RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 TMEM39AQ9NV64 488 aa20.68■□□□□ 0.9
HOMER3-210ENST00000599097 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.68■□□□□ 0.9
HOMER3-210ENST00000599097 RIPK3Q9Y572 518 aa20.68■□□□□ 0.9
HOMER3-210ENST00000599097 TMEM265A0A087WTH1 108 aa20.67■□□□□ 0.9
HOMER3-210ENST00000599097 DLL1O00548 723 aa20.67■□□□□ 0.9
HOMER3-210ENST00000599097 SNAI1O95863 264 aaPredicted RBP20.67■□□□□ 0.9
HOMER3-210ENST00000599097 FPGSQ05932 587 aa20.67■□□□□ 0.9
HOMER3-210ENST00000599097 AAMPQ13685 434 aa20.67■□□□□ 0.9
HOMER3-210ENST00000599097 PNMA2Q9UL42 364 aa20.67■□□□□ 0.9
HOMER3-210ENST00000599097 PCDHB15Q9Y5E8 787 aa20.67■□□□□ 0.9
HOMER3-210ENST00000599097 SMCHD1A6NHR9 2005 aa20.66■□□□□ 0.9
HOMER3-210ENST00000599097 TRIM43BA6NCK2 446 aa20.66■□□□□ 0.9
HOMER3-210ENST00000599097 C6orf222P0C671 652 aaPredicted RBP20.66■□□□□ 0.9
HOMER3-210ENST00000599097 SHHQ15465 462 aa20.66■□□□□ 0.9
HOMER3-210ENST00000599097 ARMCX2Q7L311 632 aa20.66■□□□□ 0.9
HOMER3-210ENST00000599097 TRIM43Q96BQ3 446 aaPredicted RBP20.66■□□□□ 0.9
HOMER3-210ENST00000599097 SEZ6LQ9BYH1 1024 aa20.66■□□□□ 0.9
HOMER3-210ENST00000599097 HELLSQ9NRZ9 838 aa20.66■□□□□ 0.9
HOMER3-210ENST00000599097 HOMER2Q9NSB8 354 aa20.66■□□□□ 0.9
HOMER3-210ENST00000599097 TLR3O15455 904 aaKnown RBP20.65■□□□□ 0.9
HOMER3-210ENST00000599097 RRP1P56182 461 aaKnown RBP20.65■□□□□ 0.9
HOMER3-210ENST00000599097 KCNA10Q16322 511 aa20.65■□□□□ 0.9
HOMER3-210ENST00000599097 RCSD1Q6JBY9 416 aa20.65■□□□□ 0.9
HOMER3-210ENST00000599097 KLHDC9Q8NEP7 349 aa20.65■□□□□ 0.9
HOMER3-210ENST00000599097 RNPC3Q96LT9 517 aaKnown RBP20.65■□□□□ 0.9
HOMER3-210ENST00000599097 SEC62Q99442 399 aaKnown RBP20.65■□□□□ 0.9
HOMER3-210ENST00000599097 RNF146Q9NTX7 359 aa20.65■□□□□ 0.9
HOMER3-210ENST00000599097 ANAPC4Q9UJX5 808 aa20.65■□□□□ 0.9
HOMER3-210ENST00000599097 A0A0U1RQG5 324 aaPredicted RBP20.64■□□□□ 0.89
HOMER3-210ENST00000599097 MFAP1P55081 439 aaKnown RBP20.64■□□□□ 0.89
HOMER3-210ENST00000599097 GJA9P57773 515 aa20.64■□□□□ 0.89
HOMER3-210ENST00000599097 CCDC144BQ3MJ40 725 aa20.64■□□□□ 0.89
HOMER3-210ENST00000599097 ANKRD45Q5TZF3 282 aa20.64■□□□□ 0.89
HOMER3-210ENST00000599097 CCDC129Q6ZRS4 1044 aa20.64■□□□□ 0.89
HOMER3-210ENST00000599097 DCAF4Q8WV16 495 aa20.64■□□□□ 0.89
HOMER3-210ENST00000599097 VTI1AQ96AJ9 217 aa20.64■□□□□ 0.89
HOMER3-210ENST00000599097 UPF3AQ9H1J1 476 aaKnown RBP20.64■□□□□ 0.89
HOMER3-210ENST00000599097 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.64■□□□□ 0.89
HOMER3-210ENST00000599097 ORC4O43929 436 aa20.63■□□□□ 0.89
HOMER3-210ENST00000599097 ZEB2O60315 1214 aa20.63■□□□□ 0.89
HOMER3-210ENST00000599097 RANBP6O60518 1105 aaKnown RBP20.63■□□□□ 0.89
HOMER3-210ENST00000599097 CABYRO75952 493 aa20.63■□□□□ 0.89
HOMER3-210ENST00000599097 PCP11498 1178 aaKnown RBP20.63■□□□□ 0.89
HOMER3-210ENST00000599097 MCCP23508 829 aa20.63■□□□□ 0.89
HOMER3-210ENST00000599097 NT5C2P49902 561 aa20.63■□□□□ 0.89
HOMER3-210ENST00000599097 ALX1Q15699 326 aa20.63■□□□□ 0.89
HOMER3-210ENST00000599097 GNASQ5JWF2 1037 aa20.63■□□□□ 0.89
HOMER3-210ENST00000599097 SH3RF1Q7Z6J0 888 aa20.63■□□□□ 0.89
HOMER3-210ENST00000599097 CCDC144CPQ8IYA2 1237 aa20.63■□□□□ 0.89
HOMER3-210ENST00000599097 LENG1Q96BZ8 264 aaPredicted RBP20.63■□□□□ 0.89
HOMER3-210ENST00000599097 COL6A3P12111 3177 aa20.63■□□□□ 0.89
HOMER3-210ENST00000599097 ZMYM6O95789 1325 aa20.62■□□□□ 0.89
HOMER3-210ENST00000599097 CCDC96Q2M329 555 aa20.62■□□□□ 0.89
HOMER3-210ENST00000599097 C9orf50Q5SZB4 431 aa20.62■□□□□ 0.89
HOMER3-210ENST00000599097 NOL8Q76FK4 1167 aaKnown RBP20.62■□□□□ 0.89
HOMER3-210ENST00000599097 FAM133AQ8N9E0 248 aa20.62■□□□□ 0.89
HOMER3-210ENST00000599097 TRERF1Q96PN7 1200 aa20.62■□□□□ 0.89
HOMER3-210ENST00000599097 MPHOSPH6Q99547 160 aaKnown RBP20.62■□□□□ 0.89
HOMER3-210ENST00000599097 A1CFQ9NQ94 594 aaKnown RBP20.62■□□□□ 0.89
HOMER3-210ENST00000599097 TOMM22Q9NS69 142 aa20.62■□□□□ 0.89
HOMER3-210ENST00000599097 CUL9Q8IWT3 2517 aa20.61■□□□□ 0.89
HOMER3-210ENST00000599097 SALL3Q9BXA9 1300 aa20.61■□□□□ 0.89
HOMER3-210ENST00000599097 LOC102724159A0A0B4J2E5 919 aa20.61■□□□□ 0.89
HOMER3-210ENST00000599097 ASGR1P07306 291 aa20.61■□□□□ 0.89
HOMER3-210ENST00000599097 ALAS1P13196 640 aa20.61■□□□□ 0.89
HOMER3-210ENST00000599097 TNFAIP2Q03169 654 aa20.61■□□□□ 0.89
HOMER3-210ENST00000599097 PPIGQ13427 754 aaKnown RBP eCLIP20.61■□□□□ 0.89
HOMER3-210ENST00000599097 HDAC1Q13547 482 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-210ENST00000599097 PWP2Q15269 919 aaKnown RBP20.61■□□□□ 0.89
HOMER3-210ENST00000599097 CCSAPQ6IQ19 270 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-210ENST00000599097 OTUD7AQ8TE49 926 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-210ENST00000599097 AP5M1Q9H0R1 490 aa20.61■□□□□ 0.89
HOMER3-210ENST00000599097 ADD3Q9UEY8 706 aaKnown RBP20.61■□□□□ 0.89
HOMER3-210ENST00000599097 TIMP1P01033 207 aa20.6■□□□□ 0.89
HOMER3-210ENST00000599097 NKX3-2P78367 333 aa20.6■□□□□ 0.89
HOMER3-210ENST00000599097 CTDSPL2Q05D32 466 aa20.6■□□□□ 0.89
HOMER3-210ENST00000599097 FAAP100Q0VG06 881 aa20.6■□□□□ 0.89
HOMER3-210ENST00000599097 MCMDC2Q4G0Z9 681 aa20.6■□□□□ 0.89
HOMER3-210ENST00000599097 TMEM199Q8N511 208 aa20.6■□□□□ 0.89
HOMER3-210ENST00000599097 GUCD1Q96NT3 240 aa20.6■□□□□ 0.89
HOMER3-210ENST00000599097 CCPG1Q9ULG6 757 aa20.6■□□□□ 0.89
HOMER3-210ENST00000599097 ARVCFO00192 962 aa20.59■□□□□ 0.89
HOMER3-210ENST00000599097 ICAM1P05362 532 aa20.59■□□□□ 0.89
HOMER3-210ENST00000599097 TOP1P11387 765 aaKnown RBP20.59■□□□□ 0.89
HOMER3-210ENST00000599097 PDE1AP54750 535 aa20.59■□□□□ 0.89
HOMER3-210ENST00000599097 MFSD5Q6N075 450 aa20.59■□□□□ 0.89
HOMER3-210ENST00000599097 KCTD1Q719H9 257 aa20.59■□□□□ 0.89
HOMER3-210ENST00000599097 AGBL1Q96MI9 1066 aa20.59■□□□□ 0.89
HOMER3-210ENST00000599097 FAM161BQ96MY7 647 aa20.59■□□□□ 0.89
HOMER3-210ENST00000599097 MTIF3Q9H2K0 278 aaKnown RBP20.59■□□□□ 0.89
HOMER3-210ENST00000599097 RNF41Q9H4P4 317 aaPredicted RBP20.59■□□□□ 0.89
HOMER3-210ENST00000599097 VTA1Q9NP79 307 aa20.59■□□□□ 0.89
HOMER3-210ENST00000599097 PRR12Q9ULL5 1215 aa20.59■□□□□ 0.89
HOMER3-210ENST00000599097 ZNF536O15090 1300 aa20.58■□□□□ 0.89
HOMER3-210ENST00000599097 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.58■□□□□ 0.89
HOMER3-210ENST00000599097 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.58■□□□□ 0.89
HOMER3-210ENST00000599097 FGRP09769 529 aa20.58■□□□□ 0.89
HOMER3-210ENST00000599097 CNTN2Q02246 1040 aa20.58■□□□□ 0.89
HOMER3-210ENST00000599097 PSRC1Q6PGN9 363 aaPredicted RBP20.58■□□□□ 0.89
HOMER3-210ENST00000599097 TLK2Q86UE8 772 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms