RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 ANO1Q5XXA6 986 aa17.94■□□□□ 0.46
TRIM28-203ENST00000593582 TTBK2Q6IQ55 1244 aa17.94■□□□□ 0.46
TRIM28-203ENST00000593582 CCDC174Q6PII3 467 aa17.94■□□□□ 0.46
TRIM28-203ENST00000593582 BTNL9Q6UXG8 535 aa17.94■□□□□ 0.46
TRIM28-203ENST00000593582 TRERF1Q96PN7 1200 aa17.94■□□□□ 0.46
TRIM28-203ENST00000593582 GPCPD1Q9NPB8 672 aa17.94■□□□□ 0.46
TRIM28-203ENST00000593582 RNF146Q9NTX7 359 aa17.94■□□□□ 0.46
TRIM28-203ENST00000593582 PFASO15067 1338 aa17.94■□□□□ 0.46
TRIM28-203ENST00000593582 SYNGAP1Q96PV0 1343 aa17.94■□□□□ 0.46
TRIM28-203ENST00000593582 CEP290O15078 2479 aa17.93■□□□□ 0.46
TRIM28-203ENST00000593582 ICAM1P05362 532 aa17.93■□□□□ 0.46
TRIM28-203ENST00000593582 ALAS1P13196 640 aa17.93■□□□□ 0.46
TRIM28-203ENST00000593582 SLC16A2P36021 539 aa17.93■□□□□ 0.46
TRIM28-203ENST00000593582 SYDE2Q5VT97 1194 aa17.93■□□□□ 0.46
TRIM28-203ENST00000593582 MAMDC4Q6UXC1 1216 aa17.93■□□□□ 0.46
TRIM28-203ENST00000593582 ZNF467Q7Z7K2 595 aaPredicted RBP17.93■□□□□ 0.46
TRIM28-203ENST00000593582 C7orf61Q8IZ16 206 aa17.93■□□□□ 0.46
TRIM28-203ENST00000593582 ZSCAN10Q96SZ4 725 aaPredicted RBP17.93■□□□□ 0.46
TRIM28-203ENST00000593582 CCPG1Q9ULG6 757 aa17.93■□□□□ 0.46
TRIM28-203ENST00000593582 COLQQ9Y215 455 aaPredicted RBP17.93■□□□□ 0.46
TRIM28-203ENST00000593582 RANBP2P49792 3224 aaKnown RBP17.93■□□□□ 0.46
TRIM28-203ENST00000593582 KBTBD13C9JR72 458 aa17.92■□□□□ 0.46
TRIM28-203ENST00000593582 SNHG28P0DPA3 235 aa17.92■□□□□ 0.46
TRIM28-203ENST00000593582 RARBP10826 455 aa17.92■□□□□ 0.46
TRIM28-203ENST00000593582 ZNF543Q08ER8 600 aa17.92■□□□□ 0.46
TRIM28-203ENST00000593582 HABP4Q5JVS0 413 aaKnown RBP17.92■□□□□ 0.46
TRIM28-203ENST00000593582 CENPQQ7L2Z9 268 aaPredicted RBP17.92■□□□□ 0.46
TRIM28-203ENST00000593582 UBAC1Q9BSL1 405 aa17.92■□□□□ 0.46
TRIM28-203ENST00000593582 SENP6Q9GZR1 1112 aaPredicted RBP17.92■□□□□ 0.46
TRIM28-203ENST00000593582 RANBP17Q9H2T7 1088 aaKnown RBP17.92■□□□□ 0.46
TRIM28-203ENST00000593582 KAT14Q9H8E8 782 aa17.92■□□□□ 0.46
TRIM28-203ENST00000593582 ZSWIM5Q9P217 1185 aa17.92■□□□□ 0.46
TRIM28-203ENST00000593582 U3KPZ7 1027 aaPredicted RBP17.92■□□□□ 0.46
TRIM28-203ENST00000593582 LAMA4Q16363 1823 aa17.92■□□□□ 0.46
TRIM28-203ENST00000593582 ZNFX1Q9P2E3 1918 aaKnown RBP17.92■□□□□ 0.46
TRIM28-203ENST00000593582 POTEB2H3BUK9 544 aa17.91■□□□□ 0.46
TRIM28-203ENST00000593582 SGSM2O43147 1006 aa17.91■□□□□ 0.46
TRIM28-203ENST00000593582 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
TRIM28-203ENST00000593582 TAL1P17542 331 aaPredicted RBP17.91■□□□□ 0.46
TRIM28-203ENST00000593582 TRDNQ13061 729 aa17.91■□□□□ 0.46
TRIM28-203ENST00000593582 GPATCH4Q5T3I0 446 aaKnown RBP17.91■□□□□ 0.46
TRIM28-203ENST00000593582 GJC2Q5T442 439 aaPredicted RBP17.91■□□□□ 0.46
TRIM28-203ENST00000593582 CHRDL2Q6WN34 429 aa17.91■□□□□ 0.46
TRIM28-203ENST00000593582 PNMA1Q8ND90 353 aa17.91■□□□□ 0.46
TRIM28-203ENST00000593582 ANKS1AQ92625 1134 aa17.91■□□□□ 0.46
TRIM28-203ENST00000593582 A1CFQ9NQ94 594 aaKnown RBP17.91■□□□□ 0.46
TRIM28-203ENST00000593582 SNAI1O95863 264 aaPredicted RBP17.9■□□□□ 0.46
TRIM28-203ENST00000593582 ZNF865P0CJ78 1059 aaPredicted RBP17.9■□□□□ 0.46
TRIM28-203ENST00000593582 AKR1A1P14550 325 aa17.9■□□□□ 0.46
TRIM28-203ENST00000593582 PTH1RQ03431 593 aa17.9■□□□□ 0.46
TRIM28-203ENST00000593582 ENAHQ8N8S7 591 aaPredicted RBP17.9■□□□□ 0.46
TRIM28-203ENST00000593582 XPNPEP3Q9NQH7 507 aa17.9■□□□□ 0.46
TRIM28-203ENST00000593582 ZHX1Q9UKY1 873 aaPredicted RBP17.9■□□□□ 0.46
TRIM28-203ENST00000593582 PNMA2Q9UL42 364 aa17.9■□□□□ 0.46
TRIM28-203ENST00000593582 TNKSO95271 1327 aa17.9■□□□□ 0.46
TRIM28-203ENST00000593582 PLXNA1Q9UIW2 1896 aa17.89■□□□□ 0.45
TRIM28-203ENST00000593582 CNTN2Q02246 1040 aa17.89■□□□□ 0.45
TRIM28-203ENST00000593582 LRRC26Q2I0M4 334 aa17.89■□□□□ 0.45
TRIM28-203ENST00000593582 FAM133AQ8N9E0 248 aa17.89■□□□□ 0.45
TRIM28-203ENST00000593582 ABHD16BQ9H3Z7 469 aa17.89■□□□□ 0.45
TRIM28-203ENST00000593582 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.89■□□□□ 0.45
TRIM28-203ENST00000593582 FAM184BQ9ULE4 1060 aa17.89■□□□□ 0.45
TRIM28-203ENST00000593582 FRMPD3Q5JV73 1810 aa17.88■□□□□ 0.45
TRIM28-203ENST00000593582 CYP21A2P08686 494 aa17.88■□□□□ 0.45
TRIM28-203ENST00000593582 ACVR2BQ13705 512 aa17.88■□□□□ 0.45
TRIM28-203ENST00000593582 LRRC41Q15345 812 aa17.88■□□□□ 0.45
TRIM28-203ENST00000593582 MUM1L1Q5H9M0 696 aa17.88■□□□□ 0.45
TRIM28-203ENST00000593582 IFIT1BQ5T764 474 aaKnown RBP17.88■□□□□ 0.45
TRIM28-203ENST00000593582 NSMFQ6X4W1 530 aa17.88■□□□□ 0.45
TRIM28-203ENST00000593582 KIAA1211Q6ZU35 1233 aa17.88■□□□□ 0.45
TRIM28-203ENST00000593582 ARMCX2Q7L311 632 aa17.88■□□□□ 0.45
TRIM28-203ENST00000593582 RNF180Q86T96 592 aa17.88■□□□□ 0.45
TRIM28-203ENST00000593582 CCDC144CPQ8IYA2 1237 aa17.88■□□□□ 0.45
TRIM28-203ENST00000593582 FGD4Q96M96 766 aa17.88■□□□□ 0.45
TRIM28-203ENST00000593582 CYP39A1Q9NYL5 469 aa17.88■□□□□ 0.45
TRIM28-203ENST00000593582 ASB14A6NK59 587 aa17.87■□□□□ 0.45
TRIM28-203ENST00000593582 GOLGA8HP0CJ92 632 aa17.87■□□□□ 0.45
TRIM28-203ENST00000593582 ATN1P54259 1190 aaPredicted RBP17.87■□□□□ 0.45
TRIM28-203ENST00000593582 ASPRV1Q53RT3 343 aa17.87■□□□□ 0.45
TRIM28-203ENST00000593582 RALYLQ86SE5 291 aaKnown RBP17.87■□□□□ 0.45
TRIM28-203ENST00000593582 MAP4K1Q92918 833 aa17.87■□□□□ 0.45
TRIM28-203ENST00000593582 ZMYND8Q9ULU4 1186 aaPredicted RBP17.87■□□□□ 0.45
TRIM28-203ENST00000593582 PGK1P00558 417 aa17.86■□□□□ 0.45
TRIM28-203ENST00000593582 PARP1P09874 1014 aaKnown RBP17.86■□□□□ 0.45
TRIM28-203ENST00000593582 UBA5Q9GZZ9 404 aa17.86■□□□□ 0.45
TRIM28-203ENST00000593582 RBM27Q9P2N5 1060 aaKnown RBP17.86■□□□□ 0.45
TRIM28-203ENST00000593582 SOWAHBA6NEL2 793 aa17.85■□□□□ 0.45
TRIM28-203ENST00000593582 E7EWF7 191 aa17.85■□□□□ 0.45
TRIM28-203ENST00000593582 NFIBO00712 420 aa17.85■□□□□ 0.45
TRIM28-203ENST00000593582 DUSP11O75319 330 aaKnown RBP17.85■□□□□ 0.45
TRIM28-203ENST00000593582 SLC34A2O95436 690 aa17.85■□□□□ 0.45
TRIM28-203ENST00000593582 SYN1P17600 705 aa17.85■□□□□ 0.45
TRIM28-203ENST00000593582 ADCYAP1R1P41586 468 aa17.85■□□□□ 0.45
TRIM28-203ENST00000593582 CCDC144BQ3MJ40 725 aa17.85■□□□□ 0.45
TRIM28-203ENST00000593582 BMP2KLQ5H9B9 411 aa17.85■□□□□ 0.45
TRIM28-203ENST00000593582 CYB5R4Q7L1T6 521 aa17.85■□□□□ 0.45
TRIM28-203ENST00000593582 WDR19Q8NEZ3 1342 aa17.85■□□□□ 0.45
TRIM28-203ENST00000593582 NCOA7Q8NI08 942 aa17.85■□□□□ 0.45
TRIM28-203ENST00000593582 LENG1Q96BZ8 264 aaPredicted RBP17.85■□□□□ 0.45
TRIM28-203ENST00000593582 ALPK3Q96L96 1907 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms