RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 RNF20Q5VTR2 975 aa27.23■■□□□ 1.95
LSM7-206ENST00000591515 ESR2Q92731 530 aa27.23■■□□□ 1.95
LSM7-206ENST00000591515 MAML3Q96JK9 1138 aa27.23■■□□□ 1.95
LSM7-206ENST00000591515 KRT23Q9C075 422 aa27.23■■□□□ 1.95
LSM7-206ENST00000591515 LSG1Q9H089 658 aaKnown RBP27.23■■□□□ 1.95
LSM7-206ENST00000591515 HOXC10Q9NYD6 342 aa27.23■■□□□ 1.95
LSM7-206ENST00000591515 RAPGEFL1Q9UHV5 662 aa27.23■■□□□ 1.95
LSM7-206ENST00000591515 RBM8AQ9Y5S9 174 aaKnown RBP27.23■■□□□ 1.95
LSM7-206ENST00000591515 PLIN4Q96Q06 1357 aa27.22■■□□□ 1.95
LSM7-206ENST00000591515 TANGO6Q9C0B7 1094 aa27.22■■□□□ 1.95
LSM7-206ENST00000591515 SLC5A4Q9NY91 659 aa27.22■■□□□ 1.95
LSM7-206ENST00000591515 XPNPEP3Q9NQH7 507 aa27.21■■□□□ 1.95
LSM7-206ENST00000591515 RAG1P15918 1043 aa27.2■■□□□ 1.94
LSM7-206ENST00000591515 FPGSQ05932 587 aa27.2■■□□□ 1.94
LSM7-206ENST00000591515 CCDC178Q5BJE1 867 aa27.2■■□□□ 1.94
LSM7-206ENST00000591515 KIAA1755Q5JYT7 1200 aa27.2■■□□□ 1.94
LSM7-206ENST00000591515 TBC1D10CQ8IV04 446 aa27.2■■□□□ 1.94
LSM7-206ENST00000591515 ABRAQ8N0Z2 381 aa27.2■■□□□ 1.94
LSM7-206ENST00000591515 MROH8Q9H579 483 aa27.2■■□□□ 1.94
LSM7-206ENST00000591515 NYAP2Q9P242 653 aa27.2■■□□□ 1.94
LSM7-206ENST00000591515 GBF1Q92538 1859 aa27.19■■□□□ 1.94
LSM7-206ENST00000591515 EPB41L2O43491 1005 aaKnown RBP27.19■■□□□ 1.94
LSM7-206ENST00000591515 PQBP1O60828 265 aaKnown RBP27.19■■□□□ 1.94
LSM7-206ENST00000591515 NCAPG2Q86XI2 1143 aa27.19■■□□□ 1.94
LSM7-206ENST00000591515 MB21D1Q8N884 522 aa27.19■■□□□ 1.94
LSM7-206ENST00000591515 ZNF576Q9H609 170 aa27.19■■□□□ 1.94
LSM7-206ENST00000591515 SYNPO2Q9UMS6 1093 aa27.19■■□□□ 1.94
LSM7-206ENST00000591515 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.18■■□□□ 1.94
LSM7-206ENST00000591515 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.18■■□□□ 1.94
LSM7-206ENST00000591515 A0A1W2PQ45 241 aaPredicted RBP27.18■■□□□ 1.94
LSM7-206ENST00000591515 A0A1W2PQY0 241 aa27.18■■□□□ 1.94
LSM7-206ENST00000591515 TTLL1O95922 423 aa27.18■■□□□ 1.94
LSM7-206ENST00000591515 PGK1P00558 417 aa27.18■■□□□ 1.94
LSM7-206ENST00000591515 RARBP10826 455 aa27.18■■□□□ 1.94
LSM7-206ENST00000591515 DSG3P32926 999 aa27.18■■□□□ 1.94
LSM7-206ENST00000591515 PLS1Q14651 629 aa27.18■■□□□ 1.94
LSM7-206ENST00000591515 RALYLQ86SE5 291 aaKnown RBP27.18■■□□□ 1.94
LSM7-206ENST00000591515 GOPCQ9HD26 462 aa27.18■■□□□ 1.94
LSM7-206ENST00000591515 TMX2Q9Y320 296 aa27.18■■□□□ 1.94
LSM7-206ENST00000591515 CYP21A2P08686 494 aa27.17■■□□□ 1.94
LSM7-206ENST00000591515 EEF2P13639 858 aaKnown RBP27.17■■□□□ 1.94
LSM7-206ENST00000591515 IQCA1Q86XH1 822 aa27.17■■□□□ 1.94
LSM7-206ENST00000591515 ATG4CQ96DT6 458 aa27.17■■□□□ 1.94
LSM7-206ENST00000591515 IGKV6D-41A0A0C4DH26 115 aa27.16■■□□□ 1.94
LSM7-206ENST00000591515 RNF180Q86T96 592 aa27.16■■□□□ 1.94
LSM7-206ENST00000591515 TIFAQ96CG3 184 aa27.16■■□□□ 1.94
LSM7-206ENST00000591515 TCP11L1Q9NUJ3 509 aa27.16■■□□□ 1.94
LSM7-206ENST00000591515 TMEM39AQ9NV64 488 aa27.16■■□□□ 1.94
LSM7-206ENST00000591515 MTMR4Q9NYA4 1195 aa27.16■■□□□ 1.94
LSM7-206ENST00000591515 NRBP1Q9UHY1 535 aa27.16■■□□□ 1.94
LSM7-206ENST00000591515 GREB1LQ9C091 1923 aaPredicted RBP27.16■■□□□ 1.94
LSM7-206ENST00000591515 FAAP100Q0VG06 881 aa27.15■■□□□ 1.94
LSM7-206ENST00000591515 NCOA7Q8NI08 942 aa27.15■■□□□ 1.94
LSM7-206ENST00000591515 LENG1Q96BZ8 264 aaPredicted RBP27.15■■□□□ 1.94
LSM7-206ENST00000591515 CEP95Q96GE4 821 aa27.15■■□□□ 1.94
LSM7-206ENST00000591515 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.15■■□□□ 1.94
LSM7-206ENST00000591515 INCENPQ9NQS7 918 aa27.15■■□□□ 1.94
LSM7-206ENST00000591515 NEDD4P46934 1319 aa27.15■■□□□ 1.94
LSM7-206ENST00000591515 FLOT1O75955 427 aa27.14■■□□□ 1.94
LSM7-206ENST00000591515 FCER1AP12319 257 aa27.14■■□□□ 1.94
LSM7-206ENST00000591515 TAL1P17542 331 aaPredicted RBP27.14■■□□□ 1.94
LSM7-206ENST00000591515 NECTIN1Q15223 517 aa27.14■■□□□ 1.94
LSM7-206ENST00000591515 CREB3L3Q68CJ9 461 aa27.14■■□□□ 1.94
LSM7-206ENST00000591515 VCPKMTQ9H867 229 aa27.14■■□□□ 1.94
LSM7-206ENST00000591515 CLIP2Q9UDT6 1046 aa27.14■■□□□ 1.94
LSM7-206ENST00000591515 STX8Q9UNK0 236 aa27.14■■□□□ 1.94
LSM7-206ENST00000591515 KDM4AO75164 1064 aa27.13■■□□□ 1.93
LSM7-206ENST00000591515 MCCP23508 829 aa27.13■■□□□ 1.93
LSM7-206ENST00000591515 ANKRD33Q7Z3H0 272 aa27.13■■□□□ 1.93
LSM7-206ENST00000591515 MKL1Q969V6 931 aa27.13■■□□□ 1.93
LSM7-206ENST00000591515 TTC14Q96N46 770 aa27.13■■□□□ 1.93
LSM7-206ENST00000591515 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.13■■□□□ 1.938e-8■■□□□ 12
LSM7-206ENST00000591515 BDP1A6H8Y1 2624 aa27.13■■□□□ 1.93
LSM7-206ENST00000591515 MCM3APO60318 1980 aa27.12■■□□□ 1.93
LSM7-206ENST00000591515 TCF20Q9UGU0 1960 aaKnown RBP27.12■■□□□ 1.93
LSM7-206ENST00000591515 B4E1Z4 1266 aa27.12■■□□□ 1.93
LSM7-206ENST00000591515 E7EWF7 191 aa27.12■■□□□ 1.93
LSM7-206ENST00000591515 SLC27A2O14975 620 aa27.12■■□□□ 1.93
LSM7-206ENST00000591515 ADAMTS4O75173 837 aa27.12■■□□□ 1.93
LSM7-206ENST00000591515 PGK2P07205 417 aa27.12■■□□□ 1.93
LSM7-206ENST00000591515 KRT32Q14532 448 aa27.12■■□□□ 1.93
LSM7-206ENST00000591515 TMEM132BQ14DG7 1078 aa27.12■■□□□ 1.93
LSM7-206ENST00000591515 CLEC10AQ8IUN9 316 aa27.12■■□□□ 1.93
LSM7-206ENST00000591515 PPM1EQ8WY54 764 aa27.12■■□□□ 1.93
LSM7-206ENST00000591515 TOX2Q96NM4 488 aa27.12■■□□□ 1.93
LSM7-206ENST00000591515 TINF2Q9BSI4 451 aa27.12■■□□□ 1.93
LSM7-206ENST00000591515 UBAC1Q9BSL1 405 aa27.12■■□□□ 1.93
LSM7-206ENST00000591515 ZNF865P0CJ78 1059 aaPredicted RBP27.11■■□□□ 1.93
LSM7-206ENST00000591515 SART3Q15020 963 aaKnown RBP27.11■■□□□ 1.93
LSM7-206ENST00000591515 SAMD1Q6SPF0 538 aaPredicted RBP27.11■■□□□ 1.93
LSM7-206ENST00000591515 SPICE1Q8N0Z3 855 aa27.11■■□□□ 1.93
LSM7-206ENST00000591515 ATXN2LQ8WWM7 1075 aaKnown RBP27.11■■□□□ 1.93
LSM7-206ENST00000591515 CHD9Q3L8U1 2897 aa27.11■■□□□ 1.93
LSM7-206ENST00000591515 WDR46O15213 610 aaKnown RBP27.1■■□□□ 1.93
LSM7-206ENST00000591515 RAD21O60216 631 aa27.1■■□□□ 1.93
LSM7-206ENST00000591515 SLC25A27O95847 323 aa27.1■■□□□ 1.93
LSM7-206ENST00000591515 PBX2P40425 430 aa27.1■■□□□ 1.93
LSM7-206ENST00000591515 SIAH1Q8IUQ4 282 aa27.1■■□□□ 1.93
LSM7-206ENST00000591515 GAS2L1Q99501 681 aaPredicted RBP27.1■■□□□ 1.93
LSM7-206ENST00000591515 MMP19Q99542 508 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms