RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 PRPF40AO75400 957 aaKnown RBP11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 XBP1P17861 261 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 OSBPP22059 807 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 HMGCS2P54868 508 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 ICA1Q05084 483 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 SEPT2Q15019 361 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 TPRNQ4KMQ1 711 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 GADL1Q6ZQY3 521 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 CLEC17AQ6ZS10 378 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 TMTC3Q6ZXV5 915 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 CLEC10AQ8IUN9 316 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 CD99L2Q8TCZ2 262 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 AIFM3Q96NN9 605 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 MAP3K14Q99558 947 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 FEZ1Q99689 392 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 RNF26Q9BY78 433 aaPredicted RBP11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 ZSCAN16Q9H4T2 348 aaPredicted RBP11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 NYAP2Q9P242 653 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 STK36Q9NRP7 1315 aa11.89□□□□□ -0.51
DDX55P1-201ENST00000603334 IGKV6D-41A0A0C4DH26 115 aa11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 hCG_1642624A0A1W2PR95 340 aa11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 GOLGA8HP0CJ92 632 aa11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 CTGFP29279 349 aa11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 GCLCP48506 637 aaPredicted RBP11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 DNM1Q05193 864 aaKnown RBP11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 SAFBQ15424 915 aaKnown RBP eCLIP11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 PKN2Q16513 984 aaKnown RBP11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 SHROOM1Q2M3G4 852 aaPredicted RBP11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 KRT40Q6A162 431 aa11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 NBPF11Q86T75 865 aa11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 STAG2Q8N3U4 1231 aa11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 SRBD1Q8N5C6 995 aaKnown RBP11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 LZTS2Q9BRK4 669 aa11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 VAT1LQ9HCJ6 419 aa11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 CNPY2Q9Y2B0 182 aa11.88□□□□□ -0.51
DDX55P1-201ENST00000603334 KLRF2D3W0D1 207 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 GNRH1P01148 92 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 EEF2P13639 858 aaKnown RBP11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 SP3Q02447 781 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 RESTQ13127 1097 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 CSPP1Q1MSJ5 1256 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 CCDC96Q2M329 555 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 FAM173BQ6P4H8 233 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 FBXO46Q6PJ61 603 aaPredicted RBP11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 C17orf99Q6UX52 265 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 SIAH1Q8IUQ4 282 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 FBXO18Q8NFZ0 1043 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 MKL1Q969V6 931 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 ARHGAP39Q9C0H5 1083 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 GPCPD1Q9NPB8 672 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 EMILIN3Q9NT22 766 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 GJB4Q9NTQ9 266 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 MAD2L2Q9UI95 211 aa11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 FRMPD2Q68DX3 1309 aaPredicted RBP11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 GREB1LQ9C091 1923 aaPredicted RBP11.87□□□□□ -0.51
DDX55P1-201ENST00000603334 USP17L15C9J2P7 530 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 USP17L13C9JLJ4 530 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 USP17L11C9JVI0 530 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 USP17L18D6R9N7 530 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 USP17L22D6RA61 530 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 USP17L17D6RBQ6 530 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 USP17L19D6RCP7 530 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 USP17L20D6RJB6 530 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 FIBPO43427 364 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 TRAK2O60296 914 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 NOVP48745 357 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 KRT85P78386 507 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 USP17L24Q0WX57 530 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 SKOR2Q2VWA4 1001 aaPredicted RBP11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 ACER1Q8TDN7 264 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 SMCR8Q8TEV9 937 aaPredicted RBP11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 ZNF396Q96N95 335 aaPredicted RBP11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 GOPCQ9HD26 462 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 RBM27Q9P2N5 1060 aaKnown RBP11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 TFIP11Q9UBB9 837 aaKnown RBP11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 TRIM17Q9Y577 477 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 MYPNQ86TC9 1320 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 CNTNAP5Q8WYK1 1306 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 A0A1W2PRG0 241 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 PALM3A6NDB9 673 aaPredicted RBP11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 VCAM1P19320 739 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 SOX10P56693 466 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 IRX3P78415 501 aaPredicted RBP11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 KIF22Q14807 665 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 TREML2Q5T2D2 321 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 SLFN13Q68D06 897 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 LBX2Q6XYB7 198 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 CATSPERGQ6ZRH7 1159 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 GMCL1P1Q8NEA9 526 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 UBA5Q9GZZ9 404 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 ASCC2Q9H1I8 757 aaPredicted RBP11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 VCPKMTQ9H867 229 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 HOXC10Q9NYD6 342 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 KCNJ14Q9UNX9 436 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 PTPN22Q9Y2R2 807 aa11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 DDX49Q9Y6V7 483 aaKnown RBP11.86□□□□□ -0.51
DDX55P1-201ENST00000603334 DOCK3Q8IZD9 2030 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms