RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 GOLGA8HP0CJ92 632 aa18.59■□□□□ 0.57
PPFIA4-213ENST00000601609 CAPN2P17655 700 aa18.59■□□□□ 0.57
PPFIA4-213ENST00000601609 SART3Q15020 963 aaKnown RBP18.59■□□□□ 0.57
PPFIA4-213ENST00000601609 CYB5R4Q7L1T6 521 aa18.59■□□□□ 0.57
PPFIA4-213ENST00000601609 CRISPLD2Q9H0B8 497 aa18.59■□□□□ 0.57
PPFIA4-213ENST00000601609 PLXNA1Q9UIW2 1896 aa18.58■□□□□ 0.57
PPFIA4-213ENST00000601609 IFIT3O14879 490 aaKnown RBP18.58■□□□□ 0.56
PPFIA4-213ENST00000601609 TKFCQ3LXA3 575 aa18.58■□□□□ 0.56
PPFIA4-213ENST00000601609 GPATCH4Q5T3I0 446 aaKnown RBP18.58■□□□□ 0.56
PPFIA4-213ENST00000601609 DPF3Q92784 378 aa18.58■□□□□ 0.56
PPFIA4-213ENST00000601609 TRERF1Q96PN7 1200 aa18.58■□□□□ 0.56
PPFIA4-213ENST00000601609 HTATIP2Q9BUP3 242 aa18.58■□□□□ 0.56
PPFIA4-213ENST00000601609 LSG1Q9H089 658 aaKnown RBP18.58■□□□□ 0.56
PPFIA4-213ENST00000601609 DDX20Q9UHI6 824 aaKnown RBP18.58■□□□□ 0.56
PPFIA4-213ENST00000601609 ZNF536O15090 1300 aa18.57■□□□□ 0.56
PPFIA4-213ENST00000601609 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
PPFIA4-213ENST00000601609 PARP1P09874 1014 aaKnown RBP18.57■□□□□ 0.56
PPFIA4-213ENST00000601609 CYBAP13498 195 aa18.57■□□□□ 0.56
PPFIA4-213ENST00000601609 TAL1P17542 331 aaPredicted RBP18.57■□□□□ 0.56
PPFIA4-213ENST00000601609 ZNF792Q3KQV3 632 aa18.57■□□□□ 0.56
PPFIA4-213ENST00000601609 BTNL9Q6UXG8 535 aa18.57■□□□□ 0.56
PPFIA4-213ENST00000601609 NECAB2Q7Z6G3 386 aa18.57■□□□□ 0.56
PPFIA4-213ENST00000601609 ANKLE1Q8NAG6 615 aa18.57■□□□□ 0.56
PPFIA4-213ENST00000601609 RANBP17Q9H2T7 1088 aaKnown RBP18.57■□□□□ 0.56
PPFIA4-213ENST00000601609 DIS3Q9Y2L1 958 aaKnown RBP18.57■□□□□ 0.56
PPFIA4-213ENST00000601609 PDE4DIPQ5VU43 2346 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 MSCO60682 206 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 ICAM1P05362 532 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 SNHG28P0DPA3 235 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 WTAPQ15007 396 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 ASPRV1Q53RT3 343 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 PRAMEF19Q5SWL8 479 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 NSMFQ6X4W1 530 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 STOX1Q6ZVD7 989 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 CHST3Q7LGC8 479 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 DIS3LQ8TF46 1054 aaKnown RBP18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 ANKS1AQ92625 1134 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 PAWRQ96IZ0 340 aaKnown RBP18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 TINF2Q9BSI4 451 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 UBA5Q9GZZ9 404 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 PPP4R2Q9NY27 417 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 CNPY2Q9Y2B0 182 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 TAF6LQ9Y6J9 622 aa18.56■□□□□ 0.56
PPFIA4-213ENST00000601609 POTEB2H3BUK9 544 aa18.55■□□□□ 0.56
PPFIA4-213ENST00000601609 PRPF38BQ5VTL8 546 aaKnown RBP18.55■□□□□ 0.56
PPFIA4-213ENST00000601609 ANO1Q5XXA6 986 aa18.55■□□□□ 0.56
PPFIA4-213ENST00000601609 TRPV1Q8NER1 839 aa18.55■□□□□ 0.56
PPFIA4-213ENST00000601609 CPVLQ9H3G5 476 aa18.55■□□□□ 0.56
PPFIA4-213ENST00000601609 A1CFQ9NQ94 594 aaKnown RBP18.55■□□□□ 0.56
PPFIA4-213ENST00000601609 OGDHLQ9ULD0 1010 aa18.55■□□□□ 0.56
PPFIA4-213ENST00000601609 PFASO15067 1338 aa18.54■□□□□ 0.56
PPFIA4-213ENST00000601609 SLC27A2O14975 620 aa18.54■□□□□ 0.56
PPFIA4-213ENST00000601609 MUM1L1Q5H9M0 696 aa18.54■□□□□ 0.56
PPFIA4-213ENST00000601609 TMEM67Q5HYA8 995 aa18.54■□□□□ 0.56
PPFIA4-213ENST00000601609 RNF20Q5VTR2 975 aa18.54■□□□□ 0.56
PPFIA4-213ENST00000601609 CREB3L3Q68CJ9 461 aa18.54■□□□□ 0.56
PPFIA4-213ENST00000601609 C11orf49Q9H6J7 331 aa18.54■□□□□ 0.56
PPFIA4-213ENST00000601609 ZHX1Q9UKY1 873 aaPredicted RBP18.54■□□□□ 0.56
PPFIA4-213ENST00000601609 PNMA2Q9UL42 364 aa18.54■□□□□ 0.56
PPFIA4-213ENST00000601609 FRMPD3Q5JV73 1810 aa18.53■□□□□ 0.56
PPFIA4-213ENST00000601609 SEPT4O43236 478 aa18.53■□□□□ 0.56
PPFIA4-213ENST00000601609 SEC23AQ15436 765 aa18.53■□□□□ 0.56
PPFIA4-213ENST00000601609 CDC37Q16543 378 aaPredicted RBP18.53■□□□□ 0.56
PPFIA4-213ENST00000601609 USH1GQ495M9 461 aa18.53■□□□□ 0.56
PPFIA4-213ENST00000601609 LHX8Q68G74 356 aa18.53■□□□□ 0.56
PPFIA4-213ENST00000601609 UBE2Q1Q7Z7E8 422 aa18.53■□□□□ 0.56
PPFIA4-213ENST00000601609 VAT1LQ9HCJ6 419 aa18.53■□□□□ 0.56
PPFIA4-213ENST00000601609 BRCA2P51587 3418 aa18.52■□□□□ 0.56
PPFIA4-213ENST00000601609 DNAJC25-GNG10A0A024R161 153 aa18.52■□□□□ 0.56
PPFIA4-213ENST00000601609 PTPDC1A2A3K4 754 aa18.52■□□□□ 0.56
PPFIA4-213ENST00000601609 ERICH6BQ5W0A0 696 aa18.52■□□□□ 0.56
PPFIA4-213ENST00000601609 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.52■□□□□ 0.56
PPFIA4-213ENST00000601609 MB21D2Q8IYB1 491 aaPredicted RBP18.52■□□□□ 0.56
PPFIA4-213ENST00000601609 MSL3Q8N5Y2 521 aaKnown RBP18.52■□□□□ 0.56
PPFIA4-213ENST00000601609 NRBP1Q9UHY1 535 aa18.52■□□□□ 0.56
PPFIA4-213ENST00000601609 SYNGAP1Q96PV0 1343 aa18.51■□□□□ 0.55
PPFIA4-213ENST00000601609 TNRC18O15417 2968 aaPredicted RBP18.51■□□□□ 0.55
PPFIA4-213ENST00000601609 PRC1O43663 620 aa18.51■□□□□ 0.55
PPFIA4-213ENST00000601609 MCM5P33992 734 aa18.51■□□□□ 0.55
PPFIA4-213ENST00000601609 CNTN2Q02246 1040 aa18.51■□□□□ 0.55
PPFIA4-213ENST00000601609 NFXL1Q6ZNB6 911 aa18.51■□□□□ 0.55
PPFIA4-213ENST00000601609 CATIPQ7Z7H3 387 aa18.51■□□□□ 0.55
PPFIA4-213ENST00000601609 ZNF467Q7Z7K2 595 aaPredicted RBP18.51■□□□□ 0.55
PPFIA4-213ENST00000601609 ADGRF4Q8IZF3 695 aa18.51■□□□□ 0.55
PPFIA4-213ENST00000601609 NUP133Q8WUM0 1156 aa18.51■□□□□ 0.55
PPFIA4-213ENST00000601609 WDR19Q8NEZ3 1342 aa18.5■□□□□ 0.55
PPFIA4-213ENST00000601609 KBTBD13C9JR72 458 aa18.5■□□□□ 0.55
PPFIA4-213ENST00000601609 NFIBO00712 420 aa18.5■□□□□ 0.55
PPFIA4-213ENST00000601609 EVI5O60447 810 aa18.5■□□□□ 0.55
PPFIA4-213ENST00000601609 IGHA2P01877 340 aa18.5■□□□□ 0.55
PPFIA4-213ENST00000601609 RARBP10826 455 aa18.5■□□□□ 0.55
PPFIA4-213ENST00000601609 AKR1A1P14550 325 aa18.5■□□□□ 0.55
PPFIA4-213ENST00000601609 ARMCX2Q7L311 632 aa18.5■□□□□ 0.55
PPFIA4-213ENST00000601609 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.5■□□□□ 0.55
PPFIA4-213ENST00000601609 CYP39A1Q9NYL5 469 aa18.5■□□□□ 0.55
PPFIA4-213ENST00000601609 KLRF2D3W0D1 207 aa18.49■□□□□ 0.55
PPFIA4-213ENST00000601609 CALML3P27482 149 aa18.49■□□□□ 0.55
PPFIA4-213ENST00000601609 ANTXR2P58335 489 aa18.49■□□□□ 0.55
PPFIA4-213ENST00000601609 BAATQ14032 418 aaPredicted RBP18.49■□□□□ 0.55
PPFIA4-213ENST00000601609 NECTIN1Q15223 517 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms