RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 EEPD1Q7L9B9 569 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 HAUS6Q7Z4H7 955 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 KIAA1524Q8TCG1 905 aa12.74□□□□□ -0.37
SEH1L-208ENST00000590843 IPO4Q8TEX9 1081 aaKnown RBP12.74□□□□□ -0.37
SEH1L-208ENST00000590843 RPAP3Q9H6T3 665 aaPredicted RBP12.74□□□□□ -0.37
SEH1L-208ENST00000590843 YEATS4O95619 227 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 GH1P01241 217 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 SRGNP10124 158 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 IER5Q5VY09 327 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 SKIP12755 728 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 TPH2Q8IWU9 490 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.73□□□□□ -0.37
SEH1L-208ENST00000590843 CAPNS2Q96L46 248 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 LRRIQ4A6NIV6 560 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 DIXDC1Q155Q3 683 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 NBPF20Q3BBV1 942 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 PDXDC2PQ6P474 469 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 NECAB2Q7Z6G3 386 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 ZNF34Q8IZ26 560 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 BBS5Q8N3I7 341 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 SNX29Q8TEQ0 813 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 HAUS7Q99871 368 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 POLIQ9UNA4 740 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 MACROD2A1Z1Q3 448 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 INO80B-WBP1J3KQ70 363 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 CREB3L3Q68CJ9 461 aa12.73□□□□□ -0.37
SEH1L-208ENST00000590843 NUCB1Q02818 461 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 MNS1Q8NEH6 495 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 GCOM2Q9BZD3 368 aaPredicted RBP12.72□□□□□ -0.37
SEH1L-208ENST00000590843 DAPK3O43293 454 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 TMEM191BP0C7N4 346 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 STAG1Q8WVM7 1258 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 ZNF830Q96NB3 372 aaPredicted RBP12.72□□□□□ -0.37
SEH1L-208ENST00000590843 ZNF577Q9BSK1 485 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 EHD2Q9NZN4 543 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 ARHGAP23Q9P227 1491 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 PHKA2P46019 1235 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 AMPD2Q01433 879 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 PRR16Q569H4 304 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 DAAM2Q86T65 1068 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 MYCT1Q8N699 235 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.72□□□□□ -0.37
SEH1L-208ENST00000590843 STARD7Q9NQZ5 370 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 RAB23Q9ULC3 237 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
SEH1L-208ENST00000590843 CLTCL1P53675 1640 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 TXKP42681 527 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 CUL4BQ13620 913 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 LIN9Q5TKA1 542 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 SDR42E1Q8WUS8 393 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 CTNNBL1Q8WYA6 563 aaPredicted RBP12.72□□□□□ -0.37
SEH1L-208ENST00000590843 TRIM35Q9UPQ4 493 aa12.72□□□□□ -0.37
SEH1L-208ENST00000590843 CDC42BPBQ9Y5S2 1711 aa12.71□□□□□ -0.37
SEH1L-208ENST00000590843 CABYRO75952 493 aa12.71□□□□□ -0.37
SEH1L-208ENST00000590843 TNFAIP2Q03169 654 aa12.71□□□□□ -0.37
SEH1L-208ENST00000590843 OTUD6BQ8N6M0 293 aa12.71□□□□□ -0.37
SEH1L-208ENST00000590843 GANCQ8TET4 914 aa12.71□□□□□ -0.37
SEH1L-208ENST00000590843 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.71□□□□□ -0.37
SEH1L-208ENST00000590843 FAM49AQ9H0Q0 323 aaPredicted RBP12.71□□□□□ -0.37
SEH1L-208ENST00000590843 GOLGA6L9A6NEM1 432 aa12.71□□□□□ -0.37
SEH1L-208ENST00000590843 GNRH1P01148 92 aa12.71□□□□□ -0.37
SEH1L-208ENST00000590843 CDK8P49336 464 aa12.71□□□□□ -0.37
SEH1L-208ENST00000590843 FSIP1Q8NA03 581 aa12.71□□□□□ -0.37
SEH1L-208ENST00000590843 RGS12O14924 1447 aa12.71□□□□□ -0.37
SEH1L-208ENST00000590843 F8W8V4 182 aa12.71□□□□□ -0.38
SEH1L-208ENST00000590843 STK10O94804 968 aaKnown RBP12.71□□□□□ -0.38
SEH1L-208ENST00000590843 CNNM4Q6P4Q7 775 aa12.71□□□□□ -0.38
SEH1L-208ENST00000590843 ZNF654Q8IZM8 581 aa12.71□□□□□ -0.38
SEH1L-208ENST00000590843 APOL6Q9BWW8 343 aa12.71□□□□□ -0.38
SEH1L-208ENST00000590843 VIMP08670 466 aaKnown RBP12.71□□□□□ -0.38
SEH1L-208ENST00000590843 CXCL9Q07325 125 aa12.71□□□□□ -0.38
SEH1L-208ENST00000590843 FERMT3Q86UX7 667 aa12.71□□□□□ -0.38
SEH1L-208ENST00000590843 TMEM199Q8N511 208 aa12.71□□□□□ -0.38
SEH1L-208ENST00000590843 TMEM39AQ9NV64 488 aa12.71□□□□□ -0.38
SEH1L-208ENST00000590843 SETBP1Q9Y6X0 1596 aa12.71□□□□□ -0.38
SEH1L-208ENST00000590843 CROCC2H7BZ55 1655 aa12.71□□□□□ -0.38
SEH1L-208ENST00000590843 PTPROQ16827 1216 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 LRCH2Q5VUJ6 765 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 ATL3Q6DD88 541 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 SESTD1Q86VW0 696 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 SEPT8Q92599 483 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 KIF1AQ12756 1690 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 GNASQ5JWF2 1037 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 SSH3Q8TE77 659 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 UTYO14607 1347 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 KYAT1Q16773 422 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 RMDN3Q96TC7 470 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 MTMR2Q13614 643 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 TWF2Q6IBS0 349 aaKnown RBP12.7□□□□□ -0.38
SEH1L-208ENST00000590843 CDCA5Q96FF9 252 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 CTAGE1Q96RT6 745 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 GLIS2Q9BZE0 524 aaPredicted RBP12.7□□□□□ -0.38
SEH1L-208ENST00000590843 SNX25Q9H3E2 840 aa12.7□□□□□ -0.38
SEH1L-208ENST00000590843 SYKP43405 635 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 AP3B2Q13367 1082 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 PROSER3Q2NL68 480 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 FAM83BQ5T0W9 1011 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 MROH7Q68CQ1 1323 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 MYPNQ86TC9 1320 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 SREK1Q8WXA9 508 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms