RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 KCTD2Q14681 263 aa11.31□□□□□ -0.6
BRCA1-226ENST00000591534 LCORLQ8N3X6 602 aa11.31□□□□□ -0.6
BRCA1-226ENST00000591534 HLA-CQ95604 372 aa11.31□□□□□ -0.6
BRCA1-226ENST00000591534 BCL11AQ9H165 835 aa11.31□□□□□ -0.6
BRCA1-226ENST00000591534 ARMT1Q9H993 441 aa11.31□□□□□ -0.6
BRCA1-226ENST00000591534 MTMR10Q9NXD2 777 aa11.31□□□□□ -0.6
BRCA1-226ENST00000591534 ATP11BQ9Y2G3 1177 aa11.31□□□□□ -0.6
BRCA1-226ENST00000591534 DDX60LQ5H9U9 1706 aaKnown RBP11.31□□□□□ -0.6
BRCA1-226ENST00000591534 FOCADQ5VW36 1801 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 TCRBV5S4A2TA0A5A2 114 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 MBD4O95243 580 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 RARBP10826 455 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 ADD2P35612 726 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 GUCA2AQ02747 115 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 UBE3CQ15386 1083 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 GJC2Q5T442 439 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-226ENST00000591534 SLC39A5Q6ZMH5 540 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 Q7L0L9 218 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 RNF180Q86T96 592 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 SIRT2Q8IXJ6 389 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 SPICE1Q8N0Z3 855 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 HAUS7Q99871 368 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 BOLA2Q9H3K6 86 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 ZNF287Q9HBT7 754 aa11.3□□□□□ -0.6
BRCA1-226ENST00000591534 A0A0C4DFX4 3053 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 IGHA2P01877 340 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 AKR1B1P15121 316 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 CDK8P49336 464 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 ZNF697Q5TEC3 545 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 C12orf60Q5U649 245 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 C1orf53Q5VUE5 145 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 C16orf86Q6ZW13 317 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 TRPV1Q8NER1 839 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 GPATCH3Q96I76 525 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 MAML3Q96JK9 1138 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 MMP19Q99542 508 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 PRDM5Q9NQX1 630 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-226ENST00000591534 ARPP21Q9UBL0 812 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-226ENST00000591534 CNPY2Q9Y2B0 182 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 DIS3Q9Y2L1 958 aaKnown RBP11.29□□□□□ -0.6
BRCA1-226ENST00000591534 CTDP1Q9Y5B0 961 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-226ENST00000591534 SLC4A4Q9Y6R1 1079 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 PLXNB2O15031 1838 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 CDK5RAP2Q96SN8 1893 aa11.29□□□□□ -0.6
BRCA1-226ENST00000591534 COL6A3P12111 3177 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 USP17L12C9JPN9 530 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 BHMG1C9JSJ3 638 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-226ENST00000591534 USP17L21D6R901 530 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 RAD21O60216 631 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 COBLO75128 1261 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 CYP2D6P10635 497 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 EEF2P13639 858 aaKnown RBP11.28□□□□□ -0.6
BRCA1-226ENST00000591534 STAT3P40763 770 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 LRRFIP1Q32MZ4 808 aaKnown RBP11.28□□□□□ -0.6
BRCA1-226ENST00000591534 RIOX2Q8IUF8 465 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 SLC44A5Q8NCS7 719 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 ATG4CQ96DT6 458 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 DYNLL2Q96FJ2 89 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 POM121Q96HA1 1249 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 LRRCC1Q9C099 1032 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 MKNK2Q9HBH9 465 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 XPNPEP3Q9NQH7 507 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 ZBTB40Q9NUA8 1239 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 TACC3Q9Y6A5 838 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 MYH1P12882 1939 aa11.28□□□□□ -0.6
BRCA1-226ENST00000591534 PRKAB2O43741 272 aa11.27□□□□□ -0.61
BRCA1-226ENST00000591534 RNF40O75150 1001 aa11.27□□□□□ -0.61
BRCA1-226ENST00000591534 ADCYAP1R1P41586 468 aa11.27□□□□□ -0.61
BRCA1-226ENST00000591534 TMEM132BQ14DG7 1078 aa11.27□□□□□ -0.61
BRCA1-226ENST00000591534 SNX17Q15036 470 aa11.27□□□□□ -0.61
BRCA1-226ENST00000591534 LRRC41Q15345 812 aa11.27□□□□□ -0.61
BRCA1-226ENST00000591534 PPP2R2DQ66LE6 453 aa11.27□□□□□ -0.61
BRCA1-226ENST00000591534 GIMAP6Q6P9H5 292 aa11.27□□□□□ -0.61
BRCA1-226ENST00000591534 MSL3Q8N5Y2 521 aaKnown RBP11.27□□□□□ -0.61
BRCA1-226ENST00000591534 TINF2Q9BSI4 451 aa11.27□□□□□ -0.61
BRCA1-226ENST00000591534 PPP1R9AQ9ULJ8 1098 aa11.27□□□□□ -0.61
BRCA1-226ENST00000591534 ADAMTS5Q9UNA0 930 aa11.27□□□□□ -0.61
BRCA1-226ENST00000591534 VWA5AO00534 786 aa11.26□□□□□ -0.61
BRCA1-226ENST00000591534 HOXA2O43364 376 aa11.26□□□□□ -0.61
BRCA1-226ENST00000591534 AKR1A1P14550 325 aa11.26□□□□□ -0.61
BRCA1-226ENST00000591534 GNAT2P19087 354 aa11.26□□□□□ -0.61
BRCA1-226ENST00000591534 TRIM60Q495X7 471 aa11.26□□□□□ -0.61
BRCA1-226ENST00000591534 ANO1Q5XXA6 986 aa11.26□□□□□ -0.61
BRCA1-226ENST00000591534 SIAH1Q8IUQ4 282 aa11.26□□□□□ -0.61
BRCA1-226ENST00000591534 NUP133Q8WUM0 1156 aa11.26□□□□□ -0.61
BRCA1-226ENST00000591534 DDX11Q96FC9 970 aa11.26□□□□□ -0.61
BRCA1-226ENST00000591534 TEX13BQ9BXU2 312 aa11.26□□□□□ -0.61
BRCA1-226ENST00000591534 PHF24Q9UPV7 400 aa11.26□□□□□ -0.61
BRCA1-226ENST00000591534 DNAH12Q6ZR08 3092 aa11.26□□□□□ -0.61
BRCA1-226ENST00000591534 LILRB3O75022 631 aa11.25□□□□□ -0.61
BRCA1-226ENST00000591534 ZBED4O75132 1171 aa11.25□□□□□ -0.61
BRCA1-226ENST00000591534 ZFYP08048 801 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-226ENST00000591534 SMAD3P84022 425 aaKnown RBP11.25□□□□□ -0.61
BRCA1-226ENST00000591534 TUSC1Q2TAM9 212 aa11.25□□□□□ -0.61
BRCA1-226ENST00000591534 SBK1Q52WX2 424 aa11.25□□□□□ -0.61
BRCA1-226ENST00000591534 KIAA1755Q5JYT7 1200 aa11.25□□□□□ -0.61
BRCA1-226ENST00000591534 PRAMEF19Q5SWL8 479 aa11.25□□□□□ -0.61
BRCA1-226ENST00000591534 CTR9Q6PD62 1173 aa11.25□□□□□ -0.61
BRCA1-226ENST00000591534 PRPF38AQ8NAV1 312 aaKnown RBP11.25□□□□□ -0.61
BRCA1-226ENST00000591534 BADQ92934 168 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms