RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 TRIM6-TRIM34B2RNG4 842 aa15.76■□□□□ 0.11
CTSA-213ENST00000606782 SOX1O00570 391 aaPredicted RBP15.76■□□□□ 0.11
CTSA-213ENST00000606782 RANBP6O60518 1105 aaKnown RBP15.76■□□□□ 0.11
CTSA-213ENST00000606782 ATN1P54259 1190 aaPredicted RBP15.76■□□□□ 0.11
CTSA-213ENST00000606782 RTP1P59025 263 aa15.76■□□□□ 0.11
CTSA-213ENST00000606782 TKFCQ3LXA3 575 aa15.76■□□□□ 0.11
CTSA-213ENST00000606782 RILPL2Q969X0 211 aa15.76■□□□□ 0.11
CTSA-213ENST00000606782 XPNPEP3Q9NQH7 507 aa15.76■□□□□ 0.11
CTSA-213ENST00000606782 ADCYAP1R1P41586 468 aa15.75■□□□□ 0.11
CTSA-213ENST00000606782 NT5C2P49902 561 aa15.75■□□□□ 0.11
CTSA-213ENST00000606782 MFAP1P55081 439 aaKnown RBP15.75■□□□□ 0.11
CTSA-213ENST00000606782 BMP2KLQ5H9B9 411 aa15.75■□□□□ 0.11
CTSA-213ENST00000606782 BTNL9Q6UXG8 535 aa15.75■□□□□ 0.11
CTSA-213ENST00000606782 RNF180Q86T96 592 aa15.75■□□□□ 0.11
CTSA-213ENST00000606782 TDHQ8IZJ6 230 aa15.75■□□□□ 0.11
CTSA-213ENST00000606782 ANKRD35Q8N283 1001 aa15.75■□□□□ 0.11
CTSA-213ENST00000606782 FAM133AQ8N9E0 248 aa15.75■□□□□ 0.11
CTSA-213ENST00000606782 TTC14Q96N46 770 aa15.75■□□□□ 0.11
CTSA-213ENST00000606782 TSEN34Q9BSV6 310 aaKnown RBP15.75■□□□□ 0.11
CTSA-213ENST00000606782 UBE2OQ9C0C9 1292 aaKnown RBP15.75■□□□□ 0.11
CTSA-213ENST00000606782 ADAMTS4O75173 837 aa15.74■□□□□ 0.11
CTSA-213ENST00000606782 TOP1P11387 765 aaKnown RBP15.74■□□□□ 0.11
CTSA-213ENST00000606782 AKNAD1Q5T1N1 836 aa15.74■□□□□ 0.11
CTSA-213ENST00000606782 KCTD1Q719H9 257 aa15.74■□□□□ 0.11
CTSA-213ENST00000606782 KLHDC9Q8NEP7 349 aa15.74■□□□□ 0.11
CTSA-213ENST00000606782 DCAF4Q8WV16 495 aa15.74■□□□□ 0.11
CTSA-213ENST00000606782 AGBL1Q96MI9 1066 aa15.74■□□□□ 0.11
CTSA-213ENST00000606782 ABHD16BQ9H3Z7 469 aa15.74■□□□□ 0.11
CTSA-213ENST00000606782 ACAD9Q9H845 621 aa15.74■□□□□ 0.11
CTSA-213ENST00000606782 FAM184BQ9ULE4 1060 aa15.74■□□□□ 0.11
CTSA-213ENST00000606782 PRR12Q9ULL5 1215 aa15.74■□□□□ 0.11
CTSA-213ENST00000606782 DNAH12Q6ZR08 3092 aa15.74■□□□□ 0.11
CTSA-213ENST00000606782 DUSP11O75319 330 aaKnown RBP15.73■□□□□ 0.11
CTSA-213ENST00000606782 PGK1P00558 417 aa15.73■□□□□ 0.11
CTSA-213ENST00000606782 CST5P28325 142 aaPredicted RBP15.73■□□□□ 0.11
CTSA-213ENST00000606782 NKX3-2P78367 333 aa15.73■□□□□ 0.11
CTSA-213ENST00000606782 ACVR2BQ13705 512 aa15.73■□□□□ 0.11
CTSA-213ENST00000606782 CCSAPQ6IQ19 270 aaPredicted RBP15.73■□□□□ 0.11
CTSA-213ENST00000606782 LRCH3Q96II8 777 aa15.73■□□□□ 0.11
CTSA-213ENST00000606782 TMEM47Q9BQJ4 181 aa15.73■□□□□ 0.11
CTSA-213ENST00000606782 KATNBL1Q9H079 304 aa15.73■□□□□ 0.11
CTSA-213ENST00000606782 A1CFQ9NQ94 594 aaKnown RBP15.73■□□□□ 0.11
CTSA-213ENST00000606782 RNF146Q9NTX7 359 aa15.73■□□□□ 0.11
CTSA-213ENST00000606782 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.73■□□□□ 0.11
CTSA-213ENST00000606782 HIP1O00291 1037 aa15.72■□□□□ 0.11
CTSA-213ENST00000606782 SLC4A3P48751 1232 aa15.72■□□□□ 0.11
CTSA-213ENST00000606782 MDM2Q00987 491 aaPredicted RBP15.72■□□□□ 0.11
CTSA-213ENST00000606782 CNTN2Q02246 1040 aa15.72■□□□□ 0.11
CTSA-213ENST00000606782 TRIM60Q495X7 471 aa15.72■□□□□ 0.11
CTSA-213ENST00000606782 MFSD6Q6ZSS7 791 aa15.72■□□□□ 0.11
CTSA-213ENST00000606782 ARMCX2Q7L311 632 aa15.72■□□□□ 0.11
CTSA-213ENST00000606782 RASGRP2Q7LDG7 609 aa15.72■□□□□ 0.11
CTSA-213ENST00000606782 TRERF1Q96PN7 1200 aa15.72■□□□□ 0.11
CTSA-213ENST00000606782 RANBP17Q9H2T7 1088 aaKnown RBP15.72■□□□□ 0.11
CTSA-213ENST00000606782 RNF41Q9H4P4 317 aaPredicted RBP15.72■□□□□ 0.11
CTSA-213ENST00000606782 ATP11BQ9Y2G3 1177 aa15.72■□□□□ 0.11
CTSA-213ENST00000606782 MCM3APO60318 1980 aa15.72■□□□□ 0.11
CTSA-213ENST00000606782 SYNRGQ9UMZ2 1314 aa15.71■□□□□ 0.11
CTSA-213ENST00000606782 POTEB2H3BUK9 544 aa15.71■□□□□ 0.11
CTSA-213ENST00000606782 ICAM1P05362 532 aa15.71■□□□□ 0.11
CTSA-213ENST00000606782 SNHG28P0DPA3 235 aa15.71■□□□□ 0.11
CTSA-213ENST00000606782 HAND2P61296 217 aa15.71■□□□□ 0.11
CTSA-213ENST00000606782 IKQ13123 557 aaPredicted RBP15.71■□□□□ 0.11
CTSA-213ENST00000606782 TBC1D10CQ8IV04 446 aa15.71■□□□□ 0.11
CTSA-213ENST00000606782 FERMT2Q96AC1 680 aa15.71■□□□□ 0.11
CTSA-213ENST00000606782 LBHD1Q9BQE6 289 aaPredicted RBP15.71■□□□□ 0.11
CTSA-213ENST00000606782 UPF3AQ9H1J1 476 aaKnown RBP15.71■□□□□ 0.11
CTSA-213ENST00000606782 TOMM22Q9NS69 142 aa15.71■□□□□ 0.11
CTSA-213ENST00000606782 HOMER2Q9NSB8 354 aa15.71■□□□□ 0.11
CTSA-213ENST00000606782 PRKAG2Q9UGJ0 569 aa15.71■□□□□ 0.11
CTSA-213ENST00000606782 A0A1W2PQ45 241 aaPredicted RBP15.7■□□□□ 0.1
CTSA-213ENST00000606782 A0A1W2PQY0 241 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 SOWAHBA6NEL2 793 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 MOXD2PA6NHM9 499 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 ADCY6O43306 1168 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 MYCNP04198 464 aaPredicted RBP15.7■□□□□ 0.1
CTSA-213ENST00000606782 ALAS1P13196 640 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 GJA9P57773 515 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 TLE2Q04725 743 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 CCDC144BQ3MJ40 725 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 RRP12Q5JTH9 1297 aaKnown RBP15.7■□□□□ 0.1
CTSA-213ENST00000606782 TTBK2Q6IQ55 1244 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 DGKHQ86XP1 1220 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 CCDC144CPQ8IYA2 1237 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 LENG1Q96BZ8 264 aaPredicted RBP15.7■□□□□ 0.1
CTSA-213ENST00000606782 TOX2Q96NM4 488 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 DSCC1Q9BVC3 393 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 PDLIM7Q9NR12 457 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 CYP39A1Q9NYL5 469 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 ZHX1Q9UKY1 873 aaPredicted RBP15.7■□□□□ 0.1
CTSA-213ENST00000606782 ISY1Q9ULR0 285 aaKnown RBP15.7■□□□□ 0.1
CTSA-213ENST00000606782 LTBP2Q14767 1821 aa15.7■□□□□ 0.1
CTSA-213ENST00000606782 ASTN1O14525 1302 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 TRIM43BA6NCK2 446 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 ASB14A6NK59 587 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 ZNF213O14771 459 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 PDHBP11177 359 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 CHMLP26374 656 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 ACLYP53396 1101 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 CCDC96Q2M329 555 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms