RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 ICA1Q05084 483 aa11.74□□□□□ -0.53
APOC1-205ENST00000589781 SPP2Q13103 211 aa11.74□□□□□ -0.53
APOC1-205ENST00000589781 SEPT2Q15019 361 aa11.74□□□□□ -0.53
APOC1-205ENST00000589781 ABCB5Q2M3G0 1257 aa11.74□□□□□ -0.53
APOC1-205ENST00000589781 USP17L2Q6R6M4 530 aa11.74□□□□□ -0.53
APOC1-205ENST00000589781 DIS3L2Q8IYB7 885 aaKnown RBP11.74□□□□□ -0.53
APOC1-205ENST00000589781 RGS22Q8NE09 1264 aa11.74□□□□□ -0.53
APOC1-205ENST00000589781 SPATA32Q96LK8 384 aa11.74□□□□□ -0.53
APOC1-205ENST00000589781 ZNF396Q96N95 335 aaPredicted RBP11.74□□□□□ -0.53
APOC1-205ENST00000589781 CPA4Q9UI42 421 aa11.74□□□□□ -0.53
APOC1-205ENST00000589781 KLRF2D3W0D1 207 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 CYTH3O43739 400 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 ELP1O95163 1332 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 GH2P01242 217 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 PTPRFP10586 1907 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 PDHBP11177 359 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 BCRP11274 1271 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 SCG2P13521 617 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 UBE2HP62256 183 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 SP3Q02447 781 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 CCDC96Q2M329 555 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 TMEM179Q6ZVK1 233 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 GPKOWQ92917 476 aaPredicted RBP eCLIP11.73□□□□□ -0.53
APOC1-205ENST00000589781 SCAND2PQ9GZW5 306 aaPredicted RBP11.73□□□□□ -0.53
APOC1-205ENST00000589781 ZFYVE28Q9HCC9 887 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 ZCCHC17Q9NP64 241 aaKnown RBP11.73□□□□□ -0.53
APOC1-205ENST00000589781 PICK1Q9NRD5 415 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 TMEM63CQ9P1W3 806 aa11.73□□□□□ -0.53
APOC1-205ENST00000589781 BTBD18B2RXH4 712 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 PEX10O60683 326 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 EEF2P13639 858 aaKnown RBP11.72□□□□□ -0.53
APOC1-205ENST00000589781 NR5A1Q13285 461 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 SAFBQ15424 915 aaKnown RBP eCLIP11.72□□□□□ -0.53
APOC1-205ENST00000589781 PFKFB3Q16875 520 aaPredicted RBP11.72□□□□□ -0.53
APOC1-205ENST00000589781 SH3D19Q5HYK7 790 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 PPP4R3BQ5MIZ7 849 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 WWC2Q6AWC2 1192 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 SIAH1Q8IUQ4 282 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 ZNF280CQ8ND82 737 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 WDR18Q9BV38 432 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 PHF20Q9BVI0 1012 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 SPZ1Q9BXG8 430 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 GPCPD1Q9NPB8 672 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 NYAP2Q9P242 653 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 ZBTB21Q9ULJ3 1066 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 ISY1Q9ULR0 285 aaKnown RBP11.72□□□□□ -0.53
APOC1-205ENST00000589781 TRIM17Q9Y577 477 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 CLIC4Q9Y696 253 aa11.72□□□□□ -0.53
APOC1-205ENST00000589781 FAM205CA6NFA0 338 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 CCDC85CA6NKD9 419 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 RAD21O60216 631 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 ECM2O94769 699 aaPredicted RBP11.71□□□□□ -0.53
APOC1-205ENST00000589781 SNHG28P0DPA3 235 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 XBP1P17861 261 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 U2AF2P26368 475 aaKnown RBP eCLIP11.71□□□□□ -0.53
APOC1-205ENST00000589781 KRT2P35908 639 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 HMGCS2P54868 508 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 GSE1Q14687 1217 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 ASPRV1Q53RT3 343 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 FBXO46Q6PJ61 603 aaPredicted RBP11.71□□□□□ -0.53
APOC1-205ENST00000589781 GADL1Q6ZQY3 521 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 HOMER1Q86YM7 354 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 NOSTRINQ8IVI9 506 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 ACER1Q8TDN7 264 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 PGBD1Q96JS3 809 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 LZTS2Q9BRK4 669 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 UBA5Q9GZZ9 404 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 KANSL2Q9H9L4 492 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 CABP5Q9NP86 173 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 CFAP45Q9UL16 551 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 PTPN22Q9Y2R2 807 aa11.71□□□□□ -0.53
APOC1-205ENST00000589781 A0A1W2PRG0 241 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 STXBP3O00186 592 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 ADAMTS3O15072 1205 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 RGS19P49795 217 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 LACTBP83111 547 aaPredicted RBP11.7□□□□□ -0.54
APOC1-205ENST00000589781 ZNF543Q08ER8 600 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 STK38Q15208 465 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 NPY5RQ15761 445 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 KIAA1755Q5JYT7 1200 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 ATL3Q6DD88 541 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 TTBK2Q6IQ55 1244 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 TYW1BQ6NUM6 668 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 KCTD1Q719H9 257 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 HEATR3Q7Z4Q2 680 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 BICD2Q8TD16 824 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 TRIM47Q96LD4 638 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 PIGSQ96S52 555 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 FOXP1Q9H334 677 aaPredicted RBP11.7□□□□□ -0.54
APOC1-205ENST00000589781 EMILIN3Q9NT22 766 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 RTEL1Q9NZ71 1219 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 AGTPBP1Q9UPW5 1226 aa11.7□□□□□ -0.54
APOC1-205ENST00000589781 LOC285556D6RIA3 1793 aa11.69□□□□□ -0.54
APOC1-205ENST00000589781 YEATS4O95619 227 aa11.69□□□□□ -0.54
APOC1-205ENST00000589781 LIG1P18858 919 aa11.69□□□□□ -0.54
APOC1-205ENST00000589781 NASPP49321 788 aaPredicted RBP11.69□□□□□ -0.54
APOC1-205ENST00000589781 BACE1P56817 501 aa11.69□□□□□ -0.54
APOC1-205ENST00000589781 NLRP5P59047 1200 aa11.69□□□□□ -0.54
APOC1-205ENST00000589781 MTMR2Q13614 643 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms