RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 ABHD16BQ9H3Z7 469 aa12.26□□□□□ -0.45
SDF2-209ENST00000591903 ZNF214Q9UL59 606 aaPredicted RBP12.26□□□□□ -0.45
SDF2-209ENST00000591903 EXOC6BQ9Y2D4 811 aa12.26□□□□□ -0.45
SDF2-209ENST00000591903 PI4K2BG5E9Z4 385 aa12.25□□□□□ -0.45
SDF2-209ENST00000591903 SNAI1O95863 264 aaPredicted RBP12.25□□□□□ -0.45
SDF2-209ENST00000591903 RABGGTBP53611 331 aa12.25□□□□□ -0.45
SDF2-209ENST00000591903 NKX3-2P78367 333 aa12.25□□□□□ -0.45
SDF2-209ENST00000591903 ACVR2BQ13705 512 aa12.25□□□□□ -0.45
SDF2-209ENST00000591903 TMEM67Q5HYA8 995 aa12.25□□□□□ -0.45
SDF2-209ENST00000591903 DDX11Q96FC9 970 aa12.25□□□□□ -0.45
SDF2-209ENST00000591903 CCDC17Q96LX7 622 aa12.25□□□□□ -0.45
SDF2-209ENST00000591903 RIOK1Q9BRS2 568 aaKnown RBP12.25□□□□□ -0.45
SDF2-209ENST00000591903 C11orf16Q9NQ32 467 aa12.25□□□□□ -0.45
SDF2-209ENST00000591903 MCM9Q9NXL9 1143 aa12.25□□□□□ -0.45
SDF2-209ENST00000591903 PPP1R9AQ9ULJ8 1098 aa12.25□□□□□ -0.45
SDF2-209ENST00000591903 DNAJC25-GNG10A0A024R161 153 aa12.24□□□□□ -0.45
SDF2-209ENST00000591903 MAGEB6P1A0A0J9YX57 407 aa12.24□□□□□ -0.45
SDF2-209ENST00000591903 PRR33A8MZF0 331 aa12.24□□□□□ -0.45
SDF2-209ENST00000591903 IGHDP01880 384 aa12.24□□□□□ -0.45
SDF2-209ENST00000591903 ATP2A2P16615 1042 aaKnown RBP12.24□□□□□ -0.45
SDF2-209ENST00000591903 SLC43A3Q8NBI5 491 aa12.24□□□□□ -0.45
SDF2-209ENST00000591903 CCDC136Q96JN2 1154 aa12.24□□□□□ -0.45
SDF2-209ENST00000591903 TEX13BQ9BXU2 312 aa12.24□□□□□ -0.45
SDF2-209ENST00000591903 GOPCQ9HD26 462 aa12.24□□□□□ -0.45
SDF2-209ENST00000591903 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
SDF2-209ENST00000591903 BAZ2AQ9UIF9 1905 aaKnown RBP12.23□□□□□ -0.45
SDF2-209ENST00000591903 ZBBXA8MT70 800 aa12.23□□□□□ -0.45
SDF2-209ENST00000591903 SMIM22K7EJ46 135 aa12.23□□□□□ -0.45
SDF2-209ENST00000591903 NUCB1Q02818 461 aa12.23□□□□□ -0.45
SDF2-209ENST00000591903 CCDC144BQ3MJ40 725 aa12.23□□□□□ -0.45
SDF2-209ENST00000591903 SIAH1Q8IUQ4 282 aa12.23□□□□□ -0.45
SDF2-209ENST00000591903 REPS2Q8NFH8 660 aa12.23□□□□□ -0.45
SDF2-209ENST00000591903 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.23□□□□□ -0.45
SDF2-209ENST00000591903 SNX27Q96L92 541 aa12.23□□□□□ -0.45
SDF2-209ENST00000591903 KCNH6Q9H252 994 aa12.23□□□□□ -0.45
SDF2-209ENST00000591903 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.23□□□□□ -0.45
SDF2-209ENST00000591903 FAM86C2PA6NEL3 165 aa12.22□□□□□ -0.45
SDF2-209ENST00000591903 ZEB2O60315 1214 aa12.22□□□□□ -0.45
SDF2-209ENST00000591903 MYOGP15173 224 aa12.22□□□□□ -0.45
SDF2-209ENST00000591903 MRE11P49959 708 aa12.22□□□□□ -0.45
SDF2-209ENST00000591903 CCL23P55773 120 aa12.22□□□□□ -0.45
SDF2-209ENST00000591903 ITGA7Q13683 1181 aa12.22□□□□□ -0.45
SDF2-209ENST00000591903 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.22□□□□□ -0.45
SDF2-209ENST00000591903 EAF2Q96CJ1 260 aaPredicted RBP12.22□□□□□ -0.45
SDF2-209ENST00000591903 NOC4LQ9BVI4 516 aaKnown RBP12.22□□□□□ -0.45
SDF2-209ENST00000591903 KANSL2Q9H9L4 492 aa12.22□□□□□ -0.45
SDF2-209ENST00000591903 FBXO28Q9NVF7 368 aa12.22□□□□□ -0.45
SDF2-209ENST00000591903 DBNLQ9UJU6 430 aaKnown RBP12.22□□□□□ -0.45
SDF2-209ENST00000591903 COL4A4P53420 1690 aaPredicted RBP12.22□□□□□ -0.45
SDF2-209ENST00000591903 BRWD1Q9NSI6 2320 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 UMODL1Q5DID0 1318 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 TTC41PQ6P2S7 1318 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 ATP2A1O14983 1001 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 ADCY6O43306 1168 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 CA3P07451 260 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 IFIT2P09913 472 aaKnown RBP12.21□□□□□ -0.45
SDF2-209ENST00000591903 ACTN1P12814 892 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 TTF1Q15361 905 aaPredicted RBP12.21□□□□□ -0.45
SDF2-209ENST00000591903 SNRNP48Q6IEG0 339 aaKnown RBP12.21□□□□□ -0.45
SDF2-209ENST00000591903 CHD1LQ86WJ1 897 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 TICAM2Q86XR7 235 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 PHOSPHO2Q8TCD6 241 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 GPATCH3Q96I76 525 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 SLC9A7Q96T83 725 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 WNT8AQ9H1J5 351 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 DCP1AQ9NPI6 582 aaPredicted RBP12.21□□□□□ -0.45
SDF2-209ENST00000591903 FBXO40Q9UH90 709 aa12.21□□□□□ -0.45
SDF2-209ENST00000591903 SCN5AQ14524 2016 aa12.21□□□□□ -0.46
SDF2-209ENST00000591903 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 GREB1LQ9C091 1923 aaPredicted RBP12.2□□□□□ -0.46
SDF2-209ENST00000591903 MYH4Q9Y623 1939 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 KIF28PB7ZC32 967 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 RFXAPO00287 272 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 CTAGE5O15320 804 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 EEF2P13639 858 aaKnown RBP12.2□□□□□ -0.46
SDF2-209ENST00000591903 AKR1B1P15121 316 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 IRX5P78411 483 aaPredicted RBP12.2□□□□□ -0.46
SDF2-209ENST00000591903 FAM83BQ5T0W9 1011 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 ANKRD45Q5TZF3 282 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 CXCL17Q6UXB2 119 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 ARMCX2Q7L311 632 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 AACSQ86V21 672 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 CLEC10AQ8IUN9 316 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 AMOTL1Q8IY63 956 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 KHSRPQ92945 711 aaKnown RBP eCLIP12.2□□□□□ -0.46
SDF2-209ENST00000591903 SLF1Q9BQI6 1058 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 OSBPL3Q9H4L5 887 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 LMCD1Q9NZU5 365 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 TANC1Q9C0D5 1861 aa12.2□□□□□ -0.46
SDF2-209ENST00000591903 B4GALT4O60513 344 aa12.19□□□□□ -0.46
SDF2-209ENST00000591903 SUPT20HL2P0C7V6 817 aa12.19□□□□□ -0.46
SDF2-209ENST00000591903 ALADP13716 330 aa12.19□□□□□ -0.46
SDF2-209ENST00000591903 TNFAIP2Q03169 654 aa12.19□□□□□ -0.46
SDF2-209ENST00000591903 TLK2Q86UE8 772 aa12.19□□□□□ -0.46
SDF2-209ENST00000591903 ANKRD35Q8N283 1001 aa12.19□□□□□ -0.46
SDF2-209ENST00000591903 PRPF38AQ8NAV1 312 aaKnown RBP12.19□□□□□ -0.46
SDF2-209ENST00000591903 ANTXR1Q9H6X2 564 aa12.19□□□□□ -0.46
SDF2-209ENST00000591903 IL1RAPL2Q9NP60 686 aa12.19□□□□□ -0.46
SDF2-209ENST00000591903 ATP8A2Q9NTI2 1148 aa12.19□□□□□ -0.46
SDF2-209ENST00000591903 TLR7Q9NYK1 1049 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms