PK11 232 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 ZSCAN12O43309 604 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 CD44P16070 742 aaKnown RBP13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 ATP2B2Q01814 1243 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 ZNF174Q15697 407 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 KIF4BQ2VIQ3 1234 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 LRRC31Q6UY01 552 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 RASGRP2Q7LDG7 609 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 NOSTRINQ8IVI9 506 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 ZNF654Q8IZM8 581 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 JMYQ8N9B5 988 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 PPM1EQ8WY54 764 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 PLIN2Q99541 437 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 NRXN2Q9P2S2 1712 aa13.23□□□□□ -0.29
PPP4R3B-204ENST00000612688 IKBKBO14920 756 aa13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 TXLNAP40222 546 aa13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 PPP4CP60510 307 aa13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 RBL2Q08999 1139 aa13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 BPIFA3Q9BQP9 254 aa13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 CCDC88AQ3V6T2 1871 aa13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 PSMD14O00487 310 aa13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 CBFA2T2O43439 604 aa13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 RTN1Q16799 776 aa13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 STRIP1Q5VSL9 837 aa13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 APOBEC3HQ6NTF7 200 aaKnown RBP13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 RAD9BQ6WBX8 426 aa13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 EHD4Q9H223 541 aa13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 MKRN1Q9UHC7 482 aaKnown RBP13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 MRFAP1Q9Y605 127 aa13.22□□□□□ -0.29
PPP4R3B-204ENST00000612688 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 MAP3K9P80192 1104 aa13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 ZNF569Q5MCW4 686 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms