RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 TRPV1Q8NER1 839 aa9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 MAP4K1Q92918 833 aa9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 CHMP4CQ96CF2 233 aa9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 ZSCAN10Q96SZ4 725 aaPredicted RBP9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 ESYT1Q9BSJ8 1104 aa9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 ZSWIM5Q9P217 1185 aa9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 DDX20Q9UHI6 824 aaKnown RBP9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 MTMR7Q9Y216 660 aa9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 WDR19Q8NEZ3 1342 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 ICAM1P05362 532 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 SLC16A2P36021 539 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 SEC23AQ15436 765 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 GPATCH4Q5T3I0 446 aaKnown RBP9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 STOX1Q6ZVD7 989 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 CYB5R4Q7L1T6 521 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 ZNF467Q7Z7K2 595 aaPredicted RBP9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 MSL3Q8N5Y2 521 aaKnown RBP9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 DIS3LQ8TF46 1054 aaKnown RBP9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 FGD4Q96M96 766 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 AGBL1Q96MI9 1066 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 TINF2Q9BSI4 451 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 UBAC1Q9BSL1 405 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 HTATIP2Q9BUP3 242 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 LSG1Q9H089 658 aaKnown RBP9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 ACAD9Q9H845 621 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 KAT14Q9H8E8 782 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 RNF146Q9NTX7 359 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 NRBP1Q9UHY1 535 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 RBM8AQ9Y5S9 174 aaKnown RBP9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 TAF6LQ9Y6J9 622 aa9.36□□□□□ -0.91
CHMP2A-205ENST00000600006 E7EWF7 191 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 SEPT4O43236 478 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 SLC4A3P48751 1232 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 SNAP25P60880 206 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 TRDNQ13061 729 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 ASPRV1Q53RT3 343 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 CCDC174Q6PII3 467 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 MAMDC4Q6UXC1 1216 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 NECAB2Q7Z6G3 386 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 RALYLQ86SE5 291 aaKnown RBP9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 ANKRD35Q8N283 1001 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 FAM133AQ8N9E0 248 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 NCOA7Q8NI08 942 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 DDX11Q96FC9 970 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 PAWRQ96IZ0 340 aaKnown RBP9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 A1CFQ9NQ94 594 aaKnown RBP9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 HOMER2Q9NSB8 354 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 CCPG1Q9ULG6 757 aa9.35□□□□□ -0.91
CHMP2A-205ENST00000600006 PFASO15067 1338 aa9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 SYNGAP1Q96PV0 1343 aa9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 CDC45O75419 566 aa9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 COL6A1P12109 1028 aa9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 ALAS1P13196 640 aa9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 TAL1P17542 331 aaPredicted RBP9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 CNGA1P29973 690 aa9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 IFIT1BQ5T764 474 aaKnown RBP9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 KIAA1211Q6ZU35 1233 aa9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 MB21D2Q8IYB1 491 aaPredicted RBP9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 TRERF1Q96PN7 1200 aa9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 C11orf49Q9H6J7 331 aa9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 PNMA2Q9UL42 364 aa9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 GTF3C3Q9Y5Q9 886 aa9.34□□□□□ -0.91
CHMP2A-205ENST00000600006 POTEB2H3BUK9 544 aa9.33□□□□□ -0.92
CHMP2A-205ENST00000600006 DNM1LO00429 736 aa9.33□□□□□ -0.92
CHMP2A-205ENST00000600006 ZNF865P0CJ78 1059 aaPredicted RBP9.33□□□□□ -0.92
CHMP2A-205ENST00000600006 GOLGA8HP0CJ92 632 aa9.33□□□□□ -0.92
CHMP2A-205ENST00000600006 ANTXR2P58335 489 aa9.33□□□□□ -0.92
CHMP2A-205ENST00000600006 NECTIN1Q15223 517 aa9.33□□□□□ -0.92
CHMP2A-205ENST00000600006 MUM1L1Q5H9M0 696 aa9.33□□□□□ -0.92
CHMP2A-205ENST00000600006 PRAMEF19Q5SWL8 479 aa9.33□□□□□ -0.92
CHMP2A-205ENST00000600006 MTA3Q9BTC8 594 aa9.33□□□□□ -0.92
CHMP2A-205ENST00000600006 ANO2Q9NQ90 1003 aa9.33□□□□□ -0.92
CHMP2A-205ENST00000600006 CYP39A1Q9NYL5 469 aa9.33□□□□□ -0.92
CHMP2A-205ENST00000600006 CNPY2Q9Y2B0 182 aa9.33□□□□□ -0.92
CHMP2A-205ENST00000600006 ASTN1O14525 1302 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 MKI67P46013 3256 aaKnown RBP9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 ERICH2A1L162 156 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 SOWAHBA6NEL2 793 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 NFIBO00712 420 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 IFIT3O14879 490 aaKnown RBP9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 SLC27A2O14975 620 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 SNAI1O95863 264 aaPredicted RBP9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 PARP1P09874 1014 aaKnown RBP9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 AKR1A1P14550 325 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 CNTN2Q02246 1040 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 GRM4Q14833 912 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 WTAPQ15007 396 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 SART3Q15020 963 aaKnown RBP9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 CDC37Q16543 378 aaPredicted RBP9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 CREB3L3Q68CJ9 461 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 CASC1Q6TDU7 716 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 ARMCX2Q7L311 632 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 CLEC4DQ8WXI8 215 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 UBA5Q9GZZ9 404 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 KATNBL1Q9H079 304 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 CPVLQ9H3G5 476 aa9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.32□□□□□ -0.92
CHMP2A-205ENST00000600006 LOC102724159A0A0B4J2E5 919 aa9.31□□□□□ -0.92
CHMP2A-205ENST00000600006 PALM3A6NDB9 673 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms