RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 ACAD9Q9H845 621 aa13.19□□□□□ -0.3
DDX39A-210ENST00000589675 ATP11BQ9Y2G3 1177 aa13.19□□□□□ -0.3
DDX39A-210ENST00000589675 NMT2O60551 498 aa13.18□□□□□ -0.3
DDX39A-210ENST00000589675 DUSP11O75319 330 aaKnown RBP13.18□□□□□ -0.3
DDX39A-210ENST00000589675 PGK1P00558 417 aa13.18□□□□□ -0.3
DDX39A-210ENST00000589675 NT5C2P49902 561 aa13.18□□□□□ -0.3
DDX39A-210ENST00000589675 MFAP1P55081 439 aaKnown RBP13.18□□□□□ -0.3
DDX39A-210ENST00000589675 NUCB1Q02818 461 aa13.18□□□□□ -0.3
DDX39A-210ENST00000589675 NMIQ13287 307 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-210ENST00000589675 ACVR2BQ13705 512 aa13.18□□□□□ -0.3
DDX39A-210ENST00000589675 BTNL9Q6UXG8 535 aa13.18□□□□□ -0.3
DDX39A-210ENST00000589675 CHD1LQ86WJ1 897 aa13.18□□□□□ -0.3
DDX39A-210ENST00000589675 FAM133AQ8N9E0 248 aa13.18□□□□□ -0.3
DDX39A-210ENST00000589675 KLHDC9Q8NEP7 349 aa13.18□□□□□ -0.3
DDX39A-210ENST00000589675 DCAF4Q8WV16 495 aa13.18□□□□□ -0.3
DDX39A-210ENST00000589675 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-210ENST00000589675 CCDC171Q6TFL3 1326 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 A0A1W2PQ45 241 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-210ENST00000589675 A0A1W2PQY0 241 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 MOXD2PA6NHM9 499 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 TRIM6-TRIM34B2RNG4 842 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-210ENST00000589675 TOP1P11387 765 aaKnown RBP13.17□□□□□ -0.3
DDX39A-210ENST00000589675 CST5P28325 142 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-210ENST00000589675 SLC4A3P48751 1232 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 NKX3-2P78367 333 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 IKQ13123 557 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-210ENST00000589675 TRIM60Q495X7 471 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 CCSAPQ6IQ19 270 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-210ENST00000589675 KCTD1Q719H9 257 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 ZNF589Q86UQ0 364 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-210ENST00000589675 PLEKHM2Q8IWE5 1019 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 FERMT2Q96AC1 680 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 AGBL1Q96MI9 1066 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 TTC14Q96N46 770 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 TOX2Q96NM4 488 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 A1CFQ9NQ94 594 aaKnown RBP13.17□□□□□ -0.3
DDX39A-210ENST00000589675 PDLIM7Q9NR12 457 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
DDX39A-210ENST00000589675 SYNRGQ9UMZ2 1314 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 IGHDP01880 384 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 SDSP20132 328 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 ACLYP53396 1101 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 TLE2Q04725 743 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 CCDC144BQ3MJ40 725 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 AKNAD1Q5T1N1 836 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 ARMCX2Q7L311 632 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 ANKRD33Q7Z3H0 272 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 CCDC144CPQ8IYA2 1237 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 NUP133Q8WUM0 1156 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 RILPL2Q969X0 211 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 TRERF1Q96PN7 1200 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 KATNBL1Q9H079 304 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 UPF3AQ9H1J1 476 aaKnown RBP13.16□□□□□ -0.3
DDX39A-210ENST00000589675 HOMER2Q9NSB8 354 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 ZHX1Q9UKY1 873 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-210ENST00000589675 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
DDX39A-210ENST00000589675 TRIM43BA6NCK2 446 aa13.15□□□□□ -0.3
DDX39A-210ENST00000589675 ASB14A6NK59 587 aa13.15□□□□□ -0.3
DDX39A-210ENST00000589675 ICAM1P05362 532 aa13.15□□□□□ -0.3
DDX39A-210ENST00000589675 GJA9P57773 515 aa13.15□□□□□ -0.3
DDX39A-210ENST00000589675 CNTN2Q02246 1040 aa13.15□□□□□ -0.3
DDX39A-210ENST00000589675 KCNA10Q16322 511 aa13.15□□□□□ -0.3
DDX39A-210ENST00000589675 FAM109BQ6ICB4 259 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-210ENST00000589675 B4GALNT3Q6L9W6 998 aa13.15□□□□□ -0.3
DDX39A-210ENST00000589675 MFSD6Q6ZSS7 791 aa13.15□□□□□ -0.3
DDX39A-210ENST00000589675 PCSK9Q8NBP7 692 aaKnown RBP13.15□□□□□ -0.3
DDX39A-210ENST00000589675 TRIM43Q96BQ3 446 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-210ENST00000589675 LENG1Q96BZ8 264 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-210ENST00000589675 YTHDC1Q96MU7 727 aaKnown RBP13.15□□□□□ -0.3
DDX39A-210ENST00000589675 TMEM47Q9BQJ4 181 aa13.15□□□□□ -0.3
DDX39A-210ENST00000589675 RANBP17Q9H2T7 1088 aaKnown RBP13.15□□□□□ -0.3
DDX39A-210ENST00000589675 RNF41Q9H4P4 317 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-210ENST00000589675 SPC25Q9HBM1 224 aa13.15□□□□□ -0.3
DDX39A-210ENST00000589675 PNMA2Q9UL42 364 aa13.15□□□□□ -0.3
DDX39A-210ENST00000589675 ISY1Q9ULR0 285 aaKnown RBP13.15□□□□□ -0.3
DDX39A-210ENST00000589675 LCTP09848 1927 aa13.15□□□□□ -0.3
DDX39A-210ENST00000589675 ELP1O95163 1332 aa13.14□□□□□ -0.31
DDX39A-210ENST00000589675 LOC102724159A0A0B4J2E5 919 aa13.14□□□□□ -0.31
DDX39A-210ENST00000589675 SOWAHBA6NEL2 793 aa13.14□□□□□ -0.31
DDX39A-210ENST00000589675 HIP1O00291 1037 aa13.14□□□□□ -0.31
DDX39A-210ENST00000589675 KIAA0355O15063 1070 aa13.14□□□□□ -0.31
DDX39A-210ENST00000589675 CLTBP09497 229 aa13.14□□□□□ -0.31
DDX39A-210ENST00000589675 ALAS1P13196 640 aa13.14□□□□□ -0.31
DDX39A-210ENST00000589675 PWP2Q15269 919 aaKnown RBP13.14□□□□□ -0.31
DDX39A-210ENST00000589675 SH3RF1Q7Z6J0 888 aa13.14□□□□□ -0.31
DDX39A-210ENST00000589675 DEFB123Q8N688 67 aa13.14□□□□□ -0.31
DDX39A-210ENST00000589675 EXOC6Q8TAG9 804 aa13.14□□□□□ -0.31
DDX39A-210ENST00000589675 PRDM5Q9NQX1 630 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-210ENST00000589675 TOMM22Q9NS69 142 aa13.14□□□□□ -0.31
DDX39A-210ENST00000589675 CYP39A1Q9NYL5 469 aa13.14□□□□□ -0.31
DDX39A-210ENST00000589675 ADCY6O43306 1168 aa13.13□□□□□ -0.31
DDX39A-210ENST00000589675 SNHG28P0DPA3 235 aa13.13□□□□□ -0.31
DDX39A-210ENST00000589675 CDK7P50613 346 aa13.13□□□□□ -0.31
DDX39A-210ENST00000589675 HAND2P61296 217 aa13.13□□□□□ -0.31
DDX39A-210ENST00000589675 CCDC96Q2M329 555 aa13.13□□□□□ -0.31
DDX39A-210ENST00000589675 MUM1L1Q5H9M0 696 aa13.13□□□□□ -0.31
DDX39A-210ENST00000589675 RRP12Q5JTH9 1297 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms