RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 TOMM22Q9NS69 142 aa27.09■■□□□ 1.93
CCDC61-207ENST00000599044 CCDC171Q6TFL3 1326 aa27.09■■□□□ 1.93
CCDC61-207ENST00000599044 SMCHD1A6NHR9 2005 aa27.09■■□□□ 1.93
CCDC61-207ENST00000599044 TRIM60Q495X7 471 aa27.08■■□□□ 1.93
CCDC61-207ENST00000599044 TDHQ8IZJ6 230 aa27.08■■□□□ 1.93
CCDC61-207ENST00000599044 CNPY2Q9Y2B0 182 aa27.08■■□□□ 1.93
CCDC61-207ENST00000599044 SYNGAP1Q96PV0 1343 aa27.08■■□□□ 1.93
CCDC61-207ENST00000599044 LTBP2Q14767 1821 aa27.07■■□□□ 1.92
CCDC61-207ENST00000599044 PLA2G6O60733 806 aa27.07■■□□□ 1.92
CCDC61-207ENST00000599044 CENPBP07199 599 aaPredicted RBP27.07■■□□□ 1.92
CCDC61-207ENST00000599044 AKR1A1P14550 325 aa27.07■■□□□ 1.92
CCDC61-207ENST00000599044 CNTN2Q02246 1040 aa27.07■■□□□ 1.92
CCDC61-207ENST00000599044 SNX17Q15036 470 aa27.07■■□□□ 1.92
CCDC61-207ENST00000599044 PPP4R3BQ5MIZ7 849 aa27.07■■□□□ 1.92
CCDC61-207ENST00000599044 MSL3Q8N5Y2 521 aaKnown RBP27.07■■□□□ 1.92
CCDC61-207ENST00000599044 FBXO40Q9UH90 709 aa27.07■■□□□ 1.92
CCDC61-207ENST00000599044 PRR12Q9ULL5 1215 aa27.07■■□□□ 1.92
CCDC61-207ENST00000599044 PHF24Q9UPV7 400 aa27.07■■□□□ 1.92
CCDC61-207ENST00000599044 ADAMTS4O75173 837 aa27.06■■□□□ 1.92
CCDC61-207ENST00000599044 FDX1P10109 184 aa27.06■■□□□ 1.92
CCDC61-207ENST00000599044 IRX5P78411 483 aaPredicted RBP27.06■■□□□ 1.92
CCDC61-207ENST00000599044 TTBK2Q6IQ55 1244 aa27.06■■□□□ 1.92
CCDC61-207ENST00000599044 CCDC174Q6PII3 467 aa27.06■■□□□ 1.92
CCDC61-207ENST00000599044 ZNF467Q7Z7K2 595 aaPredicted RBP27.06■■□□□ 1.92
CCDC61-207ENST00000599044 TBC1D10CQ8IV04 446 aa27.06■■□□□ 1.92
CCDC61-207ENST00000599044 TMEM47Q9BQJ4 181 aa27.06■■□□□ 1.92
CCDC61-207ENST00000599044 ADCY6O43306 1168 aa27.05■■□□□ 1.92
CCDC61-207ENST00000599044 A1CFQ9NQ94 594 aaKnown RBP27.05■■□□□ 1.92
CCDC61-207ENST00000599044 RNF146Q9NTX7 359 aa27.05■■□□□ 1.92
CCDC61-207ENST00000599044 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.05■■□□□ 1.92
CCDC61-207ENST00000599044 ZHX1Q9UKY1 873 aaPredicted RBP27.05■■□□□ 1.92
CCDC61-207ENST00000599044 ZMYM6O95789 1325 aa27.05■■□□□ 1.92
CCDC61-207ENST00000599044 SLC16A2P36021 539 aa27.04■■□□□ 1.92
CCDC61-207ENST00000599044 ACVR2BQ13705 512 aa27.04■■□□□ 1.92
CCDC61-207ENST00000599044 MUM1L1Q5H9M0 696 aa27.04■■□□□ 1.92
CCDC61-207ENST00000599044 SH3RF1Q7Z6J0 888 aa27.04■■□□□ 1.92
CCDC61-207ENST00000599044 RNF180Q86T96 592 aa27.04■■□□□ 1.92
CCDC61-207ENST00000599044 ACAD9Q9H845 621 aa27.04■■□□□ 1.92
CCDC61-207ENST00000599044 FAM184BQ9ULE4 1060 aa27.04■■□□□ 1.92
CCDC61-207ENST00000599044 DDX49Q9Y6V7 483 aaKnown RBP27.04■■□□□ 1.92
CCDC61-207ENST00000599044 SOWAHBA6NEL2 793 aa27.03■■□□□ 1.92
CCDC61-207ENST00000599044 ALAS1P13196 640 aa27.03■■□□□ 1.92
CCDC61-207ENST00000599044 CCDC96Q2M329 555 aa27.03■■□□□ 1.92
CCDC61-207ENST00000599044 LRIT3Q3SXY7 679 aa27.03■■□□□ 1.92
CCDC61-207ENST00000599044 CWC27Q6UX04 472 aaKnown RBP27.03■■□□□ 1.92
CCDC61-207ENST00000599044 FAM133AQ8N9E0 248 aa27.03■■□□□ 1.92
CCDC61-207ENST00000599044 TRERF1Q96PN7 1200 aa27.03■■□□□ 1.92
CCDC61-207ENST00000599044 TCP11L1Q9NUJ3 509 aa27.03■■□□□ 1.92
CCDC61-207ENST00000599044 SYNRGQ9UMZ2 1314 aa27.03■■□□□ 1.92
CCDC61-207ENST00000599044 FRMPD2Q68DX3 1309 aaPredicted RBP27.02■■□□□ 1.92
CCDC61-207ENST00000599044 MYADML2A6NDP7 307 aa27.02■■□□□ 1.92
CCDC61-207ENST00000599044 TOP1P11387 765 aaKnown RBP27.02■■□□□ 1.92
CCDC61-207ENST00000599044 AKNAD1Q5T1N1 836 aa27.02■■□□□ 1.92
CCDC61-207ENST00000599044 GPR153Q6NV75 609 aa27.02■■□□□ 1.92
CCDC61-207ENST00000599044 ARMCX2Q7L311 632 aa27.02■■□□□ 1.92
CCDC61-207ENST00000599044 CCDC144CPQ8IYA2 1237 aa27.02■■□□□ 1.92
CCDC61-207ENST00000599044 DCAF4Q8WV16 495 aa27.02■■□□□ 1.92
CCDC61-207ENST00000599044 KATNBL1Q9H079 304 aa27.02■■□□□ 1.92
CCDC61-207ENST00000599044 PRDM5Q9NQX1 630 aaPredicted RBP27.02■■□□□ 1.92
CCDC61-207ENST00000599044 ASTN1O14525 1302 aa27.01■■□□□ 1.91
CCDC61-207ENST00000599044 A0A1W2PQ45 241 aaPredicted RBP27.01■■□□□ 1.91
CCDC61-207ENST00000599044 A0A1W2PQY0 241 aa27.01■■□□□ 1.91
CCDC61-207ENST00000599044 TRIM43BA6NCK2 446 aa27.01■■□□□ 1.91
CCDC61-207ENST00000599044 POTEB2H3BUK9 544 aa27.01■■□□□ 1.91
CCDC61-207ENST00000599044 TLE2Q04725 743 aa27.01■■□□□ 1.91
CCDC61-207ENST00000599044 CCDC144BQ3MJ40 725 aa27.01■■□□□ 1.91
CCDC61-207ENST00000599044 C1orf53Q5VUE5 145 aa27.01■■□□□ 1.91
CCDC61-207ENST00000599044 CCSAPQ6IQ19 270 aaPredicted RBP27.01■■□□□ 1.91
CCDC61-207ENST00000599044 MFSD6Q6ZSS7 791 aa27.01■■□□□ 1.91
CCDC61-207ENST00000599044 KLHDC9Q8NEP7 349 aa27.01■■□□□ 1.91
CCDC61-207ENST00000599044 TRIM43Q96BQ3 446 aaPredicted RBP27.01■■□□□ 1.91
CCDC61-207ENST00000599044 LBHD1Q9BQE6 289 aaPredicted RBP27.01■■□□□ 1.91
CCDC61-207ENST00000599044 GPCPD1Q9NPB8 672 aa27.01■■□□□ 1.91
CCDC61-207ENST00000599044 PDLIM7Q9NR12 457 aa27.01■■□□□ 1.91
CCDC61-207ENST00000599044 NEDD4P46934 1319 aa27■■□□□ 1.91
CCDC61-207ENST00000599044 PURBQ96QR8 312 aaKnown RBP27■■□□□ 1.91
CCDC61-207ENST00000599044 ABHD16BQ9H3Z7 469 aa27■■□□□ 1.91
CCDC61-207ENST00000599044 PRKAG2Q9UGJ0 569 aa27■■□□□ 1.91
CCDC61-207ENST00000599044 LAMA2P24043 3122 aaKnown RBP26.99■■□□□ 1.91
CCDC61-207ENST00000599044 PDE4AP27815 886 aa26.99■■□□□ 1.91
CCDC61-207ENST00000599044 ACLYP53396 1101 aa26.99■■□□□ 1.91
CCDC61-207ENST00000599044 KCNA10Q16322 511 aa26.99■■□□□ 1.91
CCDC61-207ENST00000599044 TKFCQ3LXA3 575 aa26.99■■□□□ 1.91
CCDC61-207ENST00000599044 BTNL9Q6UXG8 535 aa26.99■■□□□ 1.91
CCDC61-207ENST00000599044 ZKSCAN3Q9BRR0 538 aa26.99■■□□□ 1.91
CCDC61-207ENST00000599044 RANBP17Q9H2T7 1088 aaKnown RBP26.99■■□□□ 1.91
CCDC61-207ENST00000599044 DUSP11O75319 330 aaKnown RBP26.98■■□□□ 1.91
CCDC61-207ENST00000599044 ITGB8P26012 769 aa26.98■■□□□ 1.91
CCDC61-207ENST00000599044 Q7L0L9 218 aa26.98■■□□□ 1.91
CCDC61-207ENST00000599044 BADQ92934 168 aa26.98■■□□□ 1.91
CCDC61-207ENST00000599044 IL25Q9H293 177 aa26.98■■□□□ 1.91
CCDC61-207ENST00000599044 DIAPH3Q9NSV4 1193 aa26.98■■□□□ 1.91
CCDC61-207ENST00000599044 CYP39A1Q9NYL5 469 aa26.98■■□□□ 1.91
CCDC61-207ENST00000599044 CCPG1Q9ULG6 757 aa26.98■■□□□ 1.91
CCDC61-207ENST00000599044 CUL9Q8IWT3 2517 aa26.97■■□□□ 1.91
CCDC61-207ENST00000599044 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.97■■□□□ 1.91
CCDC61-207ENST00000599044 ICAM1P05362 532 aa26.97■■□□□ 1.91
CCDC61-207ENST00000599044 PDHBP11177 359 aa26.97■■□□□ 1.91
CCDC61-207ENST00000599044 PTGS1P23219 599 aa26.97■■□□□ 1.91
CCDC61-207ENST00000599044 MFAP1P55081 439 aaKnown RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms