RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 PANK1Q8TE04 598 aa20.75■□□□□ 0.91
CHMP4A-211ENST00000609024 UHRF1Q96T88 793 aaPredicted RBP20.75■□□□□ 0.91
CHMP4A-211ENST00000609024 HAUS7Q99871 368 aa20.75■□□□□ 0.91
CHMP4A-211ENST00000609024 RAVER2Q9HCJ3 691 aaKnown RBP20.75■□□□□ 0.91
CHMP4A-211ENST00000609024 IL23AQ9NPF7 189 aa20.75■□□□□ 0.91
CHMP4A-211ENST00000609024 NYAP2Q9P242 653 aa20.75■□□□□ 0.91
CHMP4A-211ENST00000609024 CLIP2Q9UDT6 1046 aa20.75■□□□□ 0.91
CHMP4A-211ENST00000609024 ZBED9Q6R2W3 1325 aa20.75■□□□□ 0.91
CHMP4A-211ENST00000609024 MINDY4BA8MYZ0 360 aa20.74■□□□□ 0.91
CHMP4A-211ENST00000609024 ATP2A1O14983 1001 aa20.74■□□□□ 0.91
CHMP4A-211ENST00000609024 NDUFB10O96000 172 aa20.74■□□□□ 0.91
CHMP4A-211ENST00000609024 ARMCX2Q7L311 632 aa20.74■□□□□ 0.91
CHMP4A-211ENST00000609024 FAM126BQ8IXS8 530 aa20.74■□□□□ 0.91
CHMP4A-211ENST00000609024 ZNF444Q8N0Y2 327 aaPredicted RBP20.74■□□□□ 0.91
CHMP4A-211ENST00000609024 UPF3AQ9H1J1 476 aaKnown RBP20.74■□□□□ 0.91
CHMP4A-211ENST00000609024 FEM1BQ9UK73 627 aa20.74■□□□□ 0.91
CHMP4A-211ENST00000609024 ZEB2O60315 1214 aa20.73■□□□□ 0.91
CHMP4A-211ENST00000609024 CYP2C18P33260 490 aa20.73■□□□□ 0.91
CHMP4A-211ENST00000609024 RASIP1Q5U651 963 aa20.73■□□□□ 0.91
CHMP4A-211ENST00000609024 HERVK_113Q902F9 699 aa20.73■□□□□ 0.91
CHMP4A-211ENST00000609024 AP5M1Q9H0R1 490 aa20.73■□□□□ 0.91
CHMP4A-211ENST00000609024 HIPK3Q9H422 1215 aa20.73■□□□□ 0.91
CHMP4A-211ENST00000609024 HOMER2Q9NSB8 354 aa20.73■□□□□ 0.91
CHMP4A-211ENST00000609024 CABYRO75952 493 aa20.72■□□□□ 0.91
CHMP4A-211ENST00000609024 OAZ1P54368 228 aa20.72■□□□□ 0.91
CHMP4A-211ENST00000609024 IRX5P78411 483 aaPredicted RBP20.72■□□□□ 0.91
CHMP4A-211ENST00000609024 TNFAIP2Q03169 654 aa20.72■□□□□ 0.91
CHMP4A-211ENST00000609024 CCDC144CPQ8IYA2 1237 aa20.72■□□□□ 0.91
CHMP4A-211ENST00000609024 NKX2-4Q9H2Z4 354 aa20.72■□□□□ 0.91
CHMP4A-211ENST00000609024 RASA1P20936 1047 aa20.71■□□□□ 0.91
CHMP4A-211ENST00000609024 HNRNPUQ00839 825 aaKnown RBP eCLIP20.71■□□□□ 0.91
CHMP4A-211ENST00000609024 BEX3Q00994 111 aa20.71■□□□□ 0.91
CHMP4A-211ENST00000609024 IKQ13123 557 aaPredicted RBP20.71■□□□□ 0.91
CHMP4A-211ENST00000609024 OTOP2Q7RTS6 562 aa20.71■□□□□ 0.91
CHMP4A-211ENST00000609024 RPUSD2Q8IZ73 545 aaKnown RBP20.71■□□□□ 0.91
CHMP4A-211ENST00000609024 MICALL1Q8N3F8 863 aa20.71■□□□□ 0.91
CHMP4A-211ENST00000609024 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.71■□□□□ 0.91
CHMP4A-211ENST00000609024 PUS7LQ9H0K6 701 aaKnown RBP20.71■□□□□ 0.91
CHMP4A-211ENST00000609024 CHMP4BQ9H444 224 aaKnown RBP20.71■□□□□ 0.91
CHMP4A-211ENST00000609024 SLC38A10Q9HBR0 1119 aa20.71■□□□□ 0.91
CHMP4A-211ENST00000609024 ADCY6O43306 1168 aa20.7■□□□□ 0.9
CHMP4A-211ENST00000609024 FDX1P10109 184 aa20.7■□□□□ 0.9
CHMP4A-211ENST00000609024 SBK1Q52WX2 424 aa20.7■□□□□ 0.9
CHMP4A-211ENST00000609024 CXCL17Q6UXB2 119 aa20.7■□□□□ 0.9
CHMP4A-211ENST00000609024 SEZ6LQ9BYH1 1024 aa20.7■□□□□ 0.9
CHMP4A-211ENST00000609024 ACAD9Q9H845 621 aa20.7■□□□□ 0.9
CHMP4A-211ENST00000609024 COG6Q9Y2V7 657 aa20.7■□□□□ 0.9
CHMP4A-211ENST00000609024 ASB14A6NK59 587 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 ZBBXA8MT70 800 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 CD4P01730 458 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 APPP05067 770 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 TDO2P48775 406 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 ITGA7Q13683 1181 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 ADGRE1Q14246 886 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 SKIV2LQ15477 1246 aaKnown RBP20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 AAK1Q2M2I8 961 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 PPP2R2DQ66LE6 453 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 GIMAP6Q6P9H5 292 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 TLK2Q86UE8 772 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 DDX19BQ9UMR2 479 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 SLC4A7Q9Y6M7 1214 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 MYO9BQ13459 2157 aa20.69■□□□□ 0.9
CHMP4A-211ENST00000609024 MYH7P12883 1935 aa20.68■□□□□ 0.9
CHMP4A-211ENST00000609024 TTLL1O95922 423 aa20.68■□□□□ 0.9
CHMP4A-211ENST00000609024 CHGBP05060 677 aa20.68■□□□□ 0.9
CHMP4A-211ENST00000609024 CCL23P55773 120 aa20.68■□□□□ 0.9
CHMP4A-211ENST00000609024 FSCN1Q16658 493 aaKnown RBP20.68■□□□□ 0.9
CHMP4A-211ENST00000609024 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.68■□□□□ 0.9
CHMP4A-211ENST00000609024 FAM122AQ96E09 287 aa20.68■□□□□ 0.9
CHMP4A-211ENST00000609024 CXXC1Q9P0U4 656 aaPredicted RBP20.68■□□□□ 0.9
CHMP4A-211ENST00000609024 BMP3P12645 472 aa20.67■□□□□ 0.9
CHMP4A-211ENST00000609024 STAT2P52630 851 aa20.67■□□□□ 0.9
CHMP4A-211ENST00000609024 CNTN2Q02246 1040 aa20.67■□□□□ 0.9
CHMP4A-211ENST00000609024 SLFN13Q68D06 897 aa20.67■□□□□ 0.9
CHMP4A-211ENST00000609024 LRRC47Q8N1G4 583 aaKnown RBP20.67■□□□□ 0.9
CHMP4A-211ENST00000609024 STRBPQ96SI9 672 aaKnown RBP20.67■□□□□ 0.9
CHMP4A-211ENST00000609024 SYNPO2Q9UMS6 1093 aa20.67■□□□□ 0.9
CHMP4A-211ENST00000609024 MCM3APO60318 1980 aa20.66■□□□□ 0.9
CHMP4A-211ENST00000609024 TMEM232C9JQI7 657 aa20.66■□□□□ 0.9
CHMP4A-211ENST00000609024 DYNC1LI2O43237 492 aaPredicted RBP20.66■□□□□ 0.9
CHMP4A-211ENST00000609024 TSPY3P0CV98 308 aa20.66■□□□□ 0.9
CHMP4A-211ENST00000609024 TSPY8P0CW00 308 aa20.66■□□□□ 0.9
CHMP4A-211ENST00000609024 GMCL1P1Q8NEA9 526 aa20.66■□□□□ 0.9
CHMP4A-211ENST00000609024 CHURC1Q8WUH1 139 aa20.66■□□□□ 0.9
CHMP4A-211ENST00000609024 MKL1Q969V6 931 aa20.66■□□□□ 0.9
CHMP4A-211ENST00000609024 CEP95Q96GE4 821 aa20.66■□□□□ 0.9
CHMP4A-211ENST00000609024 LRRCC1Q9C099 1032 aa20.66■□□□□ 0.9
CHMP4A-211ENST00000609024 RNF146Q9NTX7 359 aa20.66■□□□□ 0.9
CHMP4A-211ENST00000609024 RAPGEFL1Q9UHV5 662 aa20.66■□□□□ 0.9
CHMP4A-211ENST00000609024 MYH4Q9Y623 1939 aa20.65■□□□□ 0.9
CHMP4A-211ENST00000609024 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.65■□□□□ 0.9
CHMP4A-211ENST00000609024 GSG1L2A8MUP6 293 aa20.65■□□□□ 0.9
CHMP4A-211ENST00000609024 GTPBP6O43824 516 aaPredicted RBP20.65■□□□□ 0.9
CHMP4A-211ENST00000609024 PRDM1O75626 825 aa20.65■□□□□ 0.9
CHMP4A-211ENST00000609024 SLC3A2P08195 630 aaKnown RBP20.65■□□□□ 0.9
CHMP4A-211ENST00000609024 GNAT2P19087 354 aa20.65■□□□□ 0.9
CHMP4A-211ENST00000609024 RABGGTBP53611 331 aa20.65■□□□□ 0.9
CHMP4A-211ENST00000609024 NKX3-2P78367 333 aa20.65■□□□□ 0.9
CHMP4A-211ENST00000609024 FAM160B2Q86V87 743 aa20.65■□□□□ 0.9
CHMP4A-211ENST00000609024 GPATCH3Q96I76 525 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms