RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 BMP8BP34820 402 aa13.66□□□□□ -0.22
SOX2-OT-233ENST00000600778 MAGEA10P43363 369 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-233ENST00000600778 LRRC41Q15345 812 aa13.66□□□□□ -0.22
SOX2-OT-233ENST00000600778 CCDC96Q2M329 555 aa13.66□□□□□ -0.22
SOX2-OT-233ENST00000600778 AKNAD1Q5T1N1 836 aa13.66□□□□□ -0.22
SOX2-OT-233ENST00000600778 CCDC174Q6PII3 467 aa13.66□□□□□ -0.22
SOX2-OT-233ENST00000600778 MSL3Q8N5Y2 521 aaKnown RBP13.66□□□□□ -0.22
SOX2-OT-233ENST00000600778 DCAF4Q8WV16 495 aa13.66□□□□□ -0.22
SOX2-OT-233ENST00000600778 TMEM47Q9BQJ4 181 aa13.66□□□□□ -0.22
SOX2-OT-233ENST00000600778 XPNPEP3Q9NQH7 507 aa13.66□□□□□ -0.22
SOX2-OT-233ENST00000600778 TCP11L1Q9NUJ3 509 aa13.66□□□□□ -0.22
SOX2-OT-233ENST00000600778 PRR12Q9ULL5 1215 aa13.66□□□□□ -0.22
SOX2-OT-233ENST00000600778 ZNF536O15090 1300 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 SYNGAP1Q96PV0 1343 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 A0A1W2PPC1 479 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 SNAI1O95863 264 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 PGK1P00558 417 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 TOP1P11387 765 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 ALAS1P13196 640 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 PDE4AP27815 886 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 ADCYAP1R1P41586 468 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 RTP1P59025 263 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 TTBK2Q6IQ55 1244 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 MAMDC4Q6UXC1 1216 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 SLC39A5Q6ZMH5 540 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 TBC1D10CQ8IV04 446 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 FERMT2Q96AC1 680 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 LENG1Q96BZ8 264 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 TRERF1Q96PN7 1200 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 ACAD9Q9H845 621 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 RNF146Q9NTX7 359 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 ZHX1Q9UKY1 873 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 ATP11BQ9Y2G3 1177 aa13.65□□□□□ -0.22
SOX2-OT-233ENST00000600778 POTEB2H3BUK9 544 aa13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 NEFLP07196 543 aa13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 PCP11498 1178 aaKnown RBP13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 SLC16A2P36021 539 aa13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 MDM2Q00987 491 aaPredicted RBP13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 CNTN2Q02246 1040 aa13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 ACVR2BQ13705 512 aa13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 TKFCQ3LXA3 575 aa13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 RNF180Q86T96 592 aa13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 ZKSCAN3Q9BRR0 538 aa13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 RNF41Q9H4P4 317 aaPredicted RBP13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 GPCPD1Q9NPB8 672 aa13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 FAM184BQ9ULE4 1060 aa13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 SMCHD1A6NHR9 2005 aa13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 FRMPD2Q68DX3 1309 aaPredicted RBP13.64□□□□□ -0.23
SOX2-OT-233ENST00000600778 MUM1L1Q5H9M0 696 aa13.63□□□□□ -0.23
SOX2-OT-233ENST00000600778 ESR2Q92731 530 aa13.63□□□□□ -0.23
SOX2-OT-233ENST00000600778 FGD4Q96M96 766 aa13.63□□□□□ -0.23
SOX2-OT-233ENST00000600778 TTC14Q96N46 770 aa13.63□□□□□ -0.23
SOX2-OT-233ENST00000600778 UBE2OQ9C0C9 1292 aaKnown RBP13.63□□□□□ -0.23
SOX2-OT-233ENST00000600778 A1CFQ9NQ94 594 aaKnown RBP13.63□□□□□ -0.23
SOX2-OT-233ENST00000600778 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-233ENST00000600778 CCPG1Q9ULG6 757 aa13.63□□□□□ -0.23
SOX2-OT-233ENST00000600778 NEDD4P46934 1319 aa13.63□□□□□ -0.23
SOX2-OT-233ENST00000600778 SOX1O00570 391 aaPredicted RBP13.62□□□□□ -0.23
SOX2-OT-233ENST00000600778 GSPT1P15170 499 aaKnown RBP13.62□□□□□ -0.23
SOX2-OT-233ENST00000600778 SYDE2Q5VT97 1194 aa13.62□□□□□ -0.23
SOX2-OT-233ENST00000600778 BTNL9Q6UXG8 535 aa13.62□□□□□ -0.23
SOX2-OT-233ENST00000600778 ARMCX2Q7L311 632 aa13.62□□□□□ -0.23
SOX2-OT-233ENST00000600778 CCDC144CPQ8IYA2 1237 aa13.62□□□□□ -0.23
SOX2-OT-233ENST00000600778 FAM133AQ8N9E0 248 aa13.62□□□□□ -0.23
SOX2-OT-233ENST00000600778 DSCC1Q9BVC3 393 aa13.62□□□□□ -0.23
SOX2-OT-233ENST00000600778 RANBP17Q9H2T7 1088 aaKnown RBP13.62□□□□□ -0.23
SOX2-OT-233ENST00000600778 ABHD16BQ9H3Z7 469 aa13.62□□□□□ -0.23
SOX2-OT-233ENST00000600778 PRKAG2Q9UGJ0 569 aa13.62□□□□□ -0.23
SOX2-OT-233ENST00000600778 TRIOBPQ9H2D6 2365 aa13.62□□□□□ -0.23
SOX2-OT-233ENST00000600778 LAMA3Q16787 3333 aa13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 SOWAHBA6NEL2 793 aa13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 ADAMTS4O75173 837 aa13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 ICAM1P05362 532 aa13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 PDHBP11177 359 aa13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 IMMTQ16891 758 aaKnown RBP13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 CCDC144BQ3MJ40 725 aa13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 TRIM60Q495X7 471 aa13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 TTC22Q5TAA0 569 aa13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 TDHQ8IZJ6 230 aa13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 LRCH3Q96II8 777 aa13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 LBHD1Q9BQE6 289 aaPredicted RBP13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 PRDM5Q9NQX1 630 aaPredicted RBP13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 PHF24Q9UPV7 400 aa13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 SYNRGQ9UMZ2 1314 aa13.61□□□□□ -0.23
SOX2-OT-233ENST00000600778 A0A1W2PQ45 241 aaPredicted RBP13.6□□□□□ -0.23
SOX2-OT-233ENST00000600778 A0A1W2PQY0 241 aa13.6□□□□□ -0.23
SOX2-OT-233ENST00000600778 B4E1Z4 1266 aa13.6□□□□□ -0.23
SOX2-OT-233ENST00000600778 ADCY6O43306 1168 aa13.6□□□□□ -0.23
SOX2-OT-233ENST00000600778 KDM4AO75164 1064 aa13.6□□□□□ -0.23
SOX2-OT-233ENST00000600778 DUSP11O75319 330 aaKnown RBP13.6□□□□□ -0.23
SOX2-OT-233ENST00000600778 IRX5P78411 483 aaPredicted RBP13.6□□□□□ -0.23
SOX2-OT-233ENST00000600778 SNX17Q15036 470 aa13.6□□□□□ -0.23
SOX2-OT-233ENST00000600778 NSMFQ6X4W1 530 aa13.6□□□□□ -0.23
SOX2-OT-233ENST00000600778 CENPQQ7L2Z9 268 aaPredicted RBP13.6□□□□□ -0.23
SOX2-OT-233ENST00000600778 IQCA1Q86XH1 822 aa13.6□□□□□ -0.23
SOX2-OT-233ENST00000600778 IL25Q9H293 177 aa13.6□□□□□ -0.23
SOX2-OT-233ENST00000600778 CYP39A1Q9NYL5 469 aa13.6□□□□□ -0.23
SOX2-OT-233ENST00000600778 CTNNA3Q9UI47 895 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms