RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 FEM1BQ9UK73 627 aa17.41■□□□□ 0.38
VRK3-207ENST00000594092 OTOFQ9HC10 1997 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 DCAF8L1A6NGE4 600 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 GNA11P29992 359 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 SNAP25P60880 206 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 SF3A1Q15459 793 aaKnown RBP17.4■□□□□ 0.38
VRK3-207ENST00000594092 FAM160B2Q86V87 743 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 RASGRP4Q8TDF6 673 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 PCDHA6Q9UN73 950 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 PCDHA8Q9Y5H6 950 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 GOLGA6L4A6NEF3 574 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 TRIM75PA6NK02 468 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 STK38Q15208 465 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 MAP1SQ66K74 1059 aaPredicted RBP17.4■□□□□ 0.38
VRK3-207ENST00000594092 PIK3AP1Q6ZUJ8 805 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 PGBD1Q96JS3 809 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 FBXO28Q9NVF7 368 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 CSADQ9Y600 493 aa17.4■□□□□ 0.38
VRK3-207ENST00000594092 VCAM1P19320 739 aa17.39■□□□□ 0.37
VRK3-207ENST00000594092 SLC39A14Q15043 492 aa17.39■□□□□ 0.37
VRK3-207ENST00000594092 TPRNQ4KMQ1 711 aa17.39■□□□□ 0.37
VRK3-207ENST00000594092 KIFC2Q96AC6 838 aa17.39■□□□□ 0.37
VRK3-207ENST00000594092 AFG3L2Q9Y4W6 797 aa17.39■□□□□ 0.37
VRK3-207ENST00000594092 SPTLC2O15270 562 aa17.38■□□□□ 0.37
VRK3-207ENST00000594092 DEKP35659 375 aaKnown RBP17.38■□□□□ 0.37
VRK3-207ENST00000594092 ADCY7P51828 1080 aa17.38■□□□□ 0.37
VRK3-207ENST00000594092 PTPAQ15257 358 aa17.38■□□□□ 0.37
VRK3-207ENST00000594092 MAP3K11Q16584 847 aa17.38■□□□□ 0.37
VRK3-207ENST00000594092 MOB2Q70IA6 237 aa17.38■□□□□ 0.37
VRK3-207ENST00000594092 FBXO11Q86XK2 927 aa17.38■□□□□ 0.37
VRK3-207ENST00000594092 KCNG4Q8TDN1 519 aa17.38■□□□□ 0.37
VRK3-207ENST00000594092 AMNQ9BXJ7 453 aa17.38■□□□□ 0.37
VRK3-207ENST00000594092 PCDHB6Q9Y5E3 794 aa17.38■□□□□ 0.37
VRK3-207ENST00000594092 PCDHA1Q9Y5I3 950 aa17.38■□□□□ 0.37
VRK3-207ENST00000594092 C19orf81C9J6K1 198 aa17.37■□□□□ 0.37
VRK3-207ENST00000594092 ATP2B1P20020 1258 aa17.37■□□□□ 0.37
VRK3-207ENST00000594092 HMGCS2P54868 508 aa17.37■□□□□ 0.37
VRK3-207ENST00000594092 TTLL12Q14166 644 aaPredicted RBP17.37■□□□□ 0.37
VRK3-207ENST00000594092 BICD2Q8TD16 824 aa17.37■□□□□ 0.37
VRK3-207ENST00000594092 C12orf42Q96LP6 360 aa17.37■□□□□ 0.37
VRK3-207ENST00000594092 RANBP17Q9H2T7 1088 aaKnown RBP17.37■□□□□ 0.37
VRK3-207ENST00000594092 RIC8AQ9NPQ8 531 aa17.37■□□□□ 0.37
VRK3-207ENST00000594092 TMEM63CQ9P1W3 806 aa17.37■□□□□ 0.37
VRK3-207ENST00000594092 NOL7Q9UMY1 257 aaKnown RBP17.37■□□□□ 0.37
VRK3-207ENST00000594092 CCDC194A0A1B0GVG4 234 aa17.37■□□□□ 0.37
VRK3-207ENST00000594092 ME1P48163 572 aa17.37■□□□□ 0.37
VRK3-207ENST00000594092 ZSCAN23Q3MJ62 389 aa17.37■□□□□ 0.37
VRK3-207ENST00000594092 ANKRD13AQ8IZ07 590 aa17.37■□□□□ 0.37
VRK3-207ENST00000594092 RPAP3Q9H6T3 665 aaPredicted RBP17.37■□□□□ 0.37
VRK3-207ENST00000594092 PCDHA7Q9UN72 937 aa17.37■□□□□ 0.37
VRK3-207ENST00000594092 TRAF5O00463 557 aa17.36■□□□□ 0.37
VRK3-207ENST00000594092 WNT7AO00755 349 aa17.36■□□□□ 0.37
VRK3-207ENST00000594092 TRAPPC10P48553 1259 aa17.36■□□□□ 0.37
VRK3-207ENST00000594092 SAMD1Q6SPF0 538 aaPredicted RBP17.36■□□□□ 0.37
VRK3-207ENST00000594092 KRT25Q7Z3Z0 450 aa17.36■□□□□ 0.37
VRK3-207ENST00000594092 REXO1Q8N1G1 1221 aaKnown RBP17.36■□□□□ 0.37
VRK3-207ENST00000594092 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
VRK3-207ENST00000594092 CLMNQ96JQ2 1002 aa17.36■□□□□ 0.37
VRK3-207ENST00000594092 SLF1Q9BQI6 1058 aa17.36■□□□□ 0.37
VRK3-207ENST00000594092 TANGO6Q9C0B7 1094 aa17.36■□□□□ 0.37
VRK3-207ENST00000594092 NMRK2Q9NPI5 230 aa17.36■□□□□ 0.37
VRK3-207ENST00000594092 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.36■□□□□ 0.37
VRK3-207ENST00000594092 FMR1Q06787 632 aaKnown RBP eCLIP17.35■□□□□ 0.37
VRK3-207ENST00000594092 USH1GQ495M9 461 aa17.35■□□□□ 0.37
VRK3-207ENST00000594092 TTC38Q5R3I4 469 aa17.35■□□□□ 0.37
VRK3-207ENST00000594092 ARMC9Q7Z3E5 817 aa17.35■□□□□ 0.37
VRK3-207ENST00000594092 LDHDQ86WU2 507 aa17.35■□□□□ 0.37
VRK3-207ENST00000594092 PRPF38AQ8NAV1 312 aaKnown RBP17.35■□□□□ 0.37
VRK3-207ENST00000594092 CUL5Q93034 780 aa17.35■□□□□ 0.37
VRK3-207ENST00000594092 PSTPIP2Q9H939 334 aa17.35■□□□□ 0.37
VRK3-207ENST00000594092 ELP3Q9H9T3 547 aa17.35■□□□□ 0.37
VRK3-207ENST00000594092 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.35■□□□□ 0.37
VRK3-207ENST00000594092 BIN2Q9UBW5 565 aaPredicted RBP17.35■□□□□ 0.37
VRK3-207ENST00000594092 PPP6R2O75170 966 aa17.35■□□□□ 0.37
VRK3-207ENST00000594092 TAL1P17542 331 aaPredicted RBP17.35■□□□□ 0.37
VRK3-207ENST00000594092 MARCKSP29966 332 aaPredicted RBP17.35■□□□□ 0.37
VRK3-207ENST00000594092 MRPL12P52815 198 aaKnown RBP17.35■□□□□ 0.37
VRK3-207ENST00000594092 SH3D19Q5HYK7 790 aa17.35■□□□□ 0.37
VRK3-207ENST00000594092 JAKMIP3Q5VZ66 844 aa17.35■□□□□ 0.37
VRK3-207ENST00000594092 CCDC174Q6PII3 467 aa17.35■□□□□ 0.37
VRK3-207ENST00000594092 RBM46Q8TBY0 533 aaKnown RBP17.35■□□□□ 0.37
VRK3-207ENST00000594092 TMEM260Q9NX78 707 aa17.35■□□□□ 0.37
VRK3-207ENST00000594092 GOLGA6L3A6NEY3 463 aa17.34■□□□□ 0.37
VRK3-207ENST00000594092 FLOT1O75955 427 aa17.34■□□□□ 0.37
VRK3-207ENST00000594092 CLK2P49760 499 aaKnown RBP17.34■□□□□ 0.37
VRK3-207ENST00000594092 ZNF445P59923 1031 aa17.34■□□□□ 0.37
VRK3-207ENST00000594092 UBE2SQ16763 222 aa17.34■□□□□ 0.37
VRK3-207ENST00000594092 INF2Q27J81 1249 aa17.34■□□□□ 0.37
VRK3-207ENST00000594092 CCDC183Q5T5S1 534 aa17.34■□□□□ 0.37
VRK3-207ENST00000594092 ERO1BQ86YB8 467 aa17.34■□□□□ 0.37
VRK3-207ENST00000594092 GLT8D2Q9H1C3 349 aa17.34■□□□□ 0.37
VRK3-207ENST00000594092 TMOD4Q9NZQ9 345 aa17.34■□□□□ 0.37
VRK3-207ENST00000594092 PPP1R9AQ9ULJ8 1098 aa17.34■□□□□ 0.37
VRK3-207ENST00000594092 CEP131Q9UPN4 1083 aa17.34■□□□□ 0.37
VRK3-207ENST00000594092 LIG1P18858 919 aa17.33■□□□□ 0.37
VRK3-207ENST00000594092 PPATQ06203 517 aa17.33■□□□□ 0.37
VRK3-207ENST00000594092 TRAF1Q13077 416 aa17.33■□□□□ 0.37
VRK3-207ENST00000594092 NONOQ15233 471 aaKnown RBP eCLIP17.33■□□□□ 0.37
VRK3-207ENST00000594092 ZNF174Q15697 407 aa17.33■□□□□ 0.37
VRK3-207ENST00000594092 AXDND1Q5T1B0 1012 aaPredicted RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms