RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 STARD3NLO95772 234 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 KLK7P49862 253 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 ZBED6P86452 979 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 KCNB1Q14721 858 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 EZH2Q15910 746 aaKnown RBP17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 ARL6IP4Q66PJ3 421 aaKnown RBP17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 TTI2Q6NXR4 508 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 SND1Q7KZF4 910 aaKnown RBP eCLIP17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 ZNF572Q7Z3I7 529 aaPredicted RBP17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 FNBP4Q8N3X1 1017 aaPredicted RBP17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 SRBD1Q8N5C6 995 aaKnown RBP17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 HDAC7Q8WUI4 952 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 TRIM47Q96LD4 638 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 HINFPQ9BQA5 517 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 NUP58Q9BVL2 599 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 ZNHIT6Q9NWK9 470 aaKnown RBP17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 TMOD3Q9NYL9 352 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 LRP2BPQ9P2M1 347 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 MAGEC2Q9UBF1 373 aaPredicted RBP17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 SNX12Q9UMY4 172 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 PLCH1Q4KWH8 1693 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 MACROD2A1Z1Q3 448 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 EIF3HO15372 352 aaKnown RBP eCLIP17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 KLRC4O43908 158 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 CALM1P0DP23 149 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 CALM2P0DP24 149 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 CALM3P0DP25 149 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 CYP7A1P22680 504 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 CYP27A1Q02318 531 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 NAALADL2Q58DX5 795 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 GBP6Q6ZN66 633 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 RETREG2Q8NC44 543 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 KAT2BQ92831 832 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 RRP36Q96EU6 259 aaKnown RBP17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 EXOC1Q9NV70 894 aa17.06■□□□□ 0.32
LYSMD4-211ENST00000604213 GOLGA8KD6RF30 607 aa17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 DDAH1O94760 285 aa17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 ERLIN2O94905 339 aa17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 IPO7O95373 1038 aaKnown RBP17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 VAV2P52735 878 aa17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 NLRP5P59047 1200 aa17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 CCDC70Q6NSX1 233 aa17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 RUBCNQ92622 972 aa17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 SECISBP2LQ93073 1101 aaKnown RBP17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 DUSP9Q99956 384 aaKnown RBP17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 TUBGCP2Q9BSJ2 902 aa17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 LRRC1Q9BTT6 524 aa17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 DEF6Q9H4E7 631 aa17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 DISC1Q9NRI5 854 aa17.05■□□□□ 0.32
LYSMD4-211ENST00000604213 ZNF263O14978 683 aa17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 IL2RBP14784 551 aa17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 ATF3P18847 181 aa17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 TRIM21P19474 475 aaKnown RBP17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 LIG3P49916 1009 aa17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 ITIH3Q06033 890 aa17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 KIF5AQ12840 1032 aa17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 NOC3LQ8WTT2 800 aaKnown RBP17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 GEMIN8Q9NWZ8 242 aaKnown RBP17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 DMGDHQ9UI17 866 aaKnown RBP17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 CYP2D7A0A087X1C5 515 aa17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 PSMA7O14818 248 aa17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 VEGFAP15692 232 aaPredicted RBP17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 GNGT1P63211 74 aa17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 CDK17Q00537 523 aa17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 GIMAP8Q8ND71 665 aaPredicted RBP17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 BCAS4Q8TDM0 211 aa17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 TSGA10Q9BZW7 698 aa17.04■□□□□ 0.32
LYSMD4-211ENST00000604213 SCG2P13521 617 aa17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 TBC1D8BQ0IIM8 1120 aa17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 LRWD1Q9UFC0 647 aa17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 DUOX1Q9NRD9 1551 aa17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 MAGEB6P1A0A0J9YX57 407 aa17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 NUTM2BA6NNL0 878 aaPredicted RBP17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 NUTM2EB1AL46 878 aaPredicted RBP17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 RHOBTB3O94955 611 aa17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 EPB41P11171 864 aaKnown RBP17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 MCTP2Q6DN12 878 aa17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 IQCA1Q86XH1 822 aa17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 ANKRD18AQ8IVF6 992 aa17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 SMCR8Q8TEV9 937 aaPredicted RBP17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 SHANK3Q9BYB0 1731 aa17.03■□□□□ 0.32
LYSMD4-211ENST00000604213 OPA1O60313 960 aa17.02■□□□□ 0.32
LYSMD4-211ENST00000604213 PRLRP16471 622 aa17.02■□□□□ 0.32
LYSMD4-211ENST00000604213 SWT1Q5T5J6 900 aaKnown RBP17.02■□□□□ 0.32
LYSMD4-211ENST00000604213 CSGALNACT2Q8N6G5 542 aa17.02■□□□□ 0.32
LYSMD4-211ENST00000604213 TSEN2Q8NCE0 465 aaKnown RBP17.02■□□□□ 0.32
LYSMD4-211ENST00000604213 SPATA4Q8NEY3 305 aa17.02■□□□□ 0.32
LYSMD4-211ENST00000604213 TRIM58Q8NG06 486 aa17.02■□□□□ 0.32
LYSMD4-211ENST00000604213 PIGBQ92521 554 aa17.02■□□□□ 0.32
LYSMD4-211ENST00000604213 RABEP2Q9H5N1 569 aa17.02■□□□□ 0.32
LYSMD4-211ENST00000604213 TOGARAM1Q9Y4F4 1720 aa17.02■□□□□ 0.32
LYSMD4-211ENST00000604213 SHTN1A0MZ66 631 aa17.02■□□□□ 0.31
LYSMD4-211ENST00000604213 FGRP09769 529 aa17.02■□□□□ 0.31
LYSMD4-211ENST00000604213 SKOR1P84550 965 aa17.02■□□□□ 0.31
LYSMD4-211ENST00000604213 PFKFB3Q16875 520 aaPredicted RBP17.02■□□□□ 0.31
LYSMD4-211ENST00000604213 KRT26Q7Z3Y9 468 aa17.02■□□□□ 0.31
LYSMD4-211ENST00000604213 DHTKD1Q96HY7 919 aaPredicted RBP17.02■□□□□ 0.31
LYSMD4-211ENST00000604213 CAPN6Q9Y6Q1 641 aa17.02■□□□□ 0.31
LYSMD4-211ENST00000604213 COL22A1Q8NFW1 1626 aaPredicted RBP17.02■□□□□ 0.31
LYSMD4-211ENST00000604213 ANKRD36CQ5JPF3 1778 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms