RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PALM3A6NDB9 673 aaPredicted RBP22.82■■□□□ 1.24
LSM4-203ENST00000593829 DDAH1O94760 285 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 CPA1P15085 419 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 CASTP20810 708 aaKnown RBP22.82■■□□□ 1.24
LSM4-203ENST00000593829 CCDC174Q6PII3 467 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 STAG2Q8N3U4 1231 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 NUP133Q8WUM0 1156 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 ABHD8Q96I13 439 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 C22orf23Q9BZE7 217 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 CPVLQ9H3G5 476 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 ZNF536O15090 1300 aa22.82■■□□□ 1.24
LSM4-203ENST00000593829 FGD1P98174 961 aa22.81■■□□□ 1.24
LSM4-203ENST00000593829 MAP3K14Q99558 947 aa22.81■■□□□ 1.24
LSM4-203ENST00000593829 RIPK3Q9Y572 518 aa22.81■■□□□ 1.24
LSM4-203ENST00000593829 SLC12A7Q9Y666 1083 aa22.81■■□□□ 1.24
LSM4-203ENST00000593829 KLRF2D3W0D1 207 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 RPS6KB1P23443 525 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 GRB14Q14449 540 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 SLC9C1Q4G0N8 1177 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 USP6NLQ92738 828 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 AGBL1Q96MI9 1066 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 TM6SF1Q9BZW5 370 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 DOCK3Q8IZD9 2030 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 CALM1P0DP23 149 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 CALM2P0DP24 149 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 CALM3P0DP25 149 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 FCER1AP12319 257 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 RGS2P41220 211 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 ANAPC15P60006 121 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 ABRAQ8N0Z2 381 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 MYL10Q9BUA6 226 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 ZSWIM6Q9HCJ5 1215 aa22.8■■□□□ 1.24
LSM4-203ENST00000593829 ADCY3O60266 1144 aa22.79■■□□□ 1.24
LSM4-203ENST00000593829 ICAM1P05362 532 aa22.79■■□□□ 1.24
LSM4-203ENST00000593829 CYP2B6P20813 491 aa22.79■■□□□ 1.24
LSM4-203ENST00000593829 GRK4P32298 578 aa22.79■■□□□ 1.24
LSM4-203ENST00000593829 KIF5BP33176 963 aa22.79■■□□□ 1.24
LSM4-203ENST00000593829 MAP2K5Q13163 448 aa22.79■■□□□ 1.24
LSM4-203ENST00000593829 SYNE3Q6ZMZ3 975 aa22.79■■□□□ 1.24
LSM4-203ENST00000593829 NBPF11Q86T75 865 aa22.79■■□□□ 1.24
LSM4-203ENST00000593829 ADGRF4Q8IZF3 695 aa22.79■■□□□ 1.24
LSM4-203ENST00000593829 SLAIN1Q8ND83 568 aa22.79■■□□□ 1.24
LSM4-203ENST00000593829 CTCFLQ8NI51 663 aaPredicted RBP22.79■■□□□ 1.24
LSM4-203ENST00000593829 PXYLP1Q8TE99 480 aa22.79■■□□□ 1.24
LSM4-203ENST00000593829 PNMA2Q9UL42 364 aa22.79■■□□□ 1.24
LSM4-203ENST00000593829 HTTP42858 3142 aa22.79■■□□□ 1.24
LSM4-203ENST00000593829 DHX16O60231 1041 aaKnown RBP22.78■■□□□ 1.24
LSM4-203ENST00000593829 XRCC5P13010 732 aaKnown RBP22.78■■□□□ 1.24
LSM4-203ENST00000593829 TKFCQ3LXA3 575 aa22.78■■□□□ 1.24
LSM4-203ENST00000593829 RUFY3Q7L099 469 aa22.78■■□□□ 1.24
LSM4-203ENST00000593829 CHST13Q8NET6 341 aa22.78■■□□□ 1.24
LSM4-203ENST00000593829 FBXO40Q9UH90 709 aa22.78■■□□□ 1.24
LSM4-203ENST00000593829 CCPG1Q9ULG6 757 aa22.78■■□□□ 1.24
LSM4-203ENST00000593829 CYP46A1Q9Y6A2 500 aa22.78■■□□□ 1.24
LSM4-203ENST00000593829 ADORA2AP29274 412 aa22.78■■□□□ 1.24
LSM4-203ENST00000593829 KCTD2Q14681 263 aa22.78■■□□□ 1.24
LSM4-203ENST00000593829 Q6ZUG5 572 aa22.78■■□□□ 1.24
LSM4-203ENST00000593829 MMP19Q99542 508 aa22.78■■□□□ 1.24
LSM4-203ENST00000593829 PLXNB2O15031 1838 aa22.78■■□□□ 1.24
LSM4-203ENST00000593829 GOLGA6L3A6NEY3 463 aa22.77■■□□□ 1.24
LSM4-203ENST00000593829 DPP9Q86TI2 863 aa22.77■■□□□ 1.24
LSM4-203ENST00000593829 FBXL16Q8N461 479 aa22.77■■□□□ 1.24
LSM4-203ENST00000593829 SH3TC2Q8TF17 1288 aa22.77■■□□□ 1.24
LSM4-203ENST00000593829 ARMC5Q96C12 935 aa22.77■■□□□ 1.24
LSM4-203ENST00000593829 APBA2Q99767 749 aa22.77■■□□□ 1.24
LSM4-203ENST00000593829 JMJD4Q9H9V9 463 aa22.77■■□□□ 1.24
LSM4-203ENST00000593829 VAT1LQ9HCJ6 419 aa22.77■■□□□ 1.24
LSM4-203ENST00000593829 HOMER2Q9NSB8 354 aa22.77■■□□□ 1.24
LSM4-203ENST00000593829 ALAS1P13196 640 aa22.76■■□□□ 1.23
LSM4-203ENST00000593829 CDC37Q16543 378 aaPredicted RBP22.76■■□□□ 1.23
LSM4-203ENST00000593829 APOA5Q6Q788 366 aa22.76■■□□□ 1.23
LSM4-203ENST00000593829 TRERF1Q96PN7 1200 aa22.76■■□□□ 1.23
LSM4-203ENST00000593829 HOXC6P09630 235 aa22.76■■□□□ 1.23
LSM4-203ENST00000593829 ELNP15502 786 aa22.76■■□□□ 1.23
LSM4-203ENST00000593829 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.76■■□□□ 1.231e-7■■■□□ 16
LSM4-203ENST00000593829 TRMT44Q8IYL2 757 aaKnown RBP22.76■■□□□ 1.23
LSM4-203ENST00000593829 ACAD9Q9H845 621 aa22.76■■□□□ 1.23
LSM4-203ENST00000593829 RNF146Q9NTX7 359 aa22.76■■□□□ 1.23
LSM4-203ENST00000593829 SLC5A4Q9NY91 659 aa22.76■■□□□ 1.23
LSM4-203ENST00000593829 BIN2Q9UBW5 565 aaPredicted RBP22.76■■□□□ 1.23
LSM4-203ENST00000593829 RXRAP19793 462 aa22.75■■□□□ 1.23
LSM4-203ENST00000593829 GNAQP50148 359 aa22.75■■□□□ 1.23
LSM4-203ENST00000593829 MICU3Q86XE3 530 aa22.75■■□□□ 1.23
LSM4-203ENST00000593829 FANCBQ8NB91 859 aa22.75■■□□□ 1.23
LSM4-203ENST00000593829 BRF1Q92994 677 aa22.75■■□□□ 1.23
LSM4-203ENST00000593829 LZTS2Q9BRK4 669 aa22.75■■□□□ 1.23
LSM4-203ENST00000593829 UPF3BQ9BZI7 483 aaKnown RBP22.75■■□□□ 1.23
LSM4-203ENST00000593829 KLF18A0A0U1RQI7 1052 aa22.74■■□□□ 1.23
LSM4-203ENST00000593829 RAB11FIP4Q86YS3 637 aa22.74■■□□□ 1.23
LSM4-203ENST00000593829 CCDC144CPQ8IYA2 1237 aa22.74■■□□□ 1.23
LSM4-203ENST00000593829 SNX21Q969T3 373 aa22.74■■□□□ 1.23
LSM4-203ENST00000593829 AGXT2Q9BYV1 514 aa22.74■■□□□ 1.23
LSM4-203ENST00000593829 RIOX1Q9H6W3 641 aa22.74■■□□□ 1.23
LSM4-203ENST00000593829 ZNF236Q9UL36 1845 aa22.74■■□□□ 1.23
LSM4-203ENST00000593829 ZBTB43O43298 467 aa22.74■■□□□ 1.23
LSM4-203ENST00000593829 COBLO75128 1261 aa22.74■■□□□ 1.23
LSM4-203ENST00000593829 RBM25P49756 843 aaKnown RBP22.74■■□□□ 1.23
LSM4-203ENST00000593829 ANKRD35Q8N283 1001 aa22.74■■□□□ 1.23
LSM4-203ENST00000593829 IL17RAQ96F46 866 aa22.74■■□□□ 1.23
LSM4-203ENST00000593829 DDX11Q96FC9 970 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms