RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 GPATCH4Q5T3I0 446 aaKnown RBP16.51■□□□□ 0.23
CLPTM1-210ENST00000589158 CHST3Q7LGC8 479 aa16.51■□□□□ 0.23
CLPTM1-210ENST00000589158 RNF146Q9NTX7 359 aa16.51■□□□□ 0.23
CLPTM1-210ENST00000589158 CCPG1Q9ULG6 757 aa16.51■□□□□ 0.23
CLPTM1-210ENST00000589158 LAMA4Q16363 1823 aa16.51■□□□□ 0.23
CLPTM1-210ENST00000589158 SART3Q15020 963 aaKnown RBP16.5■□□□□ 0.23
CLPTM1-210ENST00000589158 SEC23AQ15436 765 aa16.5■□□□□ 0.23
CLPTM1-210ENST00000589158 ZNF792Q3KQV3 632 aa16.5■□□□□ 0.23
CLPTM1-210ENST00000589158 TKFCQ3LXA3 575 aa16.5■□□□□ 0.23
CLPTM1-210ENST00000589158 CREB3L3Q68CJ9 461 aa16.5■□□□□ 0.23
CLPTM1-210ENST00000589158 TRERF1Q96PN7 1200 aa16.5■□□□□ 0.23
CLPTM1-210ENST00000589158 UBA5Q9GZZ9 404 aa16.5■□□□□ 0.23
CLPTM1-210ENST00000589158 CRISPLD2Q9H0B8 497 aa16.5■□□□□ 0.23
CLPTM1-210ENST00000589158 RANBP17Q9H2T7 1088 aaKnown RBP16.5■□□□□ 0.23
CLPTM1-210ENST00000589158 ACAD9Q9H845 621 aa16.5■□□□□ 0.23
CLPTM1-210ENST00000589158 FARP2O94887 1054 aaPredicted RBP16.49■□□□□ 0.23
CLPTM1-210ENST00000589158 ICAM1P05362 532 aa16.49■□□□□ 0.23
CLPTM1-210ENST00000589158 PARP1P09874 1014 aaKnown RBP16.49■□□□□ 0.23
CLPTM1-210ENST00000589158 CAPN2P17655 700 aa16.49■□□□□ 0.23
CLPTM1-210ENST00000589158 WTAPQ15007 396 aa16.49■□□□□ 0.23
CLPTM1-210ENST00000589158 NECTIN1Q15223 517 aa16.49■□□□□ 0.23
CLPTM1-210ENST00000589158 PRAMEF19Q5SWL8 479 aa16.49■□□□□ 0.23
CLPTM1-210ENST00000589158 CPVLQ9H3G5 476 aa16.49■□□□□ 0.23
CLPTM1-210ENST00000589158 DIS3Q9Y2L1 958 aaKnown RBP16.49■□□□□ 0.23
CLPTM1-210ENST00000589158 PARP14Q460N5 1801 aa16.49■□□□□ 0.23
CLPTM1-210ENST00000589158 DHX16O60231 1041 aaKnown RBP16.48■□□□□ 0.23
CLPTM1-210ENST00000589158 IGHA2P01877 340 aa16.48■□□□□ 0.23
CLPTM1-210ENST00000589158 TAL1P17542 331 aaPredicted RBP16.48■□□□□ 0.23
CLPTM1-210ENST00000589158 ASPRV1Q53RT3 343 aa16.48■□□□□ 0.23
CLPTM1-210ENST00000589158 TMEM67Q5HYA8 995 aa16.48■□□□□ 0.23
CLPTM1-210ENST00000589158 RNF20Q5VTR2 975 aa16.48■□□□□ 0.23
CLPTM1-210ENST00000589158 MB21D2Q8IYB1 491 aaPredicted RBP16.48■□□□□ 0.23
CLPTM1-210ENST00000589158 TRPV1Q8NER1 839 aa16.48■□□□□ 0.23
CLPTM1-210ENST00000589158 TINF2Q9BSI4 451 aa16.48■□□□□ 0.23
CLPTM1-210ENST00000589158 RBBP6Q7Z6E9 1792 aaKnown RBP16.48■□□□□ 0.23
CLPTM1-210ENST00000589158 DOCK3Q8IZD9 2030 aa16.48■□□□□ 0.23
CLPTM1-210ENST00000589158 BRCA2P51587 3418 aa16.48■□□□□ 0.23
CLPTM1-210ENST00000589158 DNAJC25-GNG10A0A024R161 153 aa16.47■□□□□ 0.23
CLPTM1-210ENST00000589158 POTEB2H3BUK9 544 aa16.47■□□□□ 0.23
CLPTM1-210ENST00000589158 CYBAP13498 195 aa16.47■□□□□ 0.23
CLPTM1-210ENST00000589158 ANTXR2P58335 489 aa16.47■□□□□ 0.23
CLPTM1-210ENST00000589158 MUM1L1Q5H9M0 696 aa16.47■□□□□ 0.23
CLPTM1-210ENST00000589158 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLPTM1-210ENST00000589158 VAT1LQ9HCJ6 419 aa16.47■□□□□ 0.23
CLPTM1-210ENST00000589158 DDX20Q9UHI6 824 aaKnown RBP16.47■□□□□ 0.23
CLPTM1-210ENST00000589158 ZNF236Q9UL36 1845 aa16.47■□□□□ 0.23
CLPTM1-210ENST00000589158 PRC1O43663 620 aa16.46■□□□□ 0.23
CLPTM1-210ENST00000589158 MCM5P33992 734 aa16.46■□□□□ 0.23
CLPTM1-210ENST00000589158 LHX8Q68G74 356 aa16.46■□□□□ 0.23
CLPTM1-210ENST00000589158 NSMFQ6X4W1 530 aa16.46■□□□□ 0.23
CLPTM1-210ENST00000589158 ADGRF4Q8IZF3 695 aa16.46■□□□□ 0.23
CLPTM1-210ENST00000589158 ANKLE1Q8NAG6 615 aa16.46■□□□□ 0.23
CLPTM1-210ENST00000589158 SENP2Q9HC62 589 aa16.46■□□□□ 0.23
CLPTM1-210ENST00000589158 A1CFQ9NQ94 594 aaKnown RBP16.46■□□□□ 0.23
CLPTM1-210ENST00000589158 PNMA2Q9UL42 364 aa16.46■□□□□ 0.23
CLPTM1-210ENST00000589158 OGDHLQ9ULD0 1010 aa16.46■□□□□ 0.23
CLPTM1-210ENST00000589158 CNPY2Q9Y2B0 182 aa16.46■□□□□ 0.23
CLPTM1-210ENST00000589158 COL11A1P12107 1806 aaPredicted RBP16.46■□□□□ 0.23
CLPTM1-210ENST00000589158 PFASO15067 1338 aa16.45■□□□□ 0.22
CLPTM1-210ENST00000589158 MSCO60682 206 aa16.45■□□□□ 0.22
CLPTM1-210ENST00000589158 CNTN2Q02246 1040 aa16.45■□□□□ 0.22
CLPTM1-210ENST00000589158 ANO1Q5XXA6 986 aa16.45■□□□□ 0.22
CLPTM1-210ENST00000589158 UBE2Q1Q7Z7E8 422 aa16.45■□□□□ 0.22
CLPTM1-210ENST00000589158 CATIPQ7Z7H3 387 aa16.45■□□□□ 0.22
CLPTM1-210ENST00000589158 STAG2Q8N3U4 1231 aa16.45■□□□□ 0.22
CLPTM1-210ENST00000589158 IGDCC4Q8TDY8 1250 aa16.45■□□□□ 0.22
CLPTM1-210ENST00000589158 PAWRQ96IZ0 340 aaKnown RBP16.45■□□□□ 0.22
CLPTM1-210ENST00000589158 KLRF2D3W0D1 207 aa16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 TNRC18O15417 2968 aaPredicted RBP16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 SEPT4O43236 478 aa16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 CDC37Q16543 378 aaPredicted RBP16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 USH1GQ495M9 461 aa16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 NFXL1Q6ZNB6 911 aa16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 NECAB2Q7Z6G3 386 aa16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 ZNF467Q7Z7K2 595 aaPredicted RBP16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 MSL3Q8N5Y2 521 aaKnown RBP16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 DIS3LQ8TF46 1054 aaKnown RBP16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 DPF3Q92784 378 aa16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 HTATIP2Q9BUP3 242 aa16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 GPHNQ9NQX3 736 aaPredicted RBP16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 CYP39A1Q9NYL5 469 aa16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 NRBP1Q9UHY1 535 aa16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 MAD2L2Q9UI95 211 aa16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 WDR19Q8NEZ3 1342 aa16.44■□□□□ 0.22
CLPTM1-210ENST00000589158 KIAA0100Q14667 2235 aaKnown RBP16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 PTPDC1A2A3K4 754 aa16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 NFIBO00712 420 aa16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 MYCNP04198 464 aaPredicted RBP16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 BAATQ14032 418 aaPredicted RBP16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 GRM4Q14833 912 aa16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 MAMDC4Q6UXC1 1216 aa16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 FAM133AQ8N9E0 248 aa16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 NUP133Q8WUM0 1156 aa16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 TMEM87BQ96K49 555 aa16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 JMJD4Q9H9V9 463 aa16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 LY9Q9HBG7 655 aa16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 ZHX1Q9UKY1 873 aaPredicted RBP16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 SYNGAP1Q96PV0 1343 aa16.43■□□□□ 0.22
CLPTM1-210ENST00000589158 PALM3A6NDB9 673 aaPredicted RBP16.42■□□□□ 0.22
CLPTM1-210ENST00000589158 SOWAHBA6NEL2 793 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms