RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 ZNF236Q9UL36 1845 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 CCDC171Q6TFL3 1326 aa9.82□□□□□ -0.84
TPM4-211ENST00000589897 PLIN4Q96Q06 1357 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 TMEM232C9JQI7 657 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 FGAP02671 866 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 PGK2P07205 417 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 FDX1P10109 184 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 HSPD1P10809 573 aaKnown RBP9.81□□□□□ -0.84
TPM4-211ENST00000589897 SDSP20132 328 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 MCCP23508 829 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 STAT2P52630 851 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 ALX1Q15699 326 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 TMEM31Q5JXX7 168 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 C1orf53Q5VUE5 145 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 FAM160B2Q86V87 743 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 PLEKHM2Q8IWE5 1019 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 ANKRD35Q8N283 1001 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 MAML3Q96JK9 1138 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 LRFN3Q9BTN0 628 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 RAVER2Q9HCJ3 691 aaKnown RBP9.81□□□□□ -0.84
TPM4-211ENST00000589897 FBXO40Q9UH90 709 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 ANAPC4Q9UJX5 808 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 ZNF214Q9UL59 606 aaPredicted RBP9.81□□□□□ -0.84
TPM4-211ENST00000589897 CNPY2Q9Y2B0 182 aa9.81□□□□□ -0.84
TPM4-211ENST00000589897 SEPT4O43236 478 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 ORC4O43929 436 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 CYBAP13498 195 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 HAND2P61296 217 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 CCDC96Q2M329 555 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 PRAMEF19Q5SWL8 479 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 ANO1Q5XXA6 986 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 CCDC174Q6PII3 467 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 CWC27Q6UX04 472 aaKnown RBP9.8□□□□□ -0.84
TPM4-211ENST00000589897 MFSD6Q6ZSS7 791 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 STAG1Q8WVM7 1258 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 SNX27Q96L92 541 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 TINF2Q9BSI4 451 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 OSBPL3Q9H4L5 887 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 RNF41Q9H4P4 317 aaPredicted RBP9.8□□□□□ -0.84
TPM4-211ENST00000589897 INCENPQ9NQS7 918 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 HOMER2Q9NSB8 354 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 DIS3Q9Y2L1 958 aaKnown RBP9.8□□□□□ -0.84
TPM4-211ENST00000589897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.8□□□□□ -0.84
TPM4-211ENST00000589897 PLXNA1Q9UIW2 1896 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 ALPK3Q96L96 1907 aa9.8□□□□□ -0.84
TPM4-211ENST00000589897 TTC28Q96AY4 2481 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 TRIM43BA6NCK2 446 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 ZNF213O14771 459 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 ATP2A1O14983 1001 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 NMT2O60551 498 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 RARBP10826 455 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 PCP11498 1178 aaKnown RBP9.79□□□□□ -0.84
TPM4-211ENST00000589897 RAG1P15918 1043 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 OAZ1P54368 228 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 IRX6P78412 446 aaPredicted RBP9.79□□□□□ -0.84
TPM4-211ENST00000589897 FPGSQ05932 587 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 SNX17Q15036 470 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 ZNF792Q3KQV3 632 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 TRIM60Q495X7 471 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 GJC2Q5T442 439 aaPredicted RBP9.79□□□□□ -0.84
TPM4-211ENST00000589897 RCSD1Q6JBY9 416 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 KCTD1Q719H9 257 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 ZNF589Q86UQ0 364 aaPredicted RBP9.79□□□□□ -0.84
TPM4-211ENST00000589897 ALYREFQ86V81 257 aaKnown RBP9.79□□□□□ -0.84
TPM4-211ENST00000589897 TRPV1Q8NER1 839 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 CHST13Q8NET6 341 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 REPS2Q8NFH8 660 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 TRIM43Q96BQ3 446 aaPredicted RBP9.79□□□□□ -0.84
TPM4-211ENST00000589897 GMCL1Q96IK5 515 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 SLC38A10Q9HBR0 1119 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 PDLIM7Q9NR12 457 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 CXXC1Q9P0U4 656 aaPredicted RBP9.79□□□□□ -0.84
TPM4-211ENST00000589897 NRBP1Q9UHY1 535 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 FRMPD3Q5JV73 1810 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 PRUNE2Q8WUY3 3088 aa9.79□□□□□ -0.84
TPM4-211ENST00000589897 FOXP2O15409 715 aa9.78□□□□□ -0.84
TPM4-211ENST00000589897 TOP1P11387 765 aaKnown RBP9.78□□□□□ -0.84
TPM4-211ENST00000589897 BMP1P13497 986 aa9.78□□□□□ -0.84
TPM4-211ENST00000589897 IGFBP4P22692 258 aa9.78□□□□□ -0.84
TPM4-211ENST00000589897 CCDC85BQ15834 202 aaPredicted RBP9.78□□□□□ -0.84
TPM4-211ENST00000589897 DCAF4Q8WV16 495 aa9.78□□□□□ -0.84
TPM4-211ENST00000589897 ESR2Q92731 530 aa9.78□□□□□ -0.84
TPM4-211ENST00000589897 ACAD9Q9H845 621 aa9.78□□□□□ -0.84
TPM4-211ENST00000589897 XPNPEP3Q9NQH7 507 aa9.78□□□□□ -0.84
TPM4-211ENST00000589897 IL17RBQ9NRM6 502 aa9.78□□□□□ -0.84
TPM4-211ENST00000589897 RIPK3Q9Y572 518 aa9.78□□□□□ -0.84
TPM4-211ENST00000589897 SPTBN5Q9NRC6 3674 aaKnown RBP9.78□□□□□ -0.84
TPM4-211ENST00000589897 ZMYM6O95789 1325 aa9.78□□□□□ -0.84
TPM4-211ENST00000589897 SMCHD1A6NHR9 2005 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 EYSQ5T1H1 3165 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 KIAA0355O15063 1070 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 GPR37L1O60883 481 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 CLTBP09497 229 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 ALAS1P13196 640 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 AKR1A1P14550 325 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 IMMTQ16891 758 aaKnown RBP9.77□□□□□ -0.85
TPM4-211ENST00000589897 TKFCQ3LXA3 575 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 CCDC178Q5BJE1 867 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 SH3RF1Q7Z6J0 888 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 RNF180Q86T96 592 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms