RNA–Protein interactions for RNA: ENST00000590498.5

TUBD1-210, Transcript of tubulin delta 1, humanhuman

TSL 4

Gene TUBD1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-210ENST00000590498 RNPC3Q96LT9 517 aaKnown RBP12.73□□□□□ -0.37
TUBD1-210ENST00000590498 TOX2Q96NM4 488 aa12.73□□□□□ -0.37
TUBD1-210ENST00000590498 HS3ST6Q96QI5 342 aa12.73□□□□□ -0.37
TUBD1-210ENST00000590498 SLF1Q9BQI6 1058 aa12.73□□□□□ -0.37
TUBD1-210ENST00000590498 TMEM39AQ9NV64 488 aa12.73□□□□□ -0.37
TUBD1-210ENST00000590498 TBX21Q9UL17 535 aa12.73□□□□□ -0.37
TUBD1-210ENST00000590498 PLXNA1Q9UIW2 1896 aa12.72□□□□□ -0.37
TUBD1-210ENST00000590498 SYNGAP1Q96PV0 1343 aa12.72□□□□□ -0.37
TUBD1-210ENST00000590498 ATP2A1O14983 1001 aa12.72□□□□□ -0.37
TUBD1-210ENST00000590498 FPGSQ05932 587 aa12.72□□□□□ -0.37
TUBD1-210ENST00000590498 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.72□□□□□ -0.37
TUBD1-210ENST00000590498 TEX13BQ9BXU2 312 aa12.72□□□□□ -0.37
TUBD1-210ENST00000590498 KATNBL1Q9H079 304 aa12.72□□□□□ -0.37
TUBD1-210ENST00000590498 RAVER2Q9HCJ3 691 aaKnown RBP12.72□□□□□ -0.37
TUBD1-210ENST00000590498 EPB41L4AQ9HCS5 686 aaPredicted RBP12.72□□□□□ -0.37
TUBD1-210ENST00000590498 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
TUBD1-210ENST00000590498 FAM184BQ9ULE4 1060 aa12.72□□□□□ -0.37
TUBD1-210ENST00000590498 DDX19BQ9UMR2 479 aa12.72□□□□□ -0.37
TUBD1-210ENST00000590498 CNPY2Q9Y2B0 182 aa12.72□□□□□ -0.37
TUBD1-210ENST00000590498 REV3LO60673 3130 aa12.72□□□□□ -0.37
TUBD1-210ENST00000590498 MYH8P13535 1937 aa12.72□□□□□ -0.37
TUBD1-210ENST00000590498 MUC3AQ02505 3323 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 GRXCR1A8MXD5 290 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 MINDY4BA8MYZ0 360 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 DUSP11O75319 330 aaKnown RBP12.71□□□□□ -0.37
TUBD1-210ENST00000590498 TIMP1P01033 207 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 FOSL2P15408 326 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 PTGS1P23219 599 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 PBX2P40425 430 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 SLC4A3P48751 1232 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 PDAP1Q13442 181 aaKnown RBP12.71□□□□□ -0.37
TUBD1-210ENST00000590498 ACVR2BQ13705 512 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 TSHZ3Q63HK5 1081 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.71□□□□□ -0.37
TUBD1-210ENST00000590498 CPXCR1Q8N123 301 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 MSL3Q8N5Y2 521 aaKnown RBP12.71□□□□□ -0.37
TUBD1-210ENST00000590498 PRPF38AQ8NAV1 312 aaKnown RBP12.71□□□□□ -0.37
TUBD1-210ENST00000590498 MKL1Q969V6 931 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 SLC38A10Q9HBR0 1119 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 STARD7Q9NQZ5 370 aa12.71□□□□□ -0.37
TUBD1-210ENST00000590498 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.71□□□□□ -0.37
TUBD1-210ENST00000590498 ARPP21Q9UBL0 812 aaPredicted RBP12.71□□□□□ -0.37
TUBD1-210ENST00000590498 ZHX1Q9UKY1 873 aaPredicted RBP12.71□□□□□ -0.37
TUBD1-210ENST00000590498 DDX49Q9Y6V7 483 aaKnown RBP12.71□□□□□ -0.37
TUBD1-210ENST00000590498 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-210ENST00000590498 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-210ENST00000590498 POTEB3A0JP26 581 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 FAM205CA6NFA0 338 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 DCDC2CA8MYV0 355 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 PRDM1O75626 825 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 ASGR1P07306 291 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 DNAJB2P25686 324 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 CST5P28325 142 aaPredicted RBP12.7□□□□□ -0.38
TUBD1-210ENST00000590498 COPB2P35606 906 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 CNTN2Q02246 1040 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 CCDC144BQ3MJ40 725 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 TMEM240Q5SV17 173 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 RASIP1Q5U651 963 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 POTEBQ6S5H4 581 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 AMOTL1Q8IY63 956 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 DDX11Q96FC9 970 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 CEP95Q96GE4 821 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 KRTAP3-3Q9BYR6 98 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 KRTAP3-2Q9BYR7 98 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 LRRCC1Q9C099 1032 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 UPF3AQ9H1J1 476 aaKnown RBP12.7□□□□□ -0.38
TUBD1-210ENST00000590498 PRDM6Q9NQX0 595 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 CHD7Q9P2D1 2997 aa12.7□□□□□ -0.38
TUBD1-210ENST00000590498 ASTN1O14525 1302 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 ELP1O95163 1332 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 TMEM265A0A087WTH1 108 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 M0R2C6 588 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 MS4A1P11836 297 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 GJA9P57773 515 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 TMEM63BQ5T3F8 832 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 MFSD5Q6N075 450 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 ZSCAN25Q6NSZ9 544 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 GIMAP6Q6P9H5 292 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 KBTBD3Q8NAB2 608 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 NUP133Q8WUM0 1156 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 KIFC2Q96AC6 838 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 ZNF576Q9H609 170 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 MKNK2Q9HBH9 465 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 ECHDC1Q9NTX5 307 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 MTMR4Q9NYA4 1195 aa12.69□□□□□ -0.38
TUBD1-210ENST00000590498 ZNF536O15090 1300 aa12.68□□□□□ -0.38
TUBD1-210ENST00000590498 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.68□□□□□ -0.38
TUBD1-210ENST00000590498 SOWAHBA6NEL2 793 aa12.68□□□□□ -0.38
TUBD1-210ENST00000590498 ARVCFO00192 962 aa12.68□□□□□ -0.38
TUBD1-210ENST00000590498 RNF113AO15541 343 aaKnown RBP12.68□□□□□ -0.38
TUBD1-210ENST00000590498 ZBED4O75132 1171 aa12.68□□□□□ -0.38
TUBD1-210ENST00000590498 C6orf222P0C671 652 aaPredicted RBP12.68□□□□□ -0.38
TUBD1-210ENST00000590498 ACRP10323 421 aa12.68□□□□□ -0.38
TUBD1-210ENST00000590498 CSF2RAP15509 400 aa12.68□□□□□ -0.38
TUBD1-210ENST00000590498 NKX3-2P78367 333 aa12.68□□□□□ -0.38
TUBD1-210ENST00000590498 ARMCX2Q7L311 632 aa12.68□□□□□ -0.38
TUBD1-210ENST00000590498 FAM126BQ8IXS8 530 aa12.68□□□□□ -0.38
TUBD1-210ENST00000590498 CCDC144CPQ8IYA2 1237 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms