RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 TRIM43Q96BQ3 446 aaPredicted RBP28.18■■■□□ 2.1
LSM7-205ENST00000589532 KATNBL1Q9H079 304 aa28.18■■■□□ 2.1
LSM7-205ENST00000589532 HELLSQ9NRZ9 838 aa28.18■■■□□ 2.1
LSM7-205ENST00000589532 ZMYM6O95789 1325 aa28.18■■■□□ 2.1
LSM7-205ENST00000589532 ORC4O43929 436 aa28.17■■■□□ 2.1
LSM7-205ENST00000589532 TLE2Q04725 743 aa28.17■■■□□ 2.1
LSM7-205ENST00000589532 FAM160B2Q86V87 743 aa28.17■■■□□ 2.1
LSM7-205ENST00000589532 FAM227BQ96M60 508 aa28.17■■■□□ 2.1
LSM7-205ENST00000589532 MTMR10Q9NXD2 777 aa28.17■■■□□ 2.1
LSM7-205ENST00000589532 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.17■■■□□ 2.1
LSM7-205ENST00000589532 EYSQ5T1H1 3165 aa28.16■■■□□ 2.1
LSM7-205ENST00000589532 TSPY2A6NKD2 308 aa28.16■■■□□ 2.1
LSM7-205ENST00000589532 PPP4R3BQ5MIZ7 849 aa28.16■■■□□ 2.1
LSM7-205ENST00000589532 TICAM2Q86XR7 235 aa28.16■■■□□ 2.1
LSM7-205ENST00000589532 ANKRD35Q8N283 1001 aa28.16■■■□□ 2.1
LSM7-205ENST00000589532 FAM133AQ8N9E0 248 aa28.16■■■□□ 2.1
LSM7-205ENST00000589532 STAG1Q8WVM7 1258 aa28.16■■■□□ 2.1
LSM7-205ENST00000589532 TSEN34Q9BSV6 310 aaKnown RBP28.16■■■□□ 2.1
LSM7-205ENST00000589532 PRDM5Q9NQX1 630 aaPredicted RBP28.16■■■□□ 2.1
LSM7-205ENST00000589532 ZHX1Q9UKY1 873 aaPredicted RBP28.16■■■□□ 2.1
LSM7-205ENST00000589532 FAM184BQ9ULE4 1060 aa28.16■■■□□ 2.1
LSM7-205ENST00000589532 STX8Q9UNK0 236 aa28.16■■■□□ 2.1
LSM7-205ENST00000589532 MYADML2A6NDP7 307 aa28.15■■■□□ 2.1
LSM7-205ENST00000589532 MCCP23508 829 aa28.15■■■□□ 2.1
LSM7-205ENST00000589532 ITGB8P26012 769 aa28.15■■■□□ 2.1
LSM7-205ENST00000589532 CST5P28325 142 aaPredicted RBP28.15■■■□□ 2.1
LSM7-205ENST00000589532 SLC1A4P43007 532 aa28.15■■■□□ 2.1
LSM7-205ENST00000589532 SLC4A3P48751 1232 aa28.15■■■□□ 2.1
LSM7-205ENST00000589532 ACVR2BQ13705 512 aa28.15■■■□□ 2.1
LSM7-205ENST00000589532 ARMCX2Q7L311 632 aa28.15■■■□□ 2.1
LSM7-205ENST00000589532 BADQ92934 168 aa28.15■■■□□ 2.1
LSM7-205ENST00000589532 ACAD9Q9H845 621 aa28.15■■■□□ 2.1
LSM7-205ENST00000589532 A1CFQ9NQ94 594 aaKnown RBP28.15■■■□□ 2.1
LSM7-205ENST00000589532 CTDP1Q9Y5B0 961 aaPredicted RBP28.15■■■□□ 2.1
LSM7-205ENST00000589532 CUL9Q8IWT3 2517 aa28.15■■■□□ 2.1
LSM7-205ENST00000589532 LAMA4Q16363 1823 aa28.14■■■□□ 2.1
LSM7-205ENST00000589532 DUSP11O75319 330 aaKnown RBP28.14■■■□□ 2.1
LSM7-205ENST00000589532 ACLYP53396 1101 aa28.14■■■□□ 2.1
LSM7-205ENST00000589532 ZNF589Q86UQ0 364 aaPredicted RBP28.14■■■□□ 2.1
LSM7-205ENST00000589532 SMC5Q8IY18 1101 aa28.14■■■□□ 2.1
LSM7-205ENST00000589532 AGBL1Q96MI9 1066 aa28.14■■■□□ 2.1
LSM7-205ENST00000589532 UPF3AQ9H1J1 476 aaKnown RBP28.14■■■□□ 2.1
LSM7-205ENST00000589532 ABHD16BQ9H3Z7 469 aa28.14■■■□□ 2.1
LSM7-205ENST00000589532 HOMER2Q9NSB8 354 aa28.14■■■□□ 2.1
LSM7-205ENST00000589532 ASTN1O14525 1302 aa28.14■■■□□ 2.09
LSM7-205ENST00000589532 POTEB2H3BUK9 544 aa28.13■■■□□ 2.09
LSM7-205ENST00000589532 C9orf50Q5SZB4 431 aa28.13■■■□□ 2.09
LSM7-205ENST00000589532 KCTD1Q719H9 257 aa28.13■■■□□ 2.09
LSM7-205ENST00000589532 CHURC1Q8WUH1 139 aa28.13■■■□□ 2.09
LSM7-205ENST00000589532 RNF146Q9NTX7 359 aa28.13■■■□□ 2.09
LSM7-205ENST00000589532 MOXD2PA6NHM9 499 aa28.12■■■□□ 2.09
LSM7-205ENST00000589532 FGAP02671 866 aa28.12■■■□□ 2.09
LSM7-205ENST00000589532 CLTBP09497 229 aa28.12■■■□□ 2.09
LSM7-205ENST00000589532 IRX5P78411 483 aaPredicted RBP28.12■■■□□ 2.09
LSM7-205ENST00000589532 CNTN2Q02246 1040 aa28.12■■■□□ 2.09
LSM7-205ENST00000589532 FAM109BQ6ICB4 259 aaPredicted RBP28.12■■■□□ 2.09
LSM7-205ENST00000589532 RCSD1Q6JBY9 416 aa28.12■■■□□ 2.09
LSM7-205ENST00000589532 ANKRD33Q7Z3H0 272 aa28.12■■■□□ 2.09
LSM7-205ENST00000589532 CCDC144CPQ8IYA2 1237 aa28.12■■■□□ 2.09
LSM7-205ENST00000589532 PRR12Q9ULL5 1215 aa28.12■■■□□ 2.09
LSM7-205ENST00000589532 STXBP5LQ9Y2K9 1186 aa28.12■■■□□ 2.09
LSM7-205ENST00000589532 KIAA0355O15063 1070 aa28.11■■■□□ 2.09
LSM7-205ENST00000589532 SHHQ15465 462 aa28.11■■■□□ 2.09
LSM7-205ENST00000589532 TKFCQ3LXA3 575 aa28.11■■■□□ 2.09
LSM7-205ENST00000589532 MCMDC2Q4G0Z9 681 aa28.11■■■□□ 2.09
LSM7-205ENST00000589532 SOWAHBA6NEL2 793 aa28.1■■■□□ 2.09
LSM7-205ENST00000589532 CTAGE5O15320 804 aa28.1■■■□□ 2.09
LSM7-205ENST00000589532 RANBP6O60518 1105 aaKnown RBP28.1■■■□□ 2.09
LSM7-205ENST00000589532 HSPD1P10809 573 aaKnown RBP28.1■■■□□ 2.09
LSM7-205ENST00000589532 NKX3-2P78367 333 aa28.1■■■□□ 2.09
LSM7-205ENST00000589532 NMIQ13287 307 aaPredicted RBP28.1■■■□□ 2.09
LSM7-205ENST00000589532 CCDC144BQ3MJ40 725 aa28.1■■■□□ 2.09
LSM7-205ENST00000589532 CHMP4CQ96CF2 233 aa28.1■■■□□ 2.09
LSM7-205ENST00000589532 TOX2Q96NM4 488 aa28.1■■■□□ 2.09
LSM7-205ENST00000589532 LNPKQ9C0E8 428 aa28.1■■■□□ 2.09
LSM7-205ENST00000589532 PQBP1O60828 265 aaKnown RBP28.09■■■□□ 2.09
LSM7-205ENST00000589532 GJA9P57773 515 aa28.09■■■□□ 2.09
LSM7-205ENST00000589532 KCNA10Q16322 511 aa28.09■■■□□ 2.09
LSM7-205ENST00000589532 DCAF4Q8WV16 495 aa28.09■■■□□ 2.09
LSM7-205ENST00000589532 STARD7Q9NQZ5 370 aa28.09■■■□□ 2.09
LSM7-205ENST00000589532 ISY1Q9ULR0 285 aaKnown RBP28.09■■■□□ 2.09
LSM7-205ENST00000589532 FAAP100Q0VG06 881 aa28.08■■■□□ 2.09
LSM7-205ENST00000589532 IKQ13123 557 aaPredicted RBP28.08■■■□□ 2.09
LSM7-205ENST00000589532 MUM1L1Q5H9M0 696 aa28.08■■■□□ 2.09
LSM7-205ENST00000589532 BTNL9Q6UXG8 535 aa28.08■■■□□ 2.09
LSM7-205ENST00000589532 GUCD1Q96NT3 240 aa28.08■■■□□ 2.09
LSM7-205ENST00000589532 TRERF1Q96PN7 1200 aa28.08■■■□□ 2.09
LSM7-205ENST00000589532 RANBP17Q9H2T7 1088 aaKnown RBP28.08■■■□□ 2.09
LSM7-205ENST00000589532 TCP11L1Q9NUJ3 509 aa28.08■■■□□ 2.09
LSM7-205ENST00000589532 CCDC171Q6TFL3 1326 aa28.08■■■□□ 2.09
LSM7-205ENST00000589532 IGHDP01880 384 aa28.07■■■□□ 2.08
LSM7-205ENST00000589532 EPHB4P54760 987 aa28.07■■■□□ 2.08
LSM7-205ENST00000589532 SNAP25P60880 206 aa28.07■■■□□ 2.08
LSM7-205ENST00000589532 NUP133Q8WUM0 1156 aa28.07■■■□□ 2.08
LSM7-205ENST00000589532 ALAS1P13196 640 aa28.06■■■□□ 2.08
LSM7-205ENST00000589532 CCDC174Q6PII3 467 aa28.06■■■□□ 2.08
LSM7-205ENST00000589532 TMEM47Q9BQJ4 181 aa28.06■■■□□ 2.08
LSM7-205ENST00000589532 OSBPL3Q9H4L5 887 aa28.06■■■□□ 2.08
LSM7-205ENST00000589532 CYP39A1Q9NYL5 469 aa28.06■■■□□ 2.08
LSM7-205ENST00000589532 TBX21Q9UL17 535 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms