RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 CCPG1Q9ULG6 757 aa17.18■□□□□ 0.34
XRCC1-208ENST00000598422 KBTBD13C9JR72 458 aa17.17■□□□□ 0.34
XRCC1-208ENST00000598422 DNM1LO00429 736 aa17.17■□□□□ 0.34
XRCC1-208ENST00000598422 RARBP10826 455 aa17.17■□□□□ 0.34
XRCC1-208ENST00000598422 SNAP25P60880 206 aa17.17■□□□□ 0.34
XRCC1-208ENST00000598422 TTBK2Q6IQ55 1244 aa17.17■□□□□ 0.34
XRCC1-208ENST00000598422 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.17■□□□□ 0.34
XRCC1-208ENST00000598422 CENPQQ7L2Z9 268 aaPredicted RBP17.17■□□□□ 0.34
XRCC1-208ENST00000598422 TRERF1Q96PN7 1200 aa17.17■□□□□ 0.34
XRCC1-208ENST00000598422 KAT14Q9H8E8 782 aa17.17■□□□□ 0.34
XRCC1-208ENST00000598422 PFASO15067 1338 aa17.17■□□□□ 0.34
XRCC1-208ENST00000598422 ZNF536O15090 1300 aa17.17■□□□□ 0.34
XRCC1-208ENST00000598422 SYNGAP1Q96PV0 1343 aa17.17■□□□□ 0.34
XRCC1-208ENST00000598422 DNAJC25-GNG10A0A024R161 153 aa17.16■□□□□ 0.34
XRCC1-208ENST00000598422 POTEB2H3BUK9 544 aa17.16■□□□□ 0.34
XRCC1-208ENST00000598422 COL6A1P12109 1028 aa17.16■□□□□ 0.34
XRCC1-208ENST00000598422 ZNF543Q08ER8 600 aa17.16■□□□□ 0.34
XRCC1-208ENST00000598422 TRDNQ13061 729 aa17.16■□□□□ 0.34
XRCC1-208ENST00000598422 CHRDL2Q6WN34 429 aa17.16■□□□□ 0.34
XRCC1-208ENST00000598422 ZNF467Q7Z7K2 595 aaPredicted RBP17.16■□□□□ 0.34
XRCC1-208ENST00000598422 ZSCAN10Q96SZ4 725 aaPredicted RBP17.16■□□□□ 0.34
XRCC1-208ENST00000598422 SENP6Q9GZR1 1112 aaPredicted RBP17.16■□□□□ 0.34
XRCC1-208ENST00000598422 RANBP17Q9H2T7 1088 aaKnown RBP17.16■□□□□ 0.34
XRCC1-208ENST00000598422 ZHX1Q9UKY1 873 aaPredicted RBP17.16■□□□□ 0.34
XRCC1-208ENST00000598422 PNMA2Q9UL42 364 aa17.16■□□□□ 0.34
XRCC1-208ENST00000598422 U3KPZ7 1027 aaPredicted RBP17.16■□□□□ 0.34
XRCC1-208ENST00000598422 PARP14Q460N5 1801 aa17.15■□□□□ 0.34
XRCC1-208ENST00000598422 ICAM1P05362 532 aa17.15■□□□□ 0.34
XRCC1-208ENST00000598422 AKR1A1P14550 325 aa17.15■□□□□ 0.34
XRCC1-208ENST00000598422 HABP4Q5JVS0 413 aaKnown RBP17.15■□□□□ 0.34
XRCC1-208ENST00000598422 GPATCH4Q5T3I0 446 aaKnown RBP17.15■□□□□ 0.34
XRCC1-208ENST00000598422 BTNL9Q6UXG8 535 aa17.15■□□□□ 0.34
XRCC1-208ENST00000598422 PNMA1Q8ND90 353 aa17.15■□□□□ 0.34
XRCC1-208ENST00000598422 A1CFQ9NQ94 594 aaKnown RBP17.15■□□□□ 0.34
XRCC1-208ENST00000598422 XPNPEP3Q9NQH7 507 aa17.15■□□□□ 0.34
XRCC1-208ENST00000598422 COLQQ9Y215 455 aaPredicted RBP17.15■□□□□ 0.34
XRCC1-208ENST00000598422 MYH4Q9Y623 1939 aa17.15■□□□□ 0.34
XRCC1-208ENST00000598422 TNKSO95271 1327 aa17.15■□□□□ 0.34
XRCC1-208ENST00000598422 SGSM2O43147 1006 aa17.14■□□□□ 0.33
XRCC1-208ENST00000598422 SNHG28P0DPA3 235 aa17.14■□□□□ 0.33
XRCC1-208ENST00000598422 TAL1P17542 331 aaPredicted RBP17.14■□□□□ 0.33
XRCC1-208ENST00000598422 GJC2Q5T442 439 aaPredicted RBP17.14■□□□□ 0.33
XRCC1-208ENST00000598422 MAMDC4Q6UXC1 1216 aa17.14■□□□□ 0.33
XRCC1-208ENST00000598422 NSMFQ6X4W1 530 aa17.14■□□□□ 0.33
XRCC1-208ENST00000598422 KIAA1211Q6ZU35 1233 aa17.14■□□□□ 0.33
XRCC1-208ENST00000598422 RALYLQ86SE5 291 aaKnown RBP17.14■□□□□ 0.33
XRCC1-208ENST00000598422 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.14■□□□□ 0.33
XRCC1-208ENST00000598422 ZSWIM5Q9P217 1185 aa17.14■□□□□ 0.33
XRCC1-208ENST00000598422 ZMYND8Q9ULU4 1186 aaPredicted RBP17.14■□□□□ 0.33
XRCC1-208ENST00000598422 PTH1RQ03431 593 aa17.13■□□□□ 0.33
XRCC1-208ENST00000598422 IFIT1BQ5T764 474 aaKnown RBP17.13■□□□□ 0.33
XRCC1-208ENST00000598422 ENAHQ8N8S7 591 aaPredicted RBP17.13■□□□□ 0.33
XRCC1-208ENST00000598422 FAM184BQ9ULE4 1060 aa17.13■□□□□ 0.33
XRCC1-208ENST00000598422 SNAI1O95863 264 aaPredicted RBP17.12■□□□□ 0.33
XRCC1-208ENST00000598422 ZNF865P0CJ78 1059 aaPredicted RBP17.12■□□□□ 0.33
XRCC1-208ENST00000598422 GOLGA8HP0CJ92 632 aa17.12■□□□□ 0.33
XRCC1-208ENST00000598422 ATN1P54259 1190 aaPredicted RBP17.12■□□□□ 0.33
XRCC1-208ENST00000598422 LRRC26Q2I0M4 334 aa17.12■□□□□ 0.33
XRCC1-208ENST00000598422 ARMCX2Q7L311 632 aa17.12■□□□□ 0.33
XRCC1-208ENST00000598422 RNF180Q86T96 592 aa17.12■□□□□ 0.33
XRCC1-208ENST00000598422 ANKS1AQ92625 1134 aa17.12■□□□□ 0.33
XRCC1-208ENST00000598422 COL11A1P12107 1806 aaPredicted RBP17.12■□□□□ 0.33
XRCC1-208ENST00000598422 ERICH2A1L162 156 aa17.11■□□□□ 0.33
XRCC1-208ENST00000598422 DHX16O60231 1041 aaKnown RBP17.11■□□□□ 0.33
XRCC1-208ENST00000598422 PGK1P00558 417 aa17.11■□□□□ 0.33
XRCC1-208ENST00000598422 CYP21A2P08686 494 aa17.11■□□□□ 0.33
XRCC1-208ENST00000598422 CNTN2Q02246 1040 aa17.11■□□□□ 0.33
XRCC1-208ENST00000598422 ACVR2BQ13705 512 aa17.11■□□□□ 0.33
XRCC1-208ENST00000598422 LRRC41Q15345 812 aa17.11■□□□□ 0.33
XRCC1-208ENST00000598422 ASPRV1Q53RT3 343 aa17.11■□□□□ 0.33
XRCC1-208ENST00000598422 MUM1L1Q5H9M0 696 aa17.11■□□□□ 0.33
XRCC1-208ENST00000598422 CCDC144CPQ8IYA2 1237 aa17.11■□□□□ 0.33
XRCC1-208ENST00000598422 FAM133AQ8N9E0 248 aa17.11■□□□□ 0.33
XRCC1-208ENST00000598422 LENG1Q96BZ8 264 aaPredicted RBP17.11■□□□□ 0.33
XRCC1-208ENST00000598422 ABHD16BQ9H3Z7 469 aa17.11■□□□□ 0.33
XRCC1-208ENST00000598422 CYP39A1Q9NYL5 469 aa17.11■□□□□ 0.33
XRCC1-208ENST00000598422 PTPDC1A2A3K4 754 aa17.1■□□□□ 0.33
XRCC1-208ENST00000598422 ASB14A6NK59 587 aa17.1■□□□□ 0.33
XRCC1-208ENST00000598422 PARP1P09874 1014 aaKnown RBP17.1■□□□□ 0.33
XRCC1-208ENST00000598422 SYN1P17600 705 aa17.1■□□□□ 0.33
XRCC1-208ENST00000598422 SART3Q15020 963 aaKnown RBP17.1■□□□□ 0.33
XRCC1-208ENST00000598422 FGD4Q96M96 766 aa17.1■□□□□ 0.33
XRCC1-208ENST00000598422 SPC25Q9HBM1 224 aa17.1■□□□□ 0.33
XRCC1-208ENST00000598422 WDR19Q8NEZ3 1342 aa17.1■□□□□ 0.33
XRCC1-208ENST00000598422 NFIBO00712 420 aa17.09■□□□□ 0.33
XRCC1-208ENST00000598422 NEFLP07196 543 aa17.09■□□□□ 0.33
XRCC1-208ENST00000598422 CDC37Q16543 378 aaPredicted RBP17.09■□□□□ 0.33
XRCC1-208ENST00000598422 BMP2KLQ5H9B9 411 aa17.09■□□□□ 0.33
XRCC1-208ENST00000598422 NOL8Q76FK4 1167 aaKnown RBP17.09■□□□□ 0.33
XRCC1-208ENST00000598422 CYB5R4Q7L1T6 521 aa17.09■□□□□ 0.33
XRCC1-208ENST00000598422 NCOA7Q8NI08 942 aa17.09■□□□□ 0.33
XRCC1-208ENST00000598422 CCDC136Q96JN2 1154 aa17.09■□□□□ 0.33
XRCC1-208ENST00000598422 UBA5Q9GZZ9 404 aa17.09■□□□□ 0.33
XRCC1-208ENST00000598422 RBM27Q9P2N5 1060 aaKnown RBP17.09■□□□□ 0.33
XRCC1-208ENST00000598422 ADD3Q9UEY8 706 aaKnown RBP17.09■□□□□ 0.33
XRCC1-208ENST00000598422 PRKAG2Q9UGJ0 569 aa17.09■□□□□ 0.33
XRCC1-208ENST00000598422 RBM8AQ9Y5S9 174 aaKnown RBP17.09■□□□□ 0.33
XRCC1-208ENST00000598422 LAMA4Q16363 1823 aa17.09■□□□□ 0.33
XRCC1-208ENST00000598422 SYNRGQ9UMZ2 1314 aa17.08■□□□□ 0.32
XRCC1-208ENST00000598422 SOWAHBA6NEL2 793 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms