RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 CPXCR1Q8N123 301 aa12.48□□□□□ -0.41
CLPTM1-211ENST00000589347 MAML3Q96JK9 1138 aa12.48□□□□□ -0.41
CLPTM1-211ENST00000589347 TCP11L1Q9NUJ3 509 aa12.48□□□□□ -0.41
CLPTM1-211ENST00000589347 DDX20Q9UHI6 824 aaKnown RBP12.48□□□□□ -0.41
CLPTM1-211ENST00000589347 NRBP1Q9UHY1 535 aa12.48□□□□□ -0.41
CLPTM1-211ENST00000589347 DIS3Q9Y2L1 958 aaKnown RBP12.48□□□□□ -0.41
CLPTM1-211ENST00000589347 CYBAP13498 195 aa12.47□□□□□ -0.41
CLPTM1-211ENST00000589347 MCCP23508 829 aa12.47□□□□□ -0.41
CLPTM1-211ENST00000589347 PDE4AP27815 886 aa12.47□□□□□ -0.41
CLPTM1-211ENST00000589347 CYP2C19P33261 490 aa12.47□□□□□ -0.41
CLPTM1-211ENST00000589347 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
CLPTM1-211ENST00000589347 TKFCQ3LXA3 575 aa12.47□□□□□ -0.41
CLPTM1-211ENST00000589347 RCSD1Q6JBY9 416 aa12.47□□□□□ -0.41
CLPTM1-211ENST00000589347 TBC1D10CQ8IV04 446 aa12.47□□□□□ -0.41
CLPTM1-211ENST00000589347 CHST13Q8NET6 341 aa12.47□□□□□ -0.41
CLPTM1-211ENST00000589347 MAFAQ8NHW3 353 aaPredicted RBP12.47□□□□□ -0.41
CLPTM1-211ENST00000589347 DDX11Q96FC9 970 aa12.47□□□□□ -0.41
CLPTM1-211ENST00000589347 CNNM2Q9H8M5 875 aa12.47□□□□□ -0.41
CLPTM1-211ENST00000589347 MTMR7Q9Y216 660 aa12.47□□□□□ -0.41
CLPTM1-211ENST00000589347 LTBP2Q14767 1821 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 NEDD4P46934 1319 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 SEPT4O43236 478 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 NMT2O60551 498 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 COBLO75128 1261 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 GSPT1P15170 499 aaKnown RBP12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 NOVP48745 357 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 ZNF697Q5TEC3 545 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 KCTD1Q719H9 257 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 ANKRD35Q8N283 1001 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 MSL3Q8N5Y2 521 aaKnown RBP12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 FAM161BQ96MY7 647 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 TTC14Q96N46 770 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 KRT23Q9C075 422 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 ACAD9Q9H845 621 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 RAVER2Q9HCJ3 691 aaKnown RBP12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 IL17RBQ9NRM6 502 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 PNMA2Q9UL42 364 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 CNPY2Q9Y2B0 182 aa12.46□□□□□ -0.41
CLPTM1-211ENST00000589347 NCOR1O75376 2440 aa12.46□□□□□ -0.42
CLPTM1-211ENST00000589347 SYNGAP1Q96PV0 1343 aa12.45□□□□□ -0.42
CLPTM1-211ENST00000589347 KBTBD13C9JR72 458 aa12.45□□□□□ -0.42
CLPTM1-211ENST00000589347 MDM2Q00987 491 aaPredicted RBP12.45□□□□□ -0.42
CLPTM1-211ENST00000589347 ZNF792Q3KQV3 632 aa12.45□□□□□ -0.42
CLPTM1-211ENST00000589347 SYMPKQ92797 1274 aaKnown RBP12.45□□□□□ -0.42
CLPTM1-211ENST00000589347 CDX2Q99626 313 aaPredicted RBP12.45□□□□□ -0.42
CLPTM1-211ENST00000589347 TMEM47Q9BQJ4 181 aa12.45□□□□□ -0.42
CLPTM1-211ENST00000589347 TINF2Q9BSI4 451 aa12.45□□□□□ -0.42
CLPTM1-211ENST00000589347 INCENPQ9NQS7 918 aa12.45□□□□□ -0.42
CLPTM1-211ENST00000589347 DNM1LO00429 736 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 PGK2P07205 417 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 RARBP10826 455 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 AKR1A1P14550 325 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 PLA2G5P39877 138 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 TRDNQ13061 729 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 LRRC26Q2I0M4 334 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 SYDE2Q5VT97 1194 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 LHX8Q68G74 356 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 CCDC174Q6PII3 467 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 CENPQQ7L2Z9 268 aaPredicted RBP12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 ARRDC4Q8NCT1 418 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 UBAC1Q9BSL1 405 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 KAT14Q9H8E8 782 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 HOMER2Q9NSB8 354 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 RNF146Q9NTX7 359 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 CCPG1Q9ULG6 757 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 PRR12Q9ULL5 1215 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 TACC3Q9Y6A5 838 aa12.44□□□□□ -0.42
CLPTM1-211ENST00000589347 KIAA1217Q5T5P2 1943 aa12.43□□□□□ -0.42
CLPTM1-211ENST00000589347 KDM4AO75164 1064 aa12.43□□□□□ -0.42
CLPTM1-211ENST00000589347 IGHA2P01877 340 aa12.43□□□□□ -0.42
CLPTM1-211ENST00000589347 GPATCH4Q5T3I0 446 aaKnown RBP12.43□□□□□ -0.42
CLPTM1-211ENST00000589347 DGKHQ86XP1 1220 aa12.43□□□□□ -0.42
CLPTM1-211ENST00000589347 TRPV1Q8NER1 839 aa12.43□□□□□ -0.42
CLPTM1-211ENST00000589347 CHMP4CQ96CF2 233 aa12.43□□□□□ -0.42
CLPTM1-211ENST00000589347 RANBP17Q9H2T7 1088 aaKnown RBP12.43□□□□□ -0.42
CLPTM1-211ENST00000589347 U3KPZ7 1027 aaPredicted RBP12.43□□□□□ -0.42
CLPTM1-211ENST00000589347 FRMPD2Q68DX3 1309 aaPredicted RBP12.42□□□□□ -0.42
CLPTM1-211ENST00000589347 B4E1Z4 1266 aa12.42□□□□□ -0.42
CLPTM1-211ENST00000589347 PDHBP11177 359 aa12.42□□□□□ -0.42
CLPTM1-211ENST00000589347 ALAS1P13196 640 aa12.42□□□□□ -0.42
CLPTM1-211ENST00000589347 CHMLP26374 656 aa12.42□□□□□ -0.42
CLPTM1-211ENST00000589347 BTNL9Q6UXG8 535 aa12.42□□□□□ -0.42
CLPTM1-211ENST00000589347 PNMA1Q8ND90 353 aa12.42□□□□□ -0.42
CLPTM1-211ENST00000589347 ZHX1Q9UKY1 873 aaPredicted RBP12.42□□□□□ -0.42
CLPTM1-211ENST00000589347 RIPK3Q9Y572 518 aa12.42□□□□□ -0.42
CLPTM1-211ENST00000589347 TNKSO95271 1327 aa12.41□□□□□ -0.42
CLPTM1-211ENST00000589347 DNAJC25-GNG10A0A024R161 153 aa12.41□□□□□ -0.42
CLPTM1-211ENST00000589347 ERICH2A1L162 156 aa12.41□□□□□ -0.42
CLPTM1-211ENST00000589347 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
CLPTM1-211ENST00000589347 ICAM1P05362 532 aa12.41□□□□□ -0.42
CLPTM1-211ENST00000589347 ASPRV1Q53RT3 343 aa12.41□□□□□ -0.42
CLPTM1-211ENST00000589347 MAMDC4Q6UXC1 1216 aa12.41□□□□□ -0.42
CLPTM1-211ENST00000589347 RASGRP2Q7LDG7 609 aa12.41□□□□□ -0.42
CLPTM1-211ENST00000589347 RALYLQ86SE5 291 aaKnown RBP12.41□□□□□ -0.42
CLPTM1-211ENST00000589347 RNF180Q86T96 592 aa12.41□□□□□ -0.42
CLPTM1-211ENST00000589347 AGBL1Q96MI9 1066 aa12.41□□□□□ -0.42
CLPTM1-211ENST00000589347 TRERF1Q96PN7 1200 aa12.41□□□□□ -0.42
CLPTM1-211ENST00000589347 ZSCAN10Q96SZ4 725 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms