RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 SH3TC2Q8TF17 1288 aa16.62■□□□□ 0.25
CTSA-211ENST00000606066 PORCNQ9H237 461 aa16.62■□□□□ 0.25
CTSA-211ENST00000606066 SRRDQ9UH36 339 aa16.62■□□□□ 0.25
CTSA-211ENST00000606066 MAD2L2Q9UI95 211 aa16.62■□□□□ 0.25
CTSA-211ENST00000606066 IVNS1ABPQ9Y6Y0 642 aa16.62■□□□□ 0.25
CTSA-211ENST00000606066 KLRF2D3W0D1 207 aa16.61■□□□□ 0.25
CTSA-211ENST00000606066 STRNO43815 780 aa16.61■□□□□ 0.25
CTSA-211ENST00000606066 DHX16O60231 1041 aaKnown RBP16.61■□□□□ 0.25
CTSA-211ENST00000606066 ERCC3P19447 782 aa16.61■□□□□ 0.25
CTSA-211ENST00000606066 CTGFP29279 349 aa16.61■□□□□ 0.25
CTSA-211ENST00000606066 SNRNP48Q6IEG0 339 aaKnown RBP16.61■□□□□ 0.25
CTSA-211ENST00000606066 GPR142Q7Z601 462 aa16.61■□□□□ 0.25
CTSA-211ENST00000606066 SOCS4Q8WXH5 440 aa16.61■□□□□ 0.25
CTSA-211ENST00000606066 IL17RAQ96F46 866 aa16.61■□□□□ 0.25
CTSA-211ENST00000606066 LZTS2Q9BRK4 669 aa16.61■□□□□ 0.25
CTSA-211ENST00000606066 UBA5Q9GZZ9 404 aa16.61■□□□□ 0.25
CTSA-211ENST00000606066 RANBP17Q9H2T7 1088 aaKnown RBP16.61■□□□□ 0.25
CTSA-211ENST00000606066 RAVER2Q9HCJ3 691 aaKnown RBP16.61■□□□□ 0.25
CTSA-211ENST00000606066 SZT2Q5T011 3432 aa16.6■□□□□ 0.25
CTSA-211ENST00000606066 H0YGN5 161 aa16.6■□□□□ 0.25
CTSA-211ENST00000606066 ZBTB43O43298 467 aa16.6■□□□□ 0.25
CTSA-211ENST00000606066 STAG2Q8N3U4 1231 aa16.6■□□□□ 0.25
CTSA-211ENST00000606066 BRF1Q92994 677 aa16.6■□□□□ 0.25
CTSA-211ENST00000606066 NUDT12Q9BQG2 462 aa16.6■□□□□ 0.25
CTSA-211ENST00000606066 C22orf23Q9BZE7 217 aa16.6■□□□□ 0.25
CTSA-211ENST00000606066 UPF3BQ9BZI7 483 aaKnown RBP16.6■□□□□ 0.25
CTSA-211ENST00000606066 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
CTSA-211ENST00000606066 KLF18A0A0U1RQI7 1052 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 ICAM1P05362 532 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 PTPREP23469 700 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 SLC4A3P48751 1232 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 RCAN1P53805 252 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 TKFCQ3LXA3 575 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 CCDC174Q6PII3 467 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 APOA5Q6Q788 366 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 ADGRF4Q8IZF3 695 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 FANCBQ8NB91 859 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 CHST13Q8NET6 341 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 RAET1EQ8TD07 263 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 MYL10Q9BUA6 226 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 AGXT2Q9BYV1 514 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 RBM28Q9NW13 759 aaKnown RBP16.59■□□□□ 0.25
CTSA-211ENST00000606066 FBXO40Q9UH90 709 aa16.59■□□□□ 0.25
CTSA-211ENST00000606066 SLC15A5A6NIM6 579 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 GJB1P08034 283 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 FCER1AP12319 257 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 SMARCA1P28370 1054 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 FLT3LGP49771 235 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 SNAP25P60880 206 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 PRKCZQ05513 592 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 IRF5Q13568 498 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 PPP2R5BQ15173 497 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 UBE2Q1Q7Z7E8 422 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 MICU3Q86XE3 530 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 ABRAQ8N0Z2 381 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 BRPF3Q9ULD4 1205 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 CCPG1Q9ULG6 757 aa16.58■□□□□ 0.24
CTSA-211ENST00000606066 NAP1L2Q9ULW6 460 aaPredicted RBP16.58■□□□□ 0.24
CTSA-211ENST00000606066 ZNF536O15090 1300 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 CCDC196A0A1B0GTZ2 297 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 MYCP01106 439 aaPredicted RBP16.57■□□□□ 0.24
CTSA-211ENST00000606066 CAPN2P17655 700 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 GRK4P32298 578 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 RGS2P41220 211 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 GJA8P48165 433 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 RBM25P49756 843 aaKnown RBP16.57■□□□□ 0.24
CTSA-211ENST00000606066 APOBRQ0VD83 1088 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 TRAF1Q13077 416 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 KCTD2Q14681 263 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 ANKRD1Q15327 319 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 MTFR1Q15390 333 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 CDC37Q16543 378 aaPredicted RBP16.57■□□□□ 0.24
CTSA-211ENST00000606066 AGBL1Q96MI9 1066 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 MMP19Q99542 508 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 ALDH8A1Q9H2A2 487 aaPredicted RBP16.57■□□□□ 0.24
CTSA-211ENST00000606066 CPVLQ9H3G5 476 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 RIOX1Q9H6W3 641 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 JMJD4Q9H9V9 463 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 SLC5A4Q9NY91 659 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 GJD2Q9UKL4 321 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 GABRQQ9UN88 632 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 RIPK3Q9Y572 518 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 RLFQ13129 1914 aa16.57■□□□□ 0.24
CTSA-211ENST00000606066 A0A0G2JMZ2 1700 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 GOLGA8AA7E2F4 631 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 GOLGA8BA8MQT2 603 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 ALAS1P13196 640 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 RXRAP19793 462 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 METAP2P50579 478 aaKnown RBP eCLIP16.56■□□□□ 0.24
CTSA-211ENST00000606066 EVCP57679 992 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 MAP2K5Q13163 448 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 GRB14Q14449 540 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 RTN1Q16799 776 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 MORN1Q5T089 497 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 CCDC144CPQ8IYA2 1237 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 SHISA4Q96DD7 197 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 TRERF1Q96PN7 1200 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 SPZ1Q9BXG8 430 aa16.56■□□□□ 0.24
CTSA-211ENST00000606066 BACH2Q9BYV9 841 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms