RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 TNKSO95271 1327 aa31.98■■■□□ 2.71
SMAD4-213ENST00000591914 MSCO60682 206 aa31.97■■■□□ 2.71
SMAD4-213ENST00000591914 SNAP25P60880 206 aa31.97■■■□□ 2.71
SMAD4-213ENST00000591914 TKFCQ3LXA3 575 aa31.97■■■□□ 2.71
SMAD4-213ENST00000591914 SYDE2Q5VT97 1194 aa31.97■■■□□ 2.71
SMAD4-213ENST00000591914 PNMA1Q8ND90 353 aa31.97■■■□□ 2.71
SMAD4-213ENST00000591914 RANBP17Q9H2T7 1088 aaKnown RBP31.97■■■□□ 2.71
SMAD4-213ENST00000591914 CNGA1P29973 690 aa31.96■■■□□ 2.71
SMAD4-213ENST00000591914 CCDC174Q6PII3 467 aa31.96■■■□□ 2.71
SMAD4-213ENST00000591914 NECAB2Q7Z6G3 386 aa31.96■■■□□ 2.71
SMAD4-213ENST00000591914 TINF2Q9BSI4 451 aa31.96■■■□□ 2.71
SMAD4-213ENST00000591914 ESYT1Q9BSJ8 1104 aa31.96■■■□□ 2.71
SMAD4-213ENST00000591914 UBAC1Q9BSL1 405 aa31.96■■■□□ 2.71
SMAD4-213ENST00000591914 ACAD9Q9H845 621 aa31.96■■■□□ 2.71
SMAD4-213ENST00000591914 KAT14Q9H8E8 782 aa31.96■■■□□ 2.71
SMAD4-213ENST00000591914 HOMER2Q9NSB8 354 aa31.96■■■□□ 2.71
SMAD4-213ENST00000591914 ANKRD35Q8N283 1001 aa31.95■■■□□ 2.71
SMAD4-213ENST00000591914 RNF146Q9NTX7 359 aa31.95■■■□□ 2.71
SMAD4-213ENST00000591914 NRBP1Q9UHY1 535 aa31.95■■■□□ 2.71
SMAD4-213ENST00000591914 TAF6LQ9Y6J9 622 aa31.95■■■□□ 2.71
SMAD4-213ENST00000591914 ICAM1P05362 532 aa31.94■■■□□ 2.7
SMAD4-213ENST00000591914 TRDNQ13061 729 aa31.94■■■□□ 2.7
SMAD4-213ENST00000591914 PRAMEF19Q5SWL8 479 aa31.94■■■□□ 2.7
SMAD4-213ENST00000591914 GPATCH4Q5T3I0 446 aaKnown RBP31.94■■■□□ 2.7
SMAD4-213ENST00000591914 CYB5R4Q7L1T6 521 aa31.94■■■□□ 2.7
SMAD4-213ENST00000591914 MSL3Q8N5Y2 521 aaKnown RBP31.94■■■□□ 2.7
SMAD4-213ENST00000591914 RBM8AQ9Y5S9 174 aaKnown RBP31.94■■■□□ 2.7
SMAD4-213ENST00000591914 SEPT4O43236 478 aa31.93■■■□□ 2.7
SMAD4-213ENST00000591914 NEFLP07196 543 aa31.93■■■□□ 2.7
SMAD4-213ENST00000591914 KIAA1211Q6ZU35 1233 aa31.93■■■□□ 2.7
SMAD4-213ENST00000591914 ZNF467Q7Z7K2 595 aaPredicted RBP31.93■■■□□ 2.7
SMAD4-213ENST00000591914 TRERF1Q96PN7 1200 aa31.93■■■□□ 2.7
SMAD4-213ENST00000591914 LSG1Q9H089 658 aaKnown RBP31.93■■■□□ 2.7
SMAD4-213ENST00000591914 E7EWF7 191 aa31.92■■■□□ 2.7
SMAD4-213ENST00000591914 ALAS1P13196 640 aa31.92■■■□□ 2.7
SMAD4-213ENST00000591914 SEC23AQ15436 765 aa31.92■■■□□ 2.7
SMAD4-213ENST00000591914 MAMDC4Q6UXC1 1216 aa31.92■■■□□ 2.7
SMAD4-213ENST00000591914 DPF3Q92784 378 aa31.92■■■□□ 2.7
SMAD4-213ENST00000591914 CCPG1Q9ULG6 757 aa31.92■■■□□ 2.7
SMAD4-213ENST00000591914 STOX1Q6ZVD7 989 aa31.91■■■□□ 2.7
SMAD4-213ENST00000591914 FGD4Q96M96 766 aa31.91■■■□□ 2.7
SMAD4-213ENST00000591914 A1CFQ9NQ94 594 aaKnown RBP31.91■■■□□ 2.7
SMAD4-213ENST00000591914 SYNGAP1Q96PV0 1343 aa31.91■■■□□ 2.7
SMAD4-213ENST00000591914 GOLGA8HP0CJ92 632 aa31.9■■■□□ 2.7
SMAD4-213ENST00000591914 IFIT1BQ5T764 474 aaKnown RBP31.9■■■□□ 2.7
SMAD4-213ENST00000591914 C11orf49Q9H6J7 331 aa31.9■■■□□ 2.7
SMAD4-213ENST00000591914 COL6A1P12109 1028 aa31.89■■■□□ 2.7
SMAD4-213ENST00000591914 MUM1L1Q5H9M0 696 aa31.89■■■□□ 2.7
SMAD4-213ENST00000591914 RALYLQ86SE5 291 aaKnown RBP31.89■■■□□ 2.7
SMAD4-213ENST00000591914 NCOA7Q8NI08 942 aa31.89■■■□□ 2.7
SMAD4-213ENST00000591914 SMCHD1A6NHR9 2005 aa31.88■■■□□ 2.69
SMAD4-213ENST00000591914 ASPRV1Q53RT3 343 aa31.88■■■□□ 2.69
SMAD4-213ENST00000591914 FAM133AQ8N9E0 248 aa31.88■■■□□ 2.69
SMAD4-213ENST00000591914 PFASO15067 1338 aa31.88■■■□□ 2.69
SMAD4-213ENST00000591914 ZNF865P0CJ78 1059 aaPredicted RBP31.87■■■□□ 2.69
SMAD4-213ENST00000591914 TAL1P17542 331 aaPredicted RBP31.87■■■□□ 2.69
SMAD4-213ENST00000591914 CNTN2Q02246 1040 aa31.87■■■□□ 2.69
SMAD4-213ENST00000591914 PNMA2Q9UL42 364 aa31.87■■■□□ 2.69
SMAD4-213ENST00000591914 CNPY2Q9Y2B0 182 aa31.87■■■□□ 2.69
SMAD4-213ENST00000591914 ALPK3Q96L96 1907 aa31.87■■■□□ 2.69
SMAD4-213ENST00000591914 WDR19Q8NEZ3 1342 aa31.86■■■□□ 2.69
SMAD4-213ENST00000591914 POTEB2H3BUK9 544 aa31.86■■■□□ 2.69
SMAD4-213ENST00000591914 SNAI1O95863 264 aaPredicted RBP31.86■■■□□ 2.69
SMAD4-213ENST00000591914 CYP39A1Q9NYL5 469 aa31.86■■■□□ 2.69
SMAD4-213ENST00000591914 H0YGN5 161 aa31.85■■■□□ 2.69
SMAD4-213ENST00000591914 ANO1Q5XXA6 986 aa31.85■■■□□ 2.69
SMAD4-213ENST00000591914 UBA5Q9GZZ9 404 aa31.85■■■□□ 2.69
SMAD4-213ENST00000591914 CPVLQ9H3G5 476 aa31.85■■■□□ 2.69
SMAD4-213ENST00000591914 ANO2Q9NQ90 1003 aa31.85■■■□□ 2.69
SMAD4-213ENST00000591914 CEP290O15078 2479 aa31.85■■■□□ 2.69
SMAD4-213ENST00000591914 PARP1P09874 1014 aaKnown RBP31.84■■■□□ 2.69
SMAD4-213ENST00000591914 MB21D2Q8IYB1 491 aaPredicted RBP31.84■■■□□ 2.69
SMAD4-213ENST00000591914 DNM1LO00429 736 aa31.83■■■□□ 2.69
SMAD4-213ENST00000591914 IFIT3O14879 490 aaKnown RBP31.83■■■□□ 2.69
SMAD4-213ENST00000591914 EVI5O60447 810 aa31.83■■■□□ 2.69
SMAD4-213ENST00000591914 CDC45O75419 566 aa31.83■■■□□ 2.69
SMAD4-213ENST00000591914 NECTIN1Q15223 517 aa31.83■■■□□ 2.69
SMAD4-213ENST00000591914 ARRDC4Q8NCT1 418 aa31.83■■■□□ 2.69
SMAD4-213ENST00000591914 CDKN2AIPQ9NXV6 580 aaPredicted RBP31.83■■■□□ 2.69
SMAD4-213ENST00000591914 NR2E3Q9Y5X4 410 aa31.83■■■□□ 2.69
SMAD4-213ENST00000591914 MCM3APO60318 1980 aa31.82■■■□□ 2.68
SMAD4-213ENST00000591914 SOWAHBA6NEL2 793 aa31.82■■■□□ 2.68
SMAD4-213ENST00000591914 SLC27A2O14975 620 aa31.82■■■□□ 2.68
SMAD4-213ENST00000591914 ANTXR2P58335 489 aa31.82■■■□□ 2.68
SMAD4-213ENST00000591914 SART3Q15020 963 aaKnown RBP31.82■■■□□ 2.68
SMAD4-213ENST00000591914 CASC1Q6TDU7 716 aa31.82■■■□□ 2.68
SMAD4-213ENST00000591914 ADGRF4Q8IZF3 695 aa31.82■■■□□ 2.68
SMAD4-213ENST00000591914 LCTP09848 1927 aa31.81■■■□□ 2.68
SMAD4-213ENST00000591914 ERICH2A1L162 156 aa31.81■■■□□ 2.68
SMAD4-213ENST00000591914 NFIBO00712 420 aa31.81■■■□□ 2.68
SMAD4-213ENST00000591914 AKR1A1P14550 325 aa31.81■■■□□ 2.68
SMAD4-213ENST00000591914 NSMFQ6X4W1 530 aa31.81■■■□□ 2.68
SMAD4-213ENST00000591914 ARMCX2Q7L311 632 aa31.81■■■□□ 2.68
SMAD4-213ENST00000591914 CHST3Q7LGC8 479 aa31.81■■■□□ 2.68
SMAD4-213ENST00000591914 CCDC144CPQ8IYA2 1237 aa31.81■■■□□ 2.68
SMAD4-213ENST00000591914 CLEC4DQ8WXI8 215 aa31.81■■■□□ 2.68
SMAD4-213ENST00000591914 ASTN1O14525 1302 aa31.8■■■□□ 2.68
SMAD4-213ENST00000591914 RARBP10826 455 aa31.8■■■□□ 2.68
SMAD4-213ENST00000591914 CREB3L3Q68CJ9 461 aa31.8■■■□□ 2.68
SMAD4-213ENST00000591914 ABHD16BQ9H3Z7 469 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms