RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.57	■□□□□ 0.56
CAPN12-211	ENST00000601685	IPO7	O95373	1038 aa	Known RBP	18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	CALM1	P0DP23	149 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	CALM2	P0DP24	149 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	CALM3	P0DP25	149 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	MMS22L	Q6ZRQ5	1243 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	TMTC3	Q6ZXV5	915 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	NUP58	Q9BVL2	599 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	JADE2	Q9NQC1	790 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	ZNHIT6	Q9NWK9	470 aa	Known RBP	18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	MAGEC2	Q9UBF1	373 aa	Predicted RBP	18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	CNTNAP5	Q8WYK1	1306 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	SMIM22	K7EJ46	135 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	EBAG9	O00559	213 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	LONP1	P36776	959 aa	Known RBP	18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	STAT6	P42226	847 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	KCNB1	Q14721	858 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	ARL6IP4	Q66PJ3	421 aa	Known RBP	18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	GBP6	Q6ZN66	633 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	RETREG2	Q8NC44	543 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	SDR42E1	Q8WUS8	393 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	RUBCN	Q92622	972 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	CAPS2	Q9BXY5	557 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	NUP98	P52948	1817 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	ANKRD36C	Q5JPF3	1778 aa		18.56	■□□□□ 0.56
CAPN12-211	ENST00000601685	RASSF10	A6NK89	507 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	DEF6	Q9H4E7	631 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	SLAIN2	Q9P270	581 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	DUSP10	Q9Y6W6	482 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	ITGB4	P16144	1822 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	XIRP1	Q702N8	1843 aa	Known RBP	18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685		B4DLN1	442 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	GOLGA8K	D6RF30	607 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	ZBED6	P86452	979 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	SND1	Q7KZF4	910 aa	Known RBP eCLIP	18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	ZNF572	Q7Z3I7	529 aa	Predicted RBP	18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	CREG2	Q8IUH2	290 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	NOC3L	Q8WTT2	800 aa	Known RBP	18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	TRIM47	Q96LD4	638 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	SH3GL2	Q99962	352 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	EXOC1	Q9NV70	894 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	LRP2BP	Q9P2M1	347 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	FAM169A	Q9Y6X4	670 aa		18.55	■□□□□ 0.56
CAPN12-211	ENST00000601685	GRIN2D	O15399	1336 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	EIF3H	O15372	352 aa	Known RBP eCLIP	18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	DDAH1	O94760	285 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	ERLIN2	O94905	339 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	VAV2	P52735	878 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	NLRP5	P59047	1200 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	ITIH3	Q06033	890 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	C4orf32	Q8N8J7	132 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	SECISBP2L	Q93073	1101 aa	Known RBP	18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	DRC1	Q96MC2	740 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	SNX12	Q9UMY4	172 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	MACROD2	A1Z1Q3	448 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	TRIM21	P19474	475 aa	Known RBP	18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	CYP7A1	P22680	504 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	KIF5A	Q12840	1032 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	TTI2	Q6NXR4	508 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	TSGA10	Q9BZW7	698 aa		18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.54	■□□□□ 0.56
CAPN12-211	ENST00000601685	DUOX1	Q9NRD9	1551 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	PSMA7	O14818	248 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	KLRC4	O43908	158 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	BCAM	P50895	628 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	CDK17	Q00537	523 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	ADGRA1	Q86SQ6	560 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	SRBD1	Q8N5C6	995 aa	Known RBP	18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	BCAS4	Q8TDM0	211 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	TUBGCP2	Q9BSJ2	902 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	DISC1	Q9NRI5	854 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	GEMIN8	Q9NWZ8	242 aa	Known RBP	18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	ABCA3	Q99758	1704 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	ERVV-1	B6SEH8	477 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	EZH2	Q15910	746 aa	Known RBP	18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	NAALADL2	Q58DX5	795 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	IQCA1	Q86XH1	822 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	ZNF34	Q8IZ26	560 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	RRP36	Q96EU6	259 aa	Known RBP	18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	LRRC1	Q9BTT6	524 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	EHD4	Q9H223	541 aa		18.53	■□□□□ 0.56
CAPN12-211	ENST00000601685	OPA1	O60313	960 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	SCG2	P13521	617 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	KLK7	P49862	253 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	GNGT1	P63211	74 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	CYP27A1	Q02318	531 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	HDAC7	Q8WUI4	952 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	DMGDH	Q9UI17	866 aa	Known RBP	18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	BCL9	O00512	1426 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	SHTN1	A0MZ66	631 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	NUTM2E	B1AL46	878 aa	Predicted RBP	18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	ADAMTS3	O15072	1205 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	RHOBTB3	O94955	611 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	PRLR	P16471	622 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	LIG3	P49916	1009 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	TBC1D8B	Q0IIM8	1120 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	SEMA3F	Q13275	785 aa		18.52	■□□□□ 0.56
CAPN12-211	ENST00000601685	GIMAP8	Q8ND71	665 aa	Predicted RBP	18.52	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms