RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 FBXO28Q9NVF7 368 aa16.94■□□□□ 0.3
CIT-219ENST00000612548 FEM1BQ9UK73 627 aa16.94■□□□□ 0.3
CIT-219ENST00000612548 RCOR1Q9UKL0 485 aa16.94■□□□□ 0.3
CIT-219ENST00000612548 ESYT2A0FGR8 921 aa16.94■□□□□ 0.3
CIT-219ENST00000612548 VCAM1P19320 739 aa16.94■□□□□ 0.3
CIT-219ENST00000612548 GNA11P29992 359 aa16.94■□□□□ 0.3
CIT-219ENST00000612548 NASPP49321 788 aaPredicted RBP16.94■□□□□ 0.3
CIT-219ENST00000612548 TOB1P50616 345 aaPredicted RBP16.94■□□□□ 0.3
CIT-219ENST00000612548 RILPL1Q5EBL4 403 aa16.94■□□□□ 0.3
CIT-219ENST00000612548 PIK3AP1Q6ZUJ8 805 aa16.94■□□□□ 0.3
CIT-219ENST00000612548 FAM160B2Q86V87 743 aa16.94■□□□□ 0.3
CIT-219ENST00000612548 M0R2N6 131 aa16.93■□□□□ 0.3
CIT-219ENST00000612548 TRAF5O00463 557 aa16.93■□□□□ 0.3
CIT-219ENST00000612548 PLA2G6O60733 806 aa16.93■□□□□ 0.3
CIT-219ENST00000612548 YEATS4O95619 227 aa16.93■□□□□ 0.3
CIT-219ENST00000612548 ATP2B1P20020 1258 aa16.93■□□□□ 0.3
CIT-219ENST00000612548 SF3A1Q15459 793 aaKnown RBP16.93■□□□□ 0.3
CIT-219ENST00000612548 KLHL40Q2TBA0 621 aa16.93■□□□□ 0.3
CIT-219ENST00000612548 LINC00301Q8NCQ3 95 aa16.93■□□□□ 0.3
CIT-219ENST00000612548 TANGO6Q9C0B7 1094 aa16.93■□□□□ 0.3
CIT-219ENST00000612548 PCDHA6Q9UN73 950 aa16.93■□□□□ 0.3
CIT-219ENST00000612548 PCDHA8Q9Y5H6 950 aa16.93■□□□□ 0.3
CIT-219ENST00000612548 MBD3O95983 291 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 TAL1P17542 331 aaPredicted RBP16.92■□□□□ 0.3
CIT-219ENST00000612548 ADCY7P51828 1080 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 HMGCS2P54868 508 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 USH1GQ495M9 461 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 FBXO11Q86XK2 927 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 AMNQ9BXJ7 453 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 ELP3Q9H9T3 547 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 NMRK2Q9NPI5 230 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 NOL7Q9UMY1 257 aaKnown RBP16.92■□□□□ 0.3
CIT-219ENST00000612548 AFG3L2Q9Y4W6 797 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 PCDHA1Q9Y5I3 950 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 CCDC194A0A1B0GVG4 234 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 FMR1Q06787 632 aaKnown RBP eCLIP16.92■□□□□ 0.31e-6■□□□□ 10.8
CIT-219ENST00000612548 CCDC174Q6PII3 467 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 LDHDQ86WU2 507 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 ANKRD13AQ8IZ07 590 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 BICD2Q8TD16 824 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 CLMNQ96JQ2 1002 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 PGBD1Q96JS3 809 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 RANBP17Q9H2T7 1088 aaKnown RBP16.92■□□□□ 0.3
CIT-219ENST00000612548 RPAP3Q9H6T3 665 aaPredicted RBP16.92■□□□□ 0.3
CIT-219ENST00000612548 ZNF408Q9H9D4 720 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 PCDHB6Q9Y5E3 794 aa16.92■□□□□ 0.3
CIT-219ENST00000612548 PTPRFP10586 1907 aa16.91■□□□□ 0.3
CIT-219ENST00000612548 GOLGA6L4A6NEF3 574 aa16.91■□□□□ 0.3
CIT-219ENST00000612548 SPTLC2O15270 562 aa16.91■□□□□ 0.3
CIT-219ENST00000612548 ME1P48163 572 aa16.91■□□□□ 0.3
CIT-219ENST00000612548 ARMC9Q7Z3E5 817 aa16.91■□□□□ 0.3
CIT-219ENST00000612548 REXO1Q8N1G1 1221 aaKnown RBP16.91■□□□□ 0.3
CIT-219ENST00000612548 KCNG4Q8TDN1 519 aa16.91■□□□□ 0.3
CIT-219ENST00000612548 SLF1Q9BQI6 1058 aa16.91■□□□□ 0.3
CIT-219ENST00000612548 SMCHD1A6NHR9 2005 aa16.91■□□□□ 0.3
CIT-219ENST00000612548 C19orf81C9J6K1 198 aa16.9■□□□□ 0.3
CIT-219ENST00000612548 WNT7AO00755 349 aa16.9■□□□□ 0.3
CIT-219ENST00000612548 PTPAQ15257 358 aa16.9■□□□□ 0.3
CIT-219ENST00000612548 MAP3K11Q16584 847 aa16.9■□□□□ 0.3
CIT-219ENST00000612548 JAKMIP3Q5VZ66 844 aa16.9■□□□□ 0.3
CIT-219ENST00000612548 CUL5Q93034 780 aa16.9■□□□□ 0.3
CIT-219ENST00000612548 C12orf42Q96LP6 360 aa16.9■□□□□ 0.3
CIT-219ENST00000612548 GZF1Q9H116 711 aaPredicted RBP16.9■□□□□ 0.3
CIT-219ENST00000612548 RIC8AQ9NPQ8 531 aa16.9■□□□□ 0.3
CIT-219ENST00000612548 TMOD4Q9NZQ9 345 aa16.9■□□□□ 0.3
CIT-219ENST00000612548 BIN2Q9UBW5 565 aaPredicted RBP16.9■□□□□ 0.3
CIT-219ENST00000612548 PARP14Q460N5 1801 aa16.9■□□□□ 0.3
CIT-219ENST00000612548 FLOT1O75955 427 aa16.89■□□□□ 0.3
CIT-219ENST00000612548 MARCKSP29966 332 aaPredicted RBP16.89■□□□□ 0.3
CIT-219ENST00000612548 SLC39A14Q15043 492 aa16.89■□□□□ 0.3
CIT-219ENST00000612548 UBE2SQ16763 222 aa16.89■□□□□ 0.3
CIT-219ENST00000612548 TMEM260Q9NX78 707 aa16.89■□□□□ 0.3
CIT-219ENST00000612548 INF2Q27J81 1249 aa16.89■□□□□ 0.29
CIT-219ENST00000612548 TTC38Q5R3I4 469 aa16.89■□□□□ 0.29
CIT-219ENST00000612548 CAVIN1Q6NZI2 390 aaKnown RBP16.89■□□□□ 0.29
CIT-219ENST00000612548 KRT25Q7Z3Z0 450 aa16.89■□□□□ 0.29
CIT-219ENST00000612548 PRPF38AQ8NAV1 312 aaKnown RBP16.89■□□□□ 0.29
CIT-219ENST00000612548 OTUD5Q96G74 571 aa16.89■□□□□ 0.29
CIT-219ENST00000612548 PSTPIP2Q9H939 334 aa16.89■□□□□ 0.29
CIT-219ENST00000612548 PCDHA7Q9UN72 937 aa16.89■□□□□ 0.29
CIT-219ENST00000612548 DEKP35659 375 aaKnown RBP16.88■□□□□ 0.29
CIT-219ENST00000612548 TRAPPC10P48553 1259 aa16.88■□□□□ 0.29
CIT-219ENST00000612548 MRPL12P52815 198 aaKnown RBP16.88■□□□□ 0.29
CIT-219ENST00000612548 ERO1BQ86YB8 467 aa16.88■□□□□ 0.29
CIT-219ENST00000612548 RBM46Q8TBY0 533 aaKnown RBP16.88■□□□□ 0.29
CIT-219ENST00000612548 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.88■□□□□ 0.29
CIT-219ENST00000612548 PPP1R9AQ9ULJ8 1098 aa16.88■□□□□ 0.29
CIT-219ENST00000612548 CEP131Q9UPN4 1083 aa16.88■□□□□ 0.29
CIT-219ENST00000612548 SPDYE5A6NIY4 337 aa16.87■□□□□ 0.29
CIT-219ENST00000612548 PPATQ06203 517 aa16.87■□□□□ 0.29
CIT-219ENST00000612548 NONOQ15233 471 aaKnown RBP eCLIP16.87■□□□□ 0.29
CIT-219ENST00000612548 ZNF174Q15697 407 aa16.87■□□□□ 0.29
CIT-219ENST00000612548 SH3D19Q5HYK7 790 aa16.87■□□□□ 0.29
CIT-219ENST00000612548 IRF6O14896 467 aa16.87■□□□□ 0.29
CIT-219ENST00000612548 PPP6R2O75170 966 aa16.87■□□□□ 0.29
CIT-219ENST00000612548 CLK2P49760 499 aaKnown RBP16.87■□□□□ 0.29
CIT-219ENST00000612548 JMYQ8N9B5 988 aa16.87■□□□□ 0.29
CIT-219ENST00000612548 RLFQ13129 1914 aa16.87■□□□□ 0.29
CIT-219ENST00000612548 LOC285556D6RIA3 1793 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms