RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 SPTLC2O15270 562 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 NR1D1P20393 614 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 G3BP1Q13283 466 aaKnown RBP eCLIP13.24□□□□□ -0.29
CTCFL-217ENST00000608425 LRRC23Q53EV4 343 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-217ENST00000608425 MTHFD1LQ6UB35 978 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 KDM7AQ6ZMT4 941 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 ZNF589Q86UQ0 364 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-217ENST00000608425 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 SMARCAL1Q9NZC9 954 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 C2CD2Q9Y426 696 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 PCDHA5Q9Y5H7 936 aa13.24□□□□□ -0.29
CTCFL-217ENST00000608425 COL14A1Q05707 1796 aaKnown RBP13.24□□□□□ -0.29
CTCFL-217ENST00000608425 SETSIPP0DME0 302 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 RABL6Q3YEC7 729 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-217ENST00000608425 CCDC178Q5BJE1 867 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 TRIM68Q6AZZ1 485 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 OLFM4Q6UX06 510 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 TEKT4Q8WW24 435 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 L3MBTL3Q96JM7 780 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-217ENST00000608425 PANX2Q96RD6 677 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 TARSL2A2RTX5 802 aaKnown RBP13.23□□□□□ -0.29
CTCFL-217ENST00000608425 CAPN15O75808 1086 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 SASH1O94885 1247 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 CHGBP05060 677 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 MCM3P25205 808 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 TMOD1P28289 359 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 IFFO1Q0D2I5 559 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 NAA16Q6N069 864 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-217ENST00000608425 GALNT15Q8N3T1 639 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 ATL2Q8NHH9 583 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 BICD1Q96G01 975 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 SEC16BQ96JE7 1060 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 MTRQ99707 1265 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 SLX1AQ9BQ83 275 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 COPRSQ9NQ92 184 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 SAR1BQ9Y6B6 198 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 COL22A1Q8NFW1 1626 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-217ENST00000608425 HSF2BPO75031 334 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 NR1I3Q14994 352 aa13.23□□□□□ -0.29
CTCFL-217ENST00000608425 A8MUI8 341 aa13.22□□□□□ -0.29
CTCFL-217ENST00000608425 PES1O00541 588 aaKnown RBP13.22□□□□□ -0.29
CTCFL-217ENST00000608425 EPB41P11171 864 aaKnown RBP13.22□□□□□ -0.29
CTCFL-217ENST00000608425 NBPF14Q5TI25 921 aa13.22□□□□□ -0.29
CTCFL-217ENST00000608425 AACSQ86V21 672 aa13.22□□□□□ -0.29
CTCFL-217ENST00000608425 METTL16Q86W50 562 aaKnown RBP13.22□□□□□ -0.29
CTCFL-217ENST00000608425 PPFIBP1Q86W92 1011 aa13.22□□□□□ -0.29
CTCFL-217ENST00000608425 EVI5LQ96CN4 794 aa13.22□□□□□ -0.29
CTCFL-217ENST00000608425 THRAP3Q9Y2W1 955 aaKnown RBP13.22□□□□□ -0.29
CTCFL-217ENST00000608425 LRP6O75581 1613 aa13.22□□□□□ -0.29
CTCFL-217ENST00000608425 WNK3Q9BYP7 1800 aa13.22□□□□□ -0.29
CTCFL-217ENST00000608425 ZNF18P17022 549 aa13.22□□□□□ -0.29
CTCFL-217ENST00000608425 POLD1P28340 1107 aa13.22□□□□□ -0.29
CTCFL-217ENST00000608425 SYKP43405 635 aa13.22□□□□□ -0.29
CTCFL-217ENST00000608425 BRAPQ7Z569 592 aa13.22□□□□□ -0.29
CTCFL-217ENST00000608425 ERICH1Q86X53 443 aa13.22□□□□□ -0.29
CTCFL-217ENST00000608425 EHBP1Q8NDI1 1231 aa13.22□□□□□ -0.29
CTCFL-217ENST00000608425 LRRC10BA6NIK2 292 aa13.21□□□□□ -0.29
CTCFL-217ENST00000608425 EVI5O60447 810 aa13.21□□□□□ -0.29
CTCFL-217ENST00000608425 COBLO75128 1261 aa13.21□□□□□ -0.29
CTCFL-217ENST00000608425 FAM153BP0C7A2 387 aa13.21□□□□□ -0.29
CTCFL-217ENST00000608425 POLE2P56282 527 aa13.21□□□□□ -0.29
CTCFL-217ENST00000608425 KCTD19Q17RG1 926 aaPredicted RBP13.21□□□□□ -0.29
CTCFL-217ENST00000608425 FAM153CQ494X1 144 aa13.21□□□□□ -0.29
CTCFL-217ENST00000608425 CCDC43Q96MW1 224 aaKnown RBP13.21□□□□□ -0.29
CTCFL-217ENST00000608425 CHP1Q99653 195 aa13.21□□□□□ -0.29
CTCFL-217ENST00000608425 EHD2Q9NZN4 543 aa13.21□□□□□ -0.29
CTCFL-217ENST00000608425 FAM153AQ9UHL3 310 aa13.21□□□□□ -0.29
CTCFL-217ENST00000608425 TTF2Q9UNY4 1162 aaKnown RBP13.21□□□□□ -0.29
CTCFL-217ENST00000608425 REXO2Q9Y3B8 237 aaKnown RBP13.21□□□□□ -0.29
CTCFL-217ENST00000608425 HIP1O00291 1037 aa13.21□□□□□ -0.3
CTCFL-217ENST00000608425 PAX3P23760 479 aa13.21□□□□□ -0.3
CTCFL-217ENST00000608425 MXRA7P84157 204 aa13.21□□□□□ -0.3
CTCFL-217ENST00000608425 MYBPC3Q14896 1274 aa13.21□□□□□ -0.3
CTCFL-217ENST00000608425 JAKMIP2Q96AA8 810 aa13.21□□□□□ -0.3
CTCFL-217ENST00000608425 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.3
CTCFL-217ENST00000608425 NOP53Q9NZM5 478 aaKnown RBP13.21□□□□□ -0.3
CTCFL-217ENST00000608425 AHDC1Q5TGY3 1603 aaPredicted RBP13.21□□□□□ -0.3
CTCFL-217ENST00000608425 PHF20L1A8MW92 1017 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 N4BP3O15049 544 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 MAFGO15525 162 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 MFAP3LO75121 409 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 CASP7P55210 303 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 SLC9C2Q5TAH2 1124 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 CCT6BQ92526 530 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 EAF2Q96CJ1 260 aaPredicted RBP13.2□□□□□ -0.3
CTCFL-217ENST00000608425 LNPEPQ9UIQ6 1025 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 ITGB4P16144 1822 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 MYH8P13535 1937 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 PPIP5K2O43314 1243 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 GYPCP04921 128 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 CUL3Q13618 768 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 DBN1Q16643 649 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 EPHA10Q5JZY3 1008 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 CCDC102BQ68D86 513 aa13.2□□□□□ -0.3
CTCFL-217ENST00000608425 NBPF26B4DH59 902 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 PDHA1P08559 390 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 ALDH1B1P30837 517 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 RFX5P48382 616 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-217ENST00000608425 STX17P56962 302 aa13.19□□□□□ -0.3
CTCFL-217ENST00000608425 MEX3CQ5U5Q3 659 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms