RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 AGBL1Q96MI9 1066 aa20.65■□□□□ 0.9
USHBP1-209ENST00000598570 TMEM106CQ9BVX2 250 aa20.65■□□□□ 0.9
USHBP1-209ENST00000598570 LY9Q9HBG7 655 aa20.65■□□□□ 0.9
USHBP1-209ENST00000598570 SENP2Q9HC62 589 aa20.65■□□□□ 0.9
USHBP1-209ENST00000598570 IFIT3O14879 490 aaKnown RBP20.64■□□□□ 0.89
USHBP1-209ENST00000598570 SLC16A2P36021 539 aa20.64■□□□□ 0.89
USHBP1-209ENST00000598570 CACNB2Q08289 660 aaPredicted RBP20.64■□□□□ 0.89
USHBP1-209ENST00000598570 ZNF467Q7Z7K2 595 aaPredicted RBP20.64■□□□□ 0.89
USHBP1-209ENST00000598570 MSL3Q8N5Y2 521 aaKnown RBP20.64■□□□□ 0.89
USHBP1-209ENST00000598570 MMP19Q99542 508 aa20.64■□□□□ 0.89
USHBP1-209ENST00000598570 GPCPD1Q9NPB8 672 aa20.64■□□□□ 0.89
USHBP1-209ENST00000598570 SLC5A4Q9NY91 659 aa20.64■□□□□ 0.89
USHBP1-209ENST00000598570 MAD2L2Q9UI95 211 aa20.64■□□□□ 0.89
USHBP1-209ENST00000598570 PLXNA1Q9UIW2 1896 aa20.64■□□□□ 0.89
USHBP1-209ENST00000598570 FRMPD2Q68DX3 1309 aaPredicted RBP20.63■□□□□ 0.89
USHBP1-209ENST00000598570 REC8O95072 547 aa20.63■□□□□ 0.89
USHBP1-209ENST00000598570 SGPL1O95470 568 aa20.63■□□□□ 0.89
USHBP1-209ENST00000598570 ZKSCAN1P17029 563 aaPredicted RBP20.63■□□□□ 0.89
USHBP1-209ENST00000598570 KCTD2Q14681 263 aa20.63■□□□□ 0.89
USHBP1-209ENST00000598570 SART3Q15020 963 aaKnown RBP20.63■□□□□ 0.89
USHBP1-209ENST00000598570 CCDC96Q2M329 555 aa20.63■□□□□ 0.89
USHBP1-209ENST00000598570 MAMDC4Q6UXC1 1216 aa20.63■□□□□ 0.89
USHBP1-209ENST00000598570 DPP9Q86TI2 863 aa20.63■□□□□ 0.89
USHBP1-209ENST00000598570 SGMS1Q86VZ5 419 aa20.63■□□□□ 0.89
USHBP1-209ENST00000598570 CPXCR1Q8N123 301 aa20.63■□□□□ 0.89
USHBP1-209ENST00000598570 FBXL16Q8N461 479 aa20.63■□□□□ 0.89
USHBP1-209ENST00000598570 SHISA4Q96DD7 197 aa20.63■□□□□ 0.89
USHBP1-209ENST00000598570 MAML3Q96JK9 1138 aa20.63■□□□□ 0.89
USHBP1-209ENST00000598570 RNF208Q9H0X6 261 aa20.63■□□□□ 0.89
USHBP1-209ENST00000598570 NRBP1Q9UHY1 535 aa20.63■□□□□ 0.89
USHBP1-209ENST00000598570 SH2B2O14492 632 aaPredicted RBP20.62■□□□□ 0.89
USHBP1-209ENST00000598570 PRC1O43663 620 aa20.62■□□□□ 0.89
USHBP1-209ENST00000598570 EN2P19622 333 aaPredicted RBP20.62■□□□□ 0.89
USHBP1-209ENST00000598570 KRT32Q14532 448 aa20.62■□□□□ 0.89
USHBP1-209ENST00000598570 GRM4Q14833 912 aa20.62■□□□□ 0.89
USHBP1-209ENST00000598570 WTAPQ15007 396 aa20.62■□□□□ 0.89
USHBP1-209ENST00000598570 SLC35G1Q2M3R5 365 aa20.62■□□□□ 0.89
USHBP1-209ENST00000598570 WDR78Q5VTH9 848 aa20.62■□□□□ 0.89
USHBP1-209ENST00000598570 SAMD1Q6SPF0 538 aaPredicted RBP20.62■□□□□ 0.89
USHBP1-209ENST00000598570 RGS22Q8NE09 1264 aa20.62■□□□□ 0.89
USHBP1-209ENST00000598570 FGD4Q96M96 766 aa20.62■□□□□ 0.89
USHBP1-209ENST00000598570 USP26Q9BXU7 913 aa20.62■□□□□ 0.89
USHBP1-209ENST00000598570 BIN2Q9UBW5 565 aaPredicted RBP20.62■□□□□ 0.89
USHBP1-209ENST00000598570 MKI67P46013 3256 aaKnown RBP20.62■□□□□ 0.89
USHBP1-209ENST00000598570 PARP1P09874 1014 aaKnown RBP20.61■□□□□ 0.89
USHBP1-209ENST00000598570 GOLGA8HP0CJ92 632 aa20.61■□□□□ 0.89
USHBP1-209ENST00000598570 PRKAR2AP13861 404 aaKnown RBP20.61■□□□□ 0.89
USHBP1-209ENST00000598570 SMARCA1P28370 1054 aa20.61■□□□□ 0.89
USHBP1-209ENST00000598570 ADCK5Q3MIX3 580 aa20.61■□□□□ 0.89
USHBP1-209ENST00000598570 TMEM67Q5HYA8 995 aa20.61■□□□□ 0.89
USHBP1-209ENST00000598570 MFSD14CQ5VZR4 134 aa20.61■□□□□ 0.89
USHBP1-209ENST00000598570 LHX8Q68G74 356 aa20.61■□□□□ 0.89
USHBP1-209ENST00000598570 CHST3Q7LGC8 479 aa20.61■□□□□ 0.89
USHBP1-209ENST00000598570 ADGRF4Q8IZF3 695 aa20.61■□□□□ 0.89
USHBP1-209ENST00000598570 FAM133AQ8N9E0 248 aa20.61■□□□□ 0.89
USHBP1-209ENST00000598570 CLEC4DQ8WXI8 215 aa20.61■□□□□ 0.89
USHBP1-209ENST00000598570 NEK1Q96PY6 1258 aa20.61■□□□□ 0.89
USHBP1-209ENST00000598570 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.61■□□□□ 0.89
USHBP1-209ENST00000598570 RIOX1Q9H6W3 641 aa20.61■□□□□ 0.89
USHBP1-209ENST00000598570 CWC22Q9HCG8 908 aaKnown RBP20.61■□□□□ 0.89
USHBP1-209ENST00000598570 HMX1Q9NP08 348 aaPredicted RBP20.61■□□□□ 0.89
USHBP1-209ENST00000598570 ERICH2A1L162 156 aa20.6■□□□□ 0.89
USHBP1-209ENST00000598570 IKQ13123 557 aaPredicted RBP20.6■□□□□ 0.89
USHBP1-209ENST00000598570 DHX32Q7L7V1 743 aaKnown RBP20.6■□□□□ 0.89
USHBP1-209ENST00000598570 STAG2Q8N3U4 1231 aa20.6■□□□□ 0.89
USHBP1-209ENST00000598570 TRPV1Q8NER1 839 aa20.6■□□□□ 0.89
USHBP1-209ENST00000598570 U2AF1L4Q8WU68 220 aaKnown RBP20.6■□□□□ 0.89
USHBP1-209ENST00000598570 TRERF1Q96PN7 1200 aa20.6■□□□□ 0.89
USHBP1-209ENST00000598570 ACAD9Q9H845 621 aa20.6■□□□□ 0.89
USHBP1-209ENST00000598570 JMJD4Q9H9V9 463 aa20.6■□□□□ 0.89
USHBP1-209ENST00000598570 A1CFQ9NQ94 594 aaKnown RBP20.6■□□□□ 0.89
USHBP1-209ENST00000598570 GPHNQ9NQX3 736 aaPredicted RBP20.6■□□□□ 0.89
USHBP1-209ENST00000598570 CTDP1Q9Y5B0 961 aaPredicted RBP20.6■□□□□ 0.89
USHBP1-209ENST00000598570 KLRF2D3W0D1 207 aa20.59■□□□□ 0.89
USHBP1-209ENST00000598570 DDAH1O94760 285 aa20.59■□□□□ 0.89
USHBP1-209ENST00000598570 PGK2P07205 417 aa20.59■□□□□ 0.89
USHBP1-209ENST00000598570 HMGB1P09429 215 aaKnown RBP20.59■□□□□ 0.89
USHBP1-209ENST00000598570 CYBAP13498 195 aa20.59■□□□□ 0.89
USHBP1-209ENST00000598570 SNAP25P60880 206 aa20.59■□□□□ 0.89
USHBP1-209ENST00000598570 CHMP4CQ96CF2 233 aa20.59■□□□□ 0.89
USHBP1-209ENST00000598570 IL17RAQ96F46 866 aa20.59■□□□□ 0.89
USHBP1-209ENST00000598570 TINF2Q9BSI4 451 aa20.59■□□□□ 0.89
USHBP1-209ENST00000598570 UBA5Q9GZZ9 404 aa20.59■□□□□ 0.89
USHBP1-209ENST00000598570 RNF146Q9NTX7 359 aa20.59■□□□□ 0.89
USHBP1-209ENST00000598570 OGDHLQ9ULD0 1010 aa20.59■□□□□ 0.89
USHBP1-209ENST00000598570 MTMR7Q9Y216 660 aa20.59■□□□□ 0.89
USHBP1-209ENST00000598570 SNX14Q9Y5W7 946 aa20.59■□□□□ 0.89
USHBP1-209ENST00000598570 PFASO15067 1338 aa20.58■□□□□ 0.89
USHBP1-209ENST00000598570 SYNGAP1Q96PV0 1343 aa20.58■□□□□ 0.89
USHBP1-209ENST00000598570 MNX1P50219 401 aaPredicted RBP20.58■□□□□ 0.89
USHBP1-209ENST00000598570 GHRHRQ02643 423 aa20.58■□□□□ 0.89
USHBP1-209ENST00000598570 MUM1L1Q5H9M0 696 aa20.58■□□□□ 0.89
USHBP1-209ENST00000598570 MORC4Q8TE76 937 aa20.58■□□□□ 0.89
USHBP1-209ENST00000598570 AGXT2Q9BYV1 514 aa20.58■□□□□ 0.89
USHBP1-209ENST00000598570 CYP39A1Q9NYL5 469 aa20.58■□□□□ 0.89
USHBP1-209ENST00000598570 CCPG1Q9ULG6 757 aa20.58■□□□□ 0.89
USHBP1-209ENST00000598570 LOC102724159A0A0B4J2E5 919 aa20.57■□□□□ 0.88
USHBP1-209ENST00000598570 CYP2C19P33261 490 aa20.57■□□□□ 0.88
USHBP1-209ENST00000598570 PWP2Q15269 919 aaKnown RBP20.57■□□□□ 0.88
USHBP1-209ENST00000598570 PDE4DIPQ5VU43 2346 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms