RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 SAMD1Q6SPF0 538 aaPredicted RBP18.98■□□□□ 0.63
LSM4-206ENST00000600289 STOX1Q6ZVD7 989 aa18.98■□□□□ 0.63
LSM4-206ENST00000600289 RASGRP2Q7LDG7 609 aa18.98■□□□□ 0.63
LSM4-206ENST00000600289 NCAPG2Q86XI2 1143 aa18.98■□□□□ 0.63
LSM4-206ENST00000600289 GUCD1Q96NT3 240 aa18.98■□□□□ 0.63
LSM4-206ENST00000600289 MTA3Q9BTC8 594 aa18.98■□□□□ 0.63
LSM4-206ENST00000600289 ANO2Q9NQ90 1003 aa18.98■□□□□ 0.63
LSM4-206ENST00000600289 TAF6LQ9Y6J9 622 aa18.98■□□□□ 0.63
LSM4-206ENST00000600289 FCER1AP12319 257 aa18.97■□□□□ 0.63
LSM4-206ENST00000600289 ZKSCAN1P17029 563 aaPredicted RBP18.97■□□□□ 0.63
LSM4-206ENST00000600289 ADORA2AP29274 412 aa18.97■□□□□ 0.63
LSM4-206ENST00000600289 CCDC96Q2M329 555 aa18.97■□□□□ 0.63
LSM4-206ENST00000600289 GPATCH4Q5T3I0 446 aaKnown RBP18.97■□□□□ 0.63
LSM4-206ENST00000600289 SNRNP48Q6IEG0 339 aaKnown RBP18.97■□□□□ 0.63
LSM4-206ENST00000600289 CYB5R4Q7L1T6 521 aa18.97■□□□□ 0.63
LSM4-206ENST00000600289 RALYLQ86SE5 291 aaKnown RBP18.97■□□□□ 0.63
LSM4-206ENST00000600289 TDHQ8IZJ6 230 aa18.97■□□□□ 0.63
LSM4-206ENST00000600289 PNMA1Q8ND90 353 aa18.97■□□□□ 0.63
LSM4-206ENST00000600289 KAT14Q9H8E8 782 aa18.97■□□□□ 0.63
LSM4-206ENST00000600289 PAK6Q9NQU5 681 aaPredicted RBP18.97■□□□□ 0.63
LSM4-206ENST00000600289 BIN2Q9UBW5 565 aaPredicted RBP18.97■□□□□ 0.63
LSM4-206ENST00000600289 PRR12Q9ULL5 1215 aa18.97■□□□□ 0.63
LSM4-206ENST00000600289 ZMYND8Q9ULU4 1186 aaPredicted RBP18.97■□□□□ 0.63
LSM4-206ENST00000600289 LCTP09848 1927 aa18.97■□□□□ 0.63
LSM4-206ENST00000600289 CDH23Q9H251 3354 aa18.97■□□□□ 0.63
LSM4-206ENST00000600289 ZNF536O15090 1300 aa18.97■□□□□ 0.63
LSM4-206ENST00000600289 TTC28Q96AY4 2481 aa18.96■□□□□ 0.63
LSM4-206ENST00000600289 SLC27A2O14975 620 aa18.96■□□□□ 0.63
LSM4-206ENST00000600289 CREB3L3Q68CJ9 461 aa18.96■□□□□ 0.63
LSM4-206ENST00000600289 MB21D2Q8IYB1 491 aaPredicted RBP18.96■□□□□ 0.63
LSM4-206ENST00000600289 RANBP17Q9H2T7 1088 aaKnown RBP18.96■□□□□ 0.63
LSM4-206ENST00000600289 CTDP1Q9Y5B0 961 aaPredicted RBP18.96■□□□□ 0.63
LSM4-206ENST00000600289 SMCHD1A6NHR9 2005 aa18.96■□□□□ 0.63
LSM4-206ENST00000600289 IKQ13123 557 aaPredicted RBP18.95■□□□□ 0.62
LSM4-206ENST00000600289 TKFCQ3LXA3 575 aa18.95■□□□□ 0.62
LSM4-206ENST00000600289 IFIT1BQ5T764 474 aaKnown RBP18.95■□□□□ 0.62
LSM4-206ENST00000600289 OLFML2BQ68BL8 750 aa18.95■□□□□ 0.62
LSM4-206ENST00000600289 C7orf61Q8IZ16 206 aa18.95■□□□□ 0.62
LSM4-206ENST00000600289 CHST13Q8NET6 341 aa18.95■□□□□ 0.62
LSM4-206ENST00000600289 DIS3LQ8TF46 1054 aaKnown RBP18.95■□□□□ 0.62
LSM4-206ENST00000600289 PAWRQ96IZ0 340 aaKnown RBP18.95■□□□□ 0.62
LSM4-206ENST00000600289 SLC5A4Q9NY91 659 aa18.95■□□□□ 0.62
LSM4-206ENST00000600289 FBXO40Q9UH90 709 aa18.95■□□□□ 0.62
LSM4-206ENST00000600289 ISY1Q9ULR0 285 aaKnown RBP18.95■□□□□ 0.62
LSM4-206ENST00000600289 DIS3Q9Y2L1 958 aaKnown RBP18.95■□□□□ 0.62
LSM4-206ENST00000600289 RIPK3Q9Y572 518 aa18.95■□□□□ 0.62
LSM4-206ENST00000600289 COL9A1P20849 921 aa18.94■□□□□ 0.62
LSM4-206ENST00000600289 MAGEA10P43363 369 aaPredicted RBP18.94■□□□□ 0.62
LSM4-206ENST00000600289 KCTD2Q14681 263 aa18.94■□□□□ 0.62
LSM4-206ENST00000600289 CCL14Q16627 93 aa18.94■□□□□ 0.62
LSM4-206ENST00000600289 ASPRV1Q53RT3 343 aa18.94■□□□□ 0.62
LSM4-206ENST00000600289 SYDE2Q5VT97 1194 aa18.94■□□□□ 0.62
LSM4-206ENST00000600289 RNF20Q5VTR2 975 aa18.94■□□□□ 0.62
LSM4-206ENST00000600289 DPP9Q86TI2 863 aa18.94■□□□□ 0.62
LSM4-206ENST00000600289 CPXCR1Q8N123 301 aa18.94■□□□□ 0.62
LSM4-206ENST00000600289 NPLOC4Q8TAT6 608 aa18.94■□□□□ 0.62
LSM4-206ENST00000600289 MMP19Q99542 508 aa18.94■□□□□ 0.62
LSM4-206ENST00000600289 CRISPLD2Q9H0B8 497 aa18.94■□□□□ 0.62
LSM4-206ENST00000600289 RAVER2Q9HCJ3 691 aaKnown RBP18.94■□□□□ 0.62
LSM4-206ENST00000600289 PNMA2Q9UL42 364 aa18.94■□□□□ 0.62
LSM4-206ENST00000600289 MTMR7Q9Y216 660 aa18.94■□□□□ 0.62
LSM4-206ENST00000600289 FRMPD2Q68DX3 1309 aaPredicted RBP18.94■□□□□ 0.62
LSM4-206ENST00000600289 EPB41L2O43491 1005 aaKnown RBP18.93■□□□□ 0.62
LSM4-206ENST00000600289 COBLO75128 1261 aa18.93■□□□□ 0.62
LSM4-206ENST00000600289 ANTXR2P58335 489 aa18.93■□□□□ 0.62
LSM4-206ENST00000600289 SART3Q15020 963 aaKnown RBP18.93■□□□□ 0.62
LSM4-206ENST00000600289 TSGA10IPQ3SY00 556 aa18.93■□□□□ 0.62
LSM4-206ENST00000600289 TTBK2Q6IQ55 1244 aa18.93■□□□□ 0.62
LSM4-206ENST00000600289 DEFB118Q96PH6 123 aa18.93■□□□□ 0.62
LSM4-206ENST00000600289 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.93■□□□□ 0.621e-7■■■□□ 17.2
LSM4-206ENST00000600289 HMX1Q9NP08 348 aaPredicted RBP18.93■□□□□ 0.62
LSM4-206ENST00000600289 FLRT1Q9NZU1 646 aa18.93■□□□□ 0.62
LSM4-206ENST00000600289 LRRC37A2A6NM11 1700 aa18.93■□□□□ 0.62
LSM4-206ENST00000600289 DNAJC25-GNG10A0A024R161 153 aa18.92■□□□□ 0.62
LSM4-206ENST00000600289 ERICH2A1L162 156 aa18.92■□□□□ 0.62
LSM4-206ENST00000600289 TFRCP02786 760 aaKnown RBP18.92■□□□□ 0.62
LSM4-206ENST00000600289 ICAM1P05362 532 aa18.92■□□□□ 0.62
LSM4-206ENST00000600289 PRKAR2AP13861 404 aaKnown RBP18.92■□□□□ 0.62
LSM4-206ENST00000600289 TRIM32Q13049 653 aa18.92■□□□□ 0.62
LSM4-206ENST00000600289 ZNF792Q3KQV3 632 aa18.92■□□□□ 0.62
LSM4-206ENST00000600289 CHMP4CQ96CF2 233 aa18.92■□□□□ 0.62
LSM4-206ENST00000600289 MAML3Q96JK9 1138 aa18.92■□□□□ 0.62
LSM4-206ENST00000600289 GPCPD1Q9NPB8 672 aa18.92■□□□□ 0.62
LSM4-206ENST00000600289 WDR19Q8NEZ3 1342 aa18.92■□□□□ 0.62
LSM4-206ENST00000600289 POTEB2H3BUK9 544 aa18.91■□□□□ 0.62
LSM4-206ENST00000600289 IFIT3O14879 490 aaKnown RBP18.91■□□□□ 0.62
LSM4-206ENST00000600289 SYN1P17600 705 aa18.91■□□□□ 0.62
LSM4-206ENST00000600289 MCM5P33992 734 aa18.91■□□□□ 0.62
LSM4-206ENST00000600289 SLC16A2P36021 539 aa18.91■□□□□ 0.62
LSM4-206ENST00000600289 CACNB2Q08289 660 aaPredicted RBP18.91■□□□□ 0.62
LSM4-206ENST00000600289 WTAPQ15007 396 aa18.91■□□□□ 0.62
LSM4-206ENST00000600289 MFSD14CQ5VZR4 134 aa18.91■□□□□ 0.62
LSM4-206ENST00000600289 IGDCC4Q8TDY8 1250 aa18.91■□□□□ 0.62
LSM4-206ENST00000600289 ACAD9Q9H845 621 aa18.91■□□□□ 0.62
LSM4-206ENST00000600289 MCM3APO60318 1980 aa18.9■□□□□ 0.62
LSM4-206ENST00000600289 PARP1P09874 1014 aaKnown RBP18.9■□□□□ 0.62
LSM4-206ENST00000600289 NECAB2Q7Z6G3 386 aa18.9■□□□□ 0.62
LSM4-206ENST00000600289 ZNF467Q7Z7K2 595 aaPredicted RBP18.9■□□□□ 0.62
LSM4-206ENST00000600289 MSL3Q8N5Y2 521 aaKnown RBP18.9■□□□□ 0.62
LSM4-206ENST00000600289 KCNB2Q92953 911 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms