RNA–Protein interactions for RNA: ENST00000601054.1

SIPA1L3-210, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 4

Gene SIPA1L3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-210ENST00000601054 SYNRGQ9UMZ2 1314 aa20.42■□□□□ 0.86
SIPA1L3-210ENST00000601054 TRIM43BA6NCK2 446 aa20.41■□□□□ 0.86
SIPA1L3-210ENST00000601054 KIAA0355O15063 1070 aa20.41■□□□□ 0.86
SIPA1L3-210ENST00000601054 ORC4O43929 436 aa20.41■□□□□ 0.86
SIPA1L3-210ENST00000601054 FGRP09769 529 aa20.41■□□□□ 0.86
SIPA1L3-210ENST00000601054 NOVP48745 357 aa20.41■□□□□ 0.86
SIPA1L3-210ENST00000601054 CCSAPQ6IQ19 270 aaPredicted RBP20.41■□□□□ 0.86
SIPA1L3-210ENST00000601054 PCSK9Q8NBP7 692 aaKnown RBP20.41■□□□□ 0.86
SIPA1L3-210ENST00000601054 TRIM43Q96BQ3 446 aaPredicted RBP20.41■□□□□ 0.86
SIPA1L3-210ENST00000601054 IL17RBQ9NRM6 502 aa20.41■□□□□ 0.86
SIPA1L3-210ENST00000601054 ELP1O95163 1332 aa20.4■□□□□ 0.86
SIPA1L3-210ENST00000601054 MCCP23508 829 aa20.4■□□□□ 0.86
SIPA1L3-210ENST00000601054 IKQ13123 557 aaPredicted RBP20.4■□□□□ 0.86
SIPA1L3-210ENST00000601054 CCDC129Q6ZRS4 1044 aa20.4■□□□□ 0.86
SIPA1L3-210ENST00000601054 ARMCX2Q7L311 632 aa20.4■□□□□ 0.86
SIPA1L3-210ENST00000601054 SH3RF1Q7Z6J0 888 aa20.4■□□□□ 0.86
SIPA1L3-210ENST00000601054 FGD4Q96M96 766 aa20.4■□□□□ 0.86
SIPA1L3-210ENST00000601054 CRBNQ96SW2 442 aa20.4■□□□□ 0.86
SIPA1L3-210ENST00000601054 STARD7Q9NQZ5 370 aa20.4■□□□□ 0.86
SIPA1L3-210ENST00000601054 ISY1Q9ULR0 285 aaKnown RBP20.4■□□□□ 0.86
SIPA1L3-210ENST00000601054 COL6A3P12111 3177 aa20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 ZNF536O15090 1300 aa20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 DCDC2CA8MYV0 355 aa20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 RANBP6O60518 1105 aaKnown RBP20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 CTDSPL2Q05D32 466 aa20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 SHHQ15465 462 aa20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 KCNA10Q16322 511 aa20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 CCDC144BQ3MJ40 725 aa20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 FAM133AQ8N9E0 248 aa20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 LENG1Q96BZ8 264 aaPredicted RBP20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 UPF3AQ9H1J1 476 aaKnown RBP20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 HOMER2Q9NSB8 354 aa20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 RNF146Q9NTX7 359 aa20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 PLXNA1Q9UIW2 1896 aa20.39■□□□□ 0.85
SIPA1L3-210ENST00000601054 ZMYM6O95789 1325 aa20.38■□□□□ 0.85
SIPA1L3-210ENST00000601054 MROH7Q68CQ1 1323 aa20.38■□□□□ 0.85
SIPA1L3-210ENST00000601054 ASB14A6NK59 587 aa20.38■□□□□ 0.85
SIPA1L3-210ENST00000601054 PQBP1O60828 265 aaKnown RBP20.38■□□□□ 0.85
SIPA1L3-210ENST00000601054 RAG1P15918 1043 aa20.38■□□□□ 0.85
SIPA1L3-210ENST00000601054 GJA9P57773 515 aa20.38■□□□□ 0.85
SIPA1L3-210ENST00000601054 NKX3-2P78367 333 aa20.38■□□□□ 0.85
SIPA1L3-210ENST00000601054 MCMDC2Q4G0Z9 681 aa20.38■□□□□ 0.85
SIPA1L3-210ENST00000601054 VPS53Q5VIR6 699 aa20.38■□□□□ 0.85
SIPA1L3-210ENST00000601054 CCDC144CPQ8IYA2 1237 aa20.38■□□□□ 0.85
SIPA1L3-210ENST00000601054 GLT1D1Q96MS3 346 aa20.38■□□□□ 0.85
SIPA1L3-210ENST00000601054 A1CFQ9NQ94 594 aaKnown RBP20.38■□□□□ 0.85
SIPA1L3-210ENST00000601054 MYH4Q9Y623 1939 aa20.37■□□□□ 0.85
SIPA1L3-210ENST00000601054 LTBP2Q14767 1821 aa20.37■□□□□ 0.85
SIPA1L3-210ENST00000601054 C6orf222P0C671 652 aaPredicted RBP20.37■□□□□ 0.85
SIPA1L3-210ENST00000601054 PCP11498 1178 aaKnown RBP20.37■□□□□ 0.85
SIPA1L3-210ENST00000601054 SMAD3P84022 425 aaKnown RBP20.37■□□□□ 0.85
SIPA1L3-210ENST00000601054 C9orf50Q5SZB4 431 aa20.37■□□□□ 0.85
SIPA1L3-210ENST00000601054 DCAF4Q8WV16 495 aa20.37■□□□□ 0.85
SIPA1L3-210ENST00000601054 AGBL1Q96MI9 1066 aa20.37■□□□□ 0.85
SIPA1L3-210ENST00000601054 TRERF1Q96PN7 1200 aa20.37■□□□□ 0.85
SIPA1L3-210ENST00000601054 KATNBL1Q9H079 304 aa20.37■□□□□ 0.85
SIPA1L3-210ENST00000601054 TCP11L1Q9NUJ3 509 aa20.37■□□□□ 0.85
SIPA1L3-210ENST00000601054 TMEM39AQ9NV64 488 aa20.37■□□□□ 0.85
SIPA1L3-210ENST00000601054 PRR12Q9ULL5 1215 aa20.37■□□□□ 0.85
SIPA1L3-210ENST00000601054 SMCHD1A6NHR9 2005 aa20.36■□□□□ 0.85
SIPA1L3-210ENST00000601054 NMT2O60551 498 aa20.36■□□□□ 0.85
SIPA1L3-210ENST00000601054 FGAP02671 866 aa20.36■□□□□ 0.85
SIPA1L3-210ENST00000601054 CNTN2Q02246 1040 aa20.36■□□□□ 0.85
SIPA1L3-210ENST00000601054 FAAP100Q0VG06 881 aa20.36■□□□□ 0.85
SIPA1L3-210ENST00000601054 ZNF697Q5TEC3 545 aa20.36■□□□□ 0.85
SIPA1L3-210ENST00000601054 KCTD1Q719H9 257 aa20.36■□□□□ 0.85
SIPA1L3-210ENST00000601054 INCENPQ9NQS7 918 aa20.36■□□□□ 0.85
SIPA1L3-210ENST00000601054 TOP1P11387 765 aaKnown RBP20.35■□□□□ 0.85
SIPA1L3-210ENST00000601054 ALAS1P13196 640 aa20.35■□□□□ 0.85
SIPA1L3-210ENST00000601054 ITGB8P26012 769 aa20.35■□□□□ 0.85
SIPA1L3-210ENST00000601054 GNASQ5JWF2 1037 aa20.35■□□□□ 0.85
SIPA1L3-210ENST00000601054 BTNL9Q6UXG8 535 aa20.35■□□□□ 0.85
SIPA1L3-210ENST00000601054 PNMA2Q9UL42 364 aa20.35■□□□□ 0.85
SIPA1L3-210ENST00000601054 A0A0D9SFI3 127 aa20.34■□□□□ 0.85
SIPA1L3-210ENST00000601054 SOWAHBA6NEL2 793 aa20.34■□□□□ 0.85
SIPA1L3-210ENST00000601054 ADCY6O43306 1168 aa20.34■□□□□ 0.85
SIPA1L3-210ENST00000601054 ICAM1P05362 532 aa20.34■□□□□ 0.85
SIPA1L3-210ENST00000601054 ASGR1P07306 291 aa20.34■□□□□ 0.85
SIPA1L3-210ENST00000601054 HSPD1P10809 573 aaKnown RBP20.34■□□□□ 0.85
SIPA1L3-210ENST00000601054 NT5C2P49902 561 aa20.34■□□□□ 0.85
SIPA1L3-210ENST00000601054 CDK7P50613 346 aa20.34■□□□□ 0.85
SIPA1L3-210ENST00000601054 MFAP1P55081 439 aaKnown RBP20.34■□□□□ 0.85
SIPA1L3-210ENST00000601054 FPGSQ05932 587 aa20.34■□□□□ 0.85
SIPA1L3-210ENST00000601054 FAM227BQ96M60 508 aa20.34■□□□□ 0.85
SIPA1L3-210ENST00000601054 TTC14Q96N46 770 aa20.34■□□□□ 0.85
SIPA1L3-210ENST00000601054 A0A0C4DFX4 3053 aa20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 LAMA2P24043 3122 aaKnown RBP20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 LOC102724159A0A0B4J2E5 919 aa20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 A0A0U1RQG5 324 aaPredicted RBP20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 MYADML2A6NDP7 307 aa20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 TNFAIP2Q03169 654 aa20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 PWP2Q15269 919 aaKnown RBP20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 CCDC96Q2M329 555 aa20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 CCDC174Q6PII3 467 aa20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 SMC5Q8IY18 1101 aa20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 GUCD1Q96NT3 240 aa20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 SEZ6LQ9BYH1 1024 aa20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 RANBP17Q9H2T7 1088 aaKnown RBP20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 RWDD1Q9H446 243 aaPredicted RBP20.33■□□□□ 0.85
SIPA1L3-210ENST00000601054 TOMM22Q9NS69 142 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms