RNA–Protein interactions for RNA: ENST00000602165.1

GTPBP3-228, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-228ENST00000602165 LCTP09848 1927 aa21.54■■□□□ 1.04
GTPBP3-228ENST00000602165 KDM4AO75164 1064 aa21.53■■□□□ 1.04
GTPBP3-228ENST00000602165 MYCNP04198 464 aaPredicted RBP21.53■■□□□ 1.04
GTPBP3-228ENST00000602165 SLC16A2P36021 539 aa21.53■■□□□ 1.04
GTPBP3-228ENST00000602165 SENP6Q9GZR1 1112 aaPredicted RBP21.53■■□□□ 1.04
GTPBP3-228ENST00000602165 ACAD9Q9H845 621 aa21.53■■□□□ 1.04
GTPBP3-228ENST00000602165 RNF146Q9NTX7 359 aa21.53■■□□□ 1.04
GTPBP3-228ENST00000602165 B4E1Z4 1266 aa21.52■■□□□ 1.04
GTPBP3-228ENST00000602165 DNM1LO00429 736 aa21.52■■□□□ 1.04
GTPBP3-228ENST00000602165 PDHBP11177 359 aa21.52■■□□□ 1.04
GTPBP3-228ENST00000602165 ALAS1P13196 640 aa21.52■■□□□ 1.04
GTPBP3-228ENST00000602165 CHMLP26374 656 aa21.52■■□□□ 1.04
GTPBP3-228ENST00000602165 LRRC26Q2I0M4 334 aa21.52■■□□□ 1.04
GTPBP3-228ENST00000602165 TTC14Q96N46 770 aa21.52■■□□□ 1.04
GTPBP3-228ENST00000602165 NRBP1Q9UHY1 535 aa21.52■■□□□ 1.04
GTPBP3-228ENST00000602165 CTNNA3Q9UI47 895 aa21.52■■□□□ 1.04
GTPBP3-228ENST00000602165 ZMYND8Q9ULU4 1186 aaPredicted RBP21.52■■□□□ 1.04
GTPBP3-228ENST00000602165 RAD50Q92878 1312 aa21.52■■□□□ 1.03
GTPBP3-228ENST00000602165 ZNF865P0CJ78 1059 aaPredicted RBP21.51■■□□□ 1.03
GTPBP3-228ENST00000602165 SYDE2Q5VT97 1194 aa21.51■■□□□ 1.03
GTPBP3-228ENST00000602165 ARRDC4Q8NCT1 418 aa21.51■■□□□ 1.03
GTPBP3-228ENST00000602165 FGD4Q96M96 766 aa21.51■■□□□ 1.03
GTPBP3-228ENST00000602165 TRERF1Q96PN7 1200 aa21.51■■□□□ 1.03
GTPBP3-228ENST00000602165 RBM27Q9P2N5 1060 aaKnown RBP21.51■■□□□ 1.03
GTPBP3-228ENST00000602165 CNPY2Q9Y2B0 182 aa21.51■■□□□ 1.03
GTPBP3-228ENST00000602165 RANBP2P49792 3224 aaKnown RBP21.51■■□□□ 1.03
GTPBP3-228ENST00000602165 SYNGAP1Q96PV0 1343 aa21.51■■□□□ 1.03
GTPBP3-228ENST00000602165 MYH6P13533 1939 aa21.51■■□□□ 1.03
GTPBP3-228ENST00000602165 SNAI1O95863 264 aaPredicted RBP21.5■■□□□ 1.03
GTPBP3-228ENST00000602165 SYN1P17600 705 aa21.5■■□□□ 1.03
GTPBP3-228ENST00000602165 CNTN2Q02246 1040 aa21.5■■□□□ 1.03
GTPBP3-228ENST00000602165 TKFCQ3LXA3 575 aa21.5■■□□□ 1.03
GTPBP3-228ENST00000602165 MAMDC4Q6UXC1 1216 aa21.5■■□□□ 1.03
GTPBP3-228ENST00000602165 BTNL9Q6UXG8 535 aa21.5■■□□□ 1.03
GTPBP3-228ENST00000602165 IQCA1Q86XH1 822 aa21.5■■□□□ 1.03
GTPBP3-228ENST00000602165 MSL3Q8N5Y2 521 aaKnown RBP21.5■■□□□ 1.03
GTPBP3-228ENST00000602165 RUFY2Q8WXA3 655 aa21.5■■□□□ 1.03
GTPBP3-228ENST00000602165 LENG1Q96BZ8 264 aaPredicted RBP21.5■■□□□ 1.03
GTPBP3-228ENST00000602165 RANBP17Q9H2T7 1088 aaKnown RBP21.5■■□□□ 1.03
GTPBP3-228ENST00000602165 A1CFQ9NQ94 594 aaKnown RBP21.5■■□□□ 1.03
GTPBP3-228ENST00000602165 CCPG1Q9ULG6 757 aa21.5■■□□□ 1.03
GTPBP3-228ENST00000602165 LRRC37A2A6NM11 1700 aa21.49■■□□□ 1.03
GTPBP3-228ENST00000602165 KBTBD13C9JR72 458 aa21.49■■□□□ 1.03
GTPBP3-228ENST00000602165 RARBP10826 455 aa21.49■■□□□ 1.03
GTPBP3-228ENST00000602165 ATN1P54259 1190 aaPredicted RBP21.49■■□□□ 1.03
GTPBP3-228ENST00000602165 ZNF543Q08ER8 600 aa21.49■■□□□ 1.03
GTPBP3-228ENST00000602165 MUM1L1Q5H9M0 696 aa21.49■■□□□ 1.03
GTPBP3-228ENST00000602165 ZNF467Q7Z7K2 595 aaPredicted RBP21.49■■□□□ 1.03
GTPBP3-228ENST00000602165 XPNPEP3Q9NQH7 507 aa21.49■■□□□ 1.03
GTPBP3-228ENST00000602165 PCDH10Q9P2E7 1040 aa21.49■■□□□ 1.03
GTPBP3-228ENST00000602165 ZHX1Q9UKY1 873 aaPredicted RBP21.49■■□□□ 1.03
GTPBP3-228ENST00000602165 POTEB2H3BUK9 544 aa21.48■■□□□ 1.03
GTPBP3-228ENST00000602165 ICAM1P05362 532 aa21.48■■□□□ 1.03
GTPBP3-228ENST00000602165 SNHG28P0DPA3 235 aa21.48■■□□□ 1.03
GTPBP3-228ENST00000602165 AKR1A1P14550 325 aa21.48■■□□□ 1.03
GTPBP3-228ENST00000602165 NT5C2P49902 561 aa21.48■■□□□ 1.03
GTPBP3-228ENST00000602165 PTH1RQ03431 593 aa21.48■■□□□ 1.03
GTPBP3-228ENST00000602165 LRRC41Q15345 812 aa21.48■■□□□ 1.03
GTPBP3-228ENST00000602165 DGKHQ86XP1 1220 aa21.48■■□□□ 1.03
GTPBP3-228ENST00000602165 ZSCAN10Q96SZ4 725 aaPredicted RBP21.48■■□□□ 1.03
GTPBP3-228ENST00000602165 KRT23Q9C075 422 aa21.48■■□□□ 1.03
GTPBP3-228ENST00000602165 PRO3102Q9H379 93 aa21.48■■□□□ 1.03
GTPBP3-228ENST00000602165 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.48■■□□□ 1.03
GTPBP3-228ENST00000602165 ZSWIM5Q9P217 1185 aa21.48■■□□□ 1.03
GTPBP3-228ENST00000602165 PGK1P00558 417 aa21.47■■□□□ 1.03
GTPBP3-228ENST00000602165 CCDC178Q5BJE1 867 aa21.47■■□□□ 1.03
GTPBP3-228ENST00000602165 ARMCX2Q7L311 632 aa21.47■■□□□ 1.03
GTPBP3-228ENST00000602165 FAM133AQ8N9E0 248 aa21.47■■□□□ 1.03
GTPBP3-228ENST00000602165 PNMA1Q8ND90 353 aa21.47■■□□□ 1.03
GTPBP3-228ENST00000602165 KAT14Q9H8E8 782 aa21.47■■□□□ 1.03
GTPBP3-228ENST00000602165 CNNM2Q9H8M5 875 aa21.47■■□□□ 1.03
GTPBP3-228ENST00000602165 TNKSO95271 1327 aa21.47■■□□□ 1.03
GTPBP3-228ENST00000602165 GOLGA8HP0CJ92 632 aa21.46■■□□□ 1.03
GTPBP3-228ENST00000602165 FXR1P51114 621 aaKnown RBP eCLIP21.46■■□□□ 1.03
GTPBP3-228ENST00000602165 CCDC144CPQ8IYA2 1237 aa21.46■■□□□ 1.03
GTPBP3-228ENST00000602165 ENAHQ8N8S7 591 aaPredicted RBP21.46■■□□□ 1.03
GTPBP3-228ENST00000602165 SOWAHBA6NEL2 793 aa21.45■■□□□ 1.02
GTPBP3-228ENST00000602165 SGSM2O43147 1006 aa21.45■■□□□ 1.02
GTPBP3-228ENST00000602165 ADCYAP1R1P41586 468 aa21.45■■□□□ 1.02
GTPBP3-228ENST00000602165 ACVR2BQ13705 512 aa21.45■■□□□ 1.02
GTPBP3-228ENST00000602165 NSMFQ6X4W1 530 aa21.45■■□□□ 1.02
GTPBP3-228ENST00000602165 FERMT2Q96AC1 680 aa21.45■■□□□ 1.02
GTPBP3-228ENST00000602165 CPVLQ9H3G5 476 aa21.45■■□□□ 1.02
GTPBP3-228ENST00000602165 CYP39A1Q9NYL5 469 aa21.45■■□□□ 1.02
GTPBP3-228ENST00000602165 FAM184BQ9ULE4 1060 aa21.45■■□□□ 1.02
GTPBP3-228ENST00000602165 GPATCH4Q5T3I0 446 aaKnown RBP21.44■■□□□ 1.02
GTPBP3-228ENST00000602165 SKAP1Q86WV1 359 aa21.44■■□□□ 1.02
GTPBP3-228ENST00000602165 ANKS1AQ92625 1134 aa21.44■■□□□ 1.02
GTPBP3-228ENST00000602165 UBAC1Q9BSL1 405 aa21.44■■□□□ 1.02
GTPBP3-228ENST00000602165 UBA5Q9GZZ9 404 aa21.44■■□□□ 1.02
GTPBP3-228ENST00000602165 ABHD16BQ9H3Z7 469 aa21.44■■□□□ 1.02
GTPBP3-228ENST00000602165 DDX49Q9Y6V7 483 aaKnown RBP21.44■■□□□ 1.02
GTPBP3-228ENST00000602165 ASTN1O14525 1302 aa21.44■■□□□ 1.02
GTPBP3-228ENST00000602165 NFIBO00712 420 aa21.43■■□□□ 1.02
GTPBP3-228ENST00000602165 ADCY6O43306 1168 aa21.43■■□□□ 1.02
GTPBP3-228ENST00000602165 CYP21A2P08686 494 aa21.43■■□□□ 1.02
GTPBP3-228ENST00000602165 RTP1P59025 263 aa21.43■■□□□ 1.02
GTPBP3-228ENST00000602165 SLC39A5Q6ZMH5 540 aa21.43■■□□□ 1.02
GTPBP3-228ENST00000602165 CYB5R4Q7L1T6 521 aa21.43■■□□□ 1.02
GTPBP3-228ENST00000602165 RNF180Q86T96 592 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms