RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 CRISPLD2Q9H0B8 497 aa15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 RANBP17Q9H2T7 1088 aaKnown RBP15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 SENP2Q9HC62 589 aa15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 HMX1Q9NP08 348 aaPredicted RBP15.01□□□□□ -0.01
SHROOM1-207ENST00000606676 DNAJC25-GNG10A0A024R161 153 aa15□□□□□ -0.01
SHROOM1-207ENST00000606676 CCND3P30281 292 aaPredicted RBP15□□□□□ -0.01
SHROOM1-207ENST00000606676 KCTD2Q14681 263 aa15□□□□□ -0.01
SHROOM1-207ENST00000606676 IFIT1BQ5T764 474 aaKnown RBP15□□□□□ -0.01
SHROOM1-207ENST00000606676 MFSD14CQ5VZR4 134 aa15□□□□□ -0.01
SHROOM1-207ENST00000606676 CCDC174Q6PII3 467 aa15□□□□□ -0.01
SHROOM1-207ENST00000606676 CASC1Q6TDU7 716 aa15□□□□□ -0.01
SHROOM1-207ENST00000606676 UBE2Q1Q7Z7E8 422 aa15□□□□□ -0.01
SHROOM1-207ENST00000606676 RALYLQ86SE5 291 aaKnown RBP15□□□□□ -0.01
SHROOM1-207ENST00000606676 CHST13Q8NET6 341 aa15□□□□□ -0.01
SHROOM1-207ENST00000606676 MAML3Q96JK9 1138 aa15□□□□□ -0.01
SHROOM1-207ENST00000606676 CPVLQ9H3G5 476 aa15□□□□□ -0.01
SHROOM1-207ENST00000606676 TAL1P17542 331 aaPredicted RBP14.99□□□□□ -0.01
SHROOM1-207ENST00000606676 GPATCH4Q5T3I0 446 aaKnown RBP14.99□□□□□ -0.01
SHROOM1-207ENST00000606676 TRPV1Q8NER1 839 aa14.99□□□□□ -0.01
SHROOM1-207ENST00000606676 IGDCC4Q8TDY8 1250 aa14.99□□□□□ -0.01
SHROOM1-207ENST00000606676 HOMER2Q9NSB8 354 aa14.99□□□□□ -0.01
SHROOM1-207ENST00000606676 SLC5A4Q9NY91 659 aa14.99□□□□□ -0.01
SHROOM1-207ENST00000606676 DIS3Q9Y2L1 958 aaKnown RBP14.99□□□□□ -0.01
SHROOM1-207ENST00000606676 IFIT3O14879 490 aaKnown RBP14.98□□□□□ -0.01
SHROOM1-207ENST00000606676 ICAM1P05362 532 aa14.98□□□□□ -0.01
SHROOM1-207ENST00000606676 TKFCQ3LXA3 575 aa14.98□□□□□ -0.01
SHROOM1-207ENST00000606676 LHX8Q68G74 356 aa14.98□□□□□ -0.01
SHROOM1-207ENST00000606676 TRERF1Q96PN7 1200 aa14.98□□□□□ -0.01
SHROOM1-207ENST00000606676 UBA5Q9GZZ9 404 aa14.98□□□□□ -0.01
SHROOM1-207ENST00000606676 RNF146Q9NTX7 359 aa14.98□□□□□ -0.01
SHROOM1-207ENST00000606676 FBXO40Q9UH90 709 aa14.98□□□□□ -0.01
SHROOM1-207ENST00000606676 TFRCP02786 760 aaKnown RBP14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 ALAS1P13196 640 aa14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 CYBAP13498 195 aa14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 ASPRV1Q53RT3 343 aa14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 MUM1L1Q5H9M0 696 aa14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 RASEFQ8IZ41 740 aa14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 ANKRD35Q8N283 1001 aa14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 STAG2Q8N3U4 1231 aa14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 DDX11Q96FC9 970 aa14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 FGD4Q96M96 766 aa14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 TINF2Q9BSI4 451 aa14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 ACAD9Q9H845 621 aa14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 GPHNQ9NQX3 736 aaPredicted RBP14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 CCPG1Q9ULG6 757 aa14.97□□□□□ -0.01
SHROOM1-207ENST00000606676 PARP1P09874 1014 aaKnown RBP14.96□□□□□ -0.01
SHROOM1-207ENST00000606676 CAPN2P17655 700 aa14.96□□□□□ -0.01
SHROOM1-207ENST00000606676 MNX1P50219 401 aaPredicted RBP14.96□□□□□ -0.01
SHROOM1-207ENST00000606676 TROAPQ12815 778 aa14.96□□□□□ -0.01
SHROOM1-207ENST00000606676 WTAPQ15007 396 aa14.96□□□□□ -0.01
SHROOM1-207ENST00000606676 TMEM67Q5HYA8 995 aa14.96□□□□□ -0.01
SHROOM1-207ENST00000606676 PRAMEF19Q5SWL8 479 aa14.96□□□□□ -0.01
SHROOM1-207ENST00000606676 ADGRF4Q8IZF3 695 aa14.96□□□□□ -0.01
SHROOM1-207ENST00000606676 LY9Q9HBG7 655 aa14.96□□□□□ -0.01
SHROOM1-207ENST00000606676 A1CFQ9NQ94 594 aaKnown RBP14.96□□□□□ -0.01
SHROOM1-207ENST00000606676 MAD2L2Q9UI95 211 aa14.96□□□□□ -0.01
SHROOM1-207ENST00000606676 OGDHLQ9ULD0 1010 aa14.96□□□□□ -0.01
SHROOM1-207ENST00000606676 DNAH12Q6ZR08 3092 aa14.95□□□□□ -0.02
SHROOM1-207ENST00000606676 ERICH2A1L162 156 aa14.95□□□□□ -0.02
SHROOM1-207ENST00000606676 PALM3A6NDB9 673 aaPredicted RBP14.95□□□□□ -0.02
SHROOM1-207ENST00000606676 PRC1O43663 620 aa14.95□□□□□ -0.02
SHROOM1-207ENST00000606676 MCM5P33992 734 aa14.95□□□□□ -0.02
SHROOM1-207ENST00000606676 SART3Q15020 963 aaKnown RBP14.95□□□□□ -0.02
SHROOM1-207ENST00000606676 TSGA10IPQ3SY00 556 aa14.95□□□□□ -0.02
SHROOM1-207ENST00000606676 RNF20Q5VTR2 975 aa14.95□□□□□ -0.02
SHROOM1-207ENST00000606676 MAMDC4Q6UXC1 1216 aa14.95□□□□□ -0.02
SHROOM1-207ENST00000606676 FAM133AQ8N9E0 248 aa14.95□□□□□ -0.02
SHROOM1-207ENST00000606676 MTA3Q9BTC8 594 aa14.95□□□□□ -0.02
SHROOM1-207ENST00000606676 JMJD4Q9H9V9 463 aa14.95□□□□□ -0.02
SHROOM1-207ENST00000606676 ZNFX1Q9P2E3 1918 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 SH2B2O14492 632 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 FARP2O94887 1054 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 SNAI1O95863 264 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 CNTN2Q02246 1040 aa14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 GRM4Q14833 912 aa14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 SLC35G1Q2M3R5 365 aa14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 ADCK5Q3MIX3 580 aa14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 ZNF467Q7Z7K2 595 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 MSL3Q8N5Y2 521 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 CLEC4DQ8WXI8 215 aa14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 KCNB2Q92953 911 aa14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 CYP39A1Q9NYL5 469 aa14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 DDX20Q9UHI6 824 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-207ENST00000606676 PFASO15067 1338 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 WDR19Q8NEZ3 1342 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 SYNGAP1Q96PV0 1343 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 SOWAHBA6NEL2 793 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 KLRF2D3W0D1 207 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 POTEB2H3BUK9 544 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 NFIBO00712 420 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 SEPT4O43236 478 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 ZNF865P0CJ78 1059 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 CNGA1P29973 690 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 EXOSC10Q01780 885 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 CDC37Q16543 378 aaPredicted RBP14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 ANKLE1Q8NAG6 615 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 DIS3LQ8TF46 1054 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 MTMR8Q96EF0 704 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 TMEM87BQ96K49 555 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 NEK1Q96PY6 1258 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms