RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 SYDE2Q5VT97 1194 aa17.86■□□□□ 0.45
ERCC1-213ENST00000592023 CENPQQ7L2Z9 268 aaPredicted RBP17.86■□□□□ 0.45
ERCC1-213ENST00000592023 TTC14Q96N46 770 aa17.86■□□□□ 0.45
ERCC1-213ENST00000592023 ACAD9Q9H845 621 aa17.86■□□□□ 0.45
ERCC1-213ENST00000592023 SGSM2O43147 1006 aa17.85■□□□□ 0.45
ERCC1-213ENST00000592023 TNKSO95271 1327 aa17.85■□□□□ 0.45
ERCC1-213ENST00000592023 NT5C2P49902 561 aa17.85■□□□□ 0.45
ERCC1-213ENST00000592023 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.85■□□□□ 0.45
ERCC1-213ENST00000592023 C7orf61Q8IZ16 206 aa17.85■□□□□ 0.45
ERCC1-213ENST00000592023 KRT23Q9C075 422 aa17.85■□□□□ 0.45
ERCC1-213ENST00000592023 RANBP17Q9H2T7 1088 aaKnown RBP17.85■□□□□ 0.45
ERCC1-213ENST00000592023 CCPG1Q9ULG6 757 aa17.85■□□□□ 0.45
ERCC1-213ENST00000592023 MYCNP04198 464 aaPredicted RBP17.84■□□□□ 0.45
ERCC1-213ENST00000592023 COL6A1P12109 1028 aa17.84■□□□□ 0.45
ERCC1-213ENST00000592023 ZNF543Q08ER8 600 aa17.84■□□□□ 0.45
ERCC1-213ENST00000592023 TKFCQ3LXA3 575 aa17.84■□□□□ 0.45
ERCC1-213ENST00000592023 BTNL9Q6UXG8 535 aa17.84■□□□□ 0.45
ERCC1-213ENST00000592023 DGKHQ86XP1 1220 aa17.84■□□□□ 0.45
ERCC1-213ENST00000592023 TRERF1Q96PN7 1200 aa17.84■□□□□ 0.45
ERCC1-213ENST00000592023 ZSCAN10Q96SZ4 725 aaPredicted RBP17.84■□□□□ 0.45
ERCC1-213ENST00000592023 KAT14Q9H8E8 782 aa17.84■□□□□ 0.45
ERCC1-213ENST00000592023 CNNM2Q9H8M5 875 aa17.84■□□□□ 0.45
ERCC1-213ENST00000592023 A1CFQ9NQ94 594 aaKnown RBP17.84■□□□□ 0.45
ERCC1-213ENST00000592023 CNPY2Q9Y2B0 182 aa17.84■□□□□ 0.45
ERCC1-213ENST00000592023 LRRC37A2A6NM11 1700 aa17.84■□□□□ 0.45
ERCC1-213ENST00000592023 SYNGAP1Q96PV0 1343 aa17.83■□□□□ 0.44
ERCC1-213ENST00000592023 DNM1LO00429 736 aa17.83■□□□□ 0.44
ERCC1-213ENST00000592023 GOLGA8HP0CJ92 632 aa17.83■□□□□ 0.44
ERCC1-213ENST00000592023 SNHG28P0DPA3 235 aa17.83■□□□□ 0.44
ERCC1-213ENST00000592023 CCDC178Q5BJE1 867 aa17.83■□□□□ 0.44
ERCC1-213ENST00000592023 MUM1L1Q5H9M0 696 aa17.83■□□□□ 0.44
ERCC1-213ENST00000592023 GJC2Q5T442 439 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-213ENST00000592023 CHRDL2Q6WN34 429 aa17.83■□□□□ 0.44
ERCC1-213ENST00000592023 ENAHQ8N8S7 591 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-213ENST00000592023 PNMA1Q8ND90 353 aa17.83■□□□□ 0.44
ERCC1-213ENST00000592023 LENG1Q96BZ8 264 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-213ENST00000592023 FGD4Q96M96 766 aa17.83■□□□□ 0.44
ERCC1-213ENST00000592023 UBAC1Q9BSL1 405 aa17.83■□□□□ 0.44
ERCC1-213ENST00000592023 ZSWIM5Q9P217 1185 aa17.83■□□□□ 0.44
ERCC1-213ENST00000592023 NRBP1Q9UHY1 535 aa17.83■□□□□ 0.44
ERCC1-213ENST00000592023 ZHX1Q9UKY1 873 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-213ENST00000592023 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-213ENST00000592023 MCM3APO60318 1980 aa17.82■□□□□ 0.44
ERCC1-213ENST00000592023 POTEB2H3BUK9 544 aa17.82■□□□□ 0.44
ERCC1-213ENST00000592023 ICAM1P05362 532 aa17.82■□□□□ 0.44
ERCC1-213ENST00000592023 CYP21A2P08686 494 aa17.82■□□□□ 0.44
ERCC1-213ENST00000592023 CNTN2Q02246 1040 aa17.82■□□□□ 0.44
ERCC1-213ENST00000592023 MSL3Q8N5Y2 521 aaKnown RBP17.82■□□□□ 0.44
ERCC1-213ENST00000592023 SENP6Q9GZR1 1112 aaPredicted RBP17.82■□□□□ 0.44
ERCC1-213ENST00000592023 COLQQ9Y215 455 aaPredicted RBP17.82■□□□□ 0.44
ERCC1-213ENST00000592023 LCTP09848 1927 aa17.82■□□□□ 0.44
ERCC1-213ENST00000592023 KBTBD13C9JR72 458 aa17.81■□□□□ 0.44
ERCC1-213ENST00000592023 SNAI1O95863 264 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-213ENST00000592023 ZNF865P0CJ78 1059 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-213ENST00000592023 RARBP10826 455 aa17.81■□□□□ 0.44
ERCC1-213ENST00000592023 AKR1A1P14550 325 aa17.81■□□□□ 0.44
ERCC1-213ENST00000592023 LRRC26Q2I0M4 334 aa17.81■□□□□ 0.44
ERCC1-213ENST00000592023 GPATCH4Q5T3I0 446 aaKnown RBP17.81■□□□□ 0.44
ERCC1-213ENST00000592023 MAMDC4Q6UXC1 1216 aa17.81■□□□□ 0.44
ERCC1-213ENST00000592023 NSMFQ6X4W1 530 aa17.81■□□□□ 0.44
ERCC1-213ENST00000592023 CYB5R4Q7L1T6 521 aa17.81■□□□□ 0.44
ERCC1-213ENST00000592023 ZNF467Q7Z7K2 595 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-213ENST00000592023 ARRDC4Q8NCT1 418 aa17.81■□□□□ 0.44
ERCC1-213ENST00000592023 CPVLQ9H3G5 476 aa17.81■□□□□ 0.44
ERCC1-213ENST00000592023 XPNPEP3Q9NQH7 507 aa17.81■□□□□ 0.44
ERCC1-213ENST00000592023 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-213ENST00000592023 ZMYND8Q9ULU4 1186 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-213ENST00000592023 TAF6LQ9Y6J9 622 aa17.81■□□□□ 0.44
ERCC1-213ENST00000592023 TRDNQ13061 729 aa17.8■□□□□ 0.44
ERCC1-213ENST00000592023 HABP4Q5JVS0 413 aaKnown RBP17.8■□□□□ 0.44
ERCC1-213ENST00000592023 IFIT1BQ5T764 474 aaKnown RBP17.8■□□□□ 0.44
ERCC1-213ENST00000592023 ARMCX2Q7L311 632 aa17.8■□□□□ 0.44
ERCC1-213ENST00000592023 FAM133AQ8N9E0 248 aa17.8■□□□□ 0.44
ERCC1-213ENST00000592023 ANKS1AQ92625 1134 aa17.8■□□□□ 0.44
ERCC1-213ENST00000592023 SMCHD1A6NHR9 2005 aa17.79■□□□□ 0.44
ERCC1-213ENST00000592023 SYN1P17600 705 aa17.79■□□□□ 0.44
ERCC1-213ENST00000592023 ATN1P54259 1190 aaPredicted RBP17.79■□□□□ 0.44
ERCC1-213ENST00000592023 LRRC41Q15345 812 aa17.79■□□□□ 0.44
ERCC1-213ENST00000592023 RALYLQ86SE5 291 aaKnown RBP17.79■□□□□ 0.44
ERCC1-213ENST00000592023 UBA5Q9GZZ9 404 aa17.79■□□□□ 0.44
ERCC1-213ENST00000592023 CYP39A1Q9NYL5 469 aa17.79■□□□□ 0.44
ERCC1-213ENST00000592023 RBM8AQ9Y5S9 174 aaKnown RBP17.79■□□□□ 0.44
ERCC1-213ENST00000592023 SOWAHBA6NEL2 793 aa17.78■□□□□ 0.44
ERCC1-213ENST00000592023 NFIBO00712 420 aa17.78■□□□□ 0.44
ERCC1-213ENST00000592023 PGK1P00558 417 aa17.78■□□□□ 0.44
ERCC1-213ENST00000592023 SEC23AQ15436 765 aa17.78■□□□□ 0.44
ERCC1-213ENST00000592023 ASPRV1Q53RT3 343 aa17.78■□□□□ 0.44
ERCC1-213ENST00000592023 BMP2KLQ5H9B9 411 aa17.78■□□□□ 0.44
ERCC1-213ENST00000592023 STOX1Q6ZVD7 989 aa17.78■□□□□ 0.44
ERCC1-213ENST00000592023 CCDC144CPQ8IYA2 1237 aa17.78■□□□□ 0.44
ERCC1-213ENST00000592023 ESYT1Q9BSJ8 1104 aa17.78■□□□□ 0.44
ERCC1-213ENST00000592023 PCDH10Q9P2E7 1040 aa17.78■□□□□ 0.44
ERCC1-213ENST00000592023 DDX49Q9Y6V7 483 aaKnown RBP17.78■□□□□ 0.44
ERCC1-213ENST00000592023 ASTN1O14525 1302 aa17.77■□□□□ 0.44
ERCC1-213ENST00000592023 WDR19Q8NEZ3 1342 aa17.77■□□□□ 0.44
ERCC1-213ENST00000592023 SYNRGQ9UMZ2 1314 aa17.77■□□□□ 0.44
ERCC1-213ENST00000592023 E7EWF7 191 aa17.77■□□□□ 0.44
ERCC1-213ENST00000592023 DHX16O60231 1041 aaKnown RBP17.77■□□□□ 0.44
ERCC1-213ENST00000592023 PARP1P09874 1014 aaKnown RBP17.77■□□□□ 0.44
ERCC1-213ENST00000592023 ACVR2BQ13705 512 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms