RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 GJA8P48165 433 aa14.96□□□□□ -0.01
CD9-212ENST00000610354 SLC4A3P48751 1232 aa14.96□□□□□ -0.01
CD9-212ENST00000610354 OAZ1P54368 228 aa14.96□□□□□ -0.01
CD9-212ENST00000610354 IKQ13123 557 aaPredicted RBP14.96□□□□□ -0.01
CD9-212ENST00000610354 ZNF792Q3KQV3 632 aa14.96□□□□□ -0.01
CD9-212ENST00000610354 SYDE2Q5VT97 1194 aa14.96□□□□□ -0.01
CD9-212ENST00000610354 CCDC174Q6PII3 467 aa14.96□□□□□ -0.01
CD9-212ENST00000610354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.96□□□□□ -0.01
CD9-212ENST00000610354 DPP9Q86TI2 863 aa14.96□□□□□ -0.01
CD9-212ENST00000610354 TRMT44Q8IYL2 757 aaKnown RBP14.96□□□□□ -0.01
CD9-212ENST00000610354 TRPV1Q8NER1 839 aa14.96□□□□□ -0.01
CD9-212ENST00000610354 NCOA7Q8NI08 942 aa14.96□□□□□ -0.01
CD9-212ENST00000610354 MMP19Q99542 508 aa14.96□□□□□ -0.01
CD9-212ENST00000610354 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.96□□□□□ -0.01
CD9-212ENST00000610354 RANBP17Q9H2T7 1088 aaKnown RBP14.96□□□□□ -0.01
CD9-212ENST00000610354 KAT14Q9H8E8 782 aa14.96□□□□□ -0.01
CD9-212ENST00000610354 GPHNQ9NQX3 736 aaPredicted RBP14.96□□□□□ -0.01
CD9-212ENST00000610354 PDE4DIPQ5VU43 2346 aa14.95□□□□□ -0.02
CD9-212ENST00000610354 SGPL1O95470 568 aa14.95□□□□□ -0.02
CD9-212ENST00000610354 CCND3P30281 292 aaPredicted RBP14.95□□□□□ -0.02
CD9-212ENST00000610354 CYP2C19P33261 490 aa14.95□□□□□ -0.02
CD9-212ENST00000610354 COPB2P35606 906 aa14.95□□□□□ -0.02
CD9-212ENST00000610354 TRDNQ13061 729 aa14.95□□□□□ -0.02
CD9-212ENST00000610354 IGDCC4Q8TDY8 1250 aa14.95□□□□□ -0.02
CD9-212ENST00000610354 U2AF1L4Q8WU68 220 aaKnown RBP14.95□□□□□ -0.02
CD9-212ENST00000610354 MAML3Q96JK9 1138 aa14.95□□□□□ -0.02
CD9-212ENST00000610354 DEFB118Q96PH6 123 aa14.95□□□□□ -0.02
CD9-212ENST00000610354 UBAC1Q9BSL1 405 aa14.95□□□□□ -0.02
CD9-212ENST00000610354 UBA5Q9GZZ9 404 aa14.95□□□□□ -0.02
CD9-212ENST00000610354 LCTP09848 1927 aa14.95□□□□□ -0.02
CD9-212ENST00000610354 MCM3APO60318 1980 aa14.95□□□□□ -0.02
CD9-212ENST00000610354 FRMPD3Q5JV73 1810 aa14.94□□□□□ -0.02
CD9-212ENST00000610354 DNAJC25-GNG10A0A024R161 153 aa14.94□□□□□ -0.02
CD9-212ENST00000610354 IFIT3O14879 490 aaKnown RBP14.94□□□□□ -0.02
CD9-212ENST00000610354 MUM1L1Q5H9M0 696 aa14.94□□□□□ -0.02
CD9-212ENST00000610354 IFIT1BQ5T764 474 aaKnown RBP14.94□□□□□ -0.02
CD9-212ENST00000610354 OLFML2BQ68BL8 750 aa14.94□□□□□ -0.02
CD9-212ENST00000610354 UBE2Q1Q7Z7E8 422 aa14.94□□□□□ -0.02
CD9-212ENST00000610354 RASEFQ8IZ41 740 aa14.94□□□□□ -0.02
CD9-212ENST00000610354 FGD4Q96M96 766 aa14.94□□□□□ -0.02
CD9-212ENST00000610354 CRISPLD2Q9H0B8 497 aa14.94□□□□□ -0.02
CD9-212ENST00000610354 HMX1Q9NP08 348 aaPredicted RBP14.94□□□□□ -0.02
CD9-212ENST00000610354 CTDP1Q9Y5B0 961 aaPredicted RBP14.94□□□□□ -0.02
CD9-212ENST00000610354 BAZ2BQ9UIF8 2168 aaKnown RBP14.94□□□□□ -0.02
CD9-212ENST00000610354 MKI67P46013 3256 aaKnown RBP14.94□□□□□ -0.02
CD9-212ENST00000610354 KCTD2Q14681 263 aa14.93□□□□□ -0.02
CD9-212ENST00000610354 SLC35G1Q2M3R5 365 aa14.93□□□□□ -0.02
CD9-212ENST00000610354 RALYLQ86SE5 291 aaKnown RBP14.93□□□□□ -0.02
CD9-212ENST00000610354 STAG2Q8N3U4 1231 aa14.93□□□□□ -0.02
CD9-212ENST00000610354 CHST13Q8NET6 341 aa14.93□□□□□ -0.02
CD9-212ENST00000610354 HOMER2Q9NSB8 354 aa14.93□□□□□ -0.02
CD9-212ENST00000610354 RNF146Q9NTX7 359 aa14.93□□□□□ -0.02
CD9-212ENST00000610354 MYH6P13533 1939 aa14.93□□□□□ -0.02
CD9-212ENST00000610354 ICAM1P05362 532 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 ALAS1P13196 640 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 CYBAP13498 195 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 MNX1P50219 401 aaPredicted RBP14.92□□□□□ -0.02
CD9-212ENST00000610354 PRAMEF19Q5SWL8 479 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 GPATCH4Q5T3I0 446 aaKnown RBP14.92□□□□□ -0.02
CD9-212ENST00000610354 MFSD14CQ5VZR4 134 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 LHX8Q68G74 356 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 TRERF1Q96PN7 1200 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 MAD2L2Q9UI95 211 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 DIS3Q9Y2L1 958 aaKnown RBP14.92□□□□□ -0.02
CD9-212ENST00000610354 PRC1O43663 620 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 WTAPQ15007 396 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 TKFCQ3LXA3 575 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 ADCK5Q3MIX3 580 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 TSGA10IPQ3SY00 556 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 TMEM67Q5HYA8 995 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 CASC1Q6TDU7 716 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 ADGRF4Q8IZF3 695 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 KCNB2Q92953 911 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 ACAD9Q9H845 621 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 LY9Q9HBG7 655 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 A1CFQ9NQ94 594 aaKnown RBP14.92□□□□□ -0.02
CD9-212ENST00000610354 FBXO40Q9UH90 709 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 CCPG1Q9ULG6 757 aa14.92□□□□□ -0.02
CD9-212ENST00000610354 PALM3A6NDB9 673 aaPredicted RBP14.91□□□□□ -0.02
CD9-212ENST00000610354 SH2B2O14492 632 aaPredicted RBP14.91□□□□□ -0.02
CD9-212ENST00000610354 TFRCP02786 760 aaKnown RBP14.91□□□□□ -0.02
CD9-212ENST00000610354 PARP1P09874 1014 aaKnown RBP14.91□□□□□ -0.02
CD9-212ENST00000610354 CNTN2Q02246 1040 aa14.91□□□□□ -0.02
CD9-212ENST00000610354 TROAPQ12815 778 aa14.91□□□□□ -0.02
CD9-212ENST00000610354 ASPRV1Q53RT3 343 aa14.91□□□□□ -0.02
CD9-212ENST00000610354 CLEC4DQ8WXI8 215 aa14.91□□□□□ -0.02
CD9-212ENST00000610354 DDX11Q96FC9 970 aa14.91□□□□□ -0.02
CD9-212ENST00000610354 LRRC2Q9BYS8 371 aa14.91□□□□□ -0.02
CD9-212ENST00000610354 JMJD4Q9H9V9 463 aa14.91□□□□□ -0.02
CD9-212ENST00000610354 SLC5A4Q9NY91 659 aa14.91□□□□□ -0.02
CD9-212ENST00000610354 OGDHLQ9ULD0 1010 aa14.91□□□□□ -0.02
CD9-212ENST00000610354 ASTN1O14525 1302 aa14.9□□□□□ -0.02
CD9-212ENST00000610354 SOWAHBA6NEL2 793 aa14.9□□□□□ -0.02
CD9-212ENST00000610354 NFIBO00712 420 aa14.9□□□□□ -0.02
CD9-212ENST00000610354 SNAI1O95863 264 aaPredicted RBP14.9□□□□□ -0.02
CD9-212ENST00000610354 EXOSC10Q01780 885 aaKnown RBP14.9□□□□□ -0.02
CD9-212ENST00000610354 GRM4Q14833 912 aa14.9□□□□□ -0.02
CD9-212ENST00000610354 ANKRD35Q8N283 1001 aa14.9□□□□□ -0.02
CD9-212ENST00000610354 PIP4P2Q8N4L2 257 aa14.9□□□□□ -0.02
CD9-212ENST00000610354 FAM133AQ8N9E0 248 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms