RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 ADCY3O60266 1144 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 COBLO75128 1261 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 HOXD10P28358 340 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 PRMT2P55345 433 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 GRB14Q14449 540 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 MTFR1Q15390 333 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 CLEC17AQ6ZS10 378 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 NBPF11Q86T75 865 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 NPLOC4Q8TAT6 608 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 TRIB2Q92519 343 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 ARMC5Q96C12 935 aa20.46■□□□□ 0.87
DNMT1-215ENST00000588913 RANBP17Q9H2T7 1088 aaKnown RBP20.46■□□□□ 0.87
DNMT1-215ENST00000588913 BAZ2BQ9UIF8 2168 aaKnown RBP20.45■□□□□ 0.86
DNMT1-215ENST00000588913 PLXNA1Q9UIW2 1896 aa20.45■□□□□ 0.86
DNMT1-215ENST00000588913 ATP2A1O14983 1001 aa20.45■□□□□ 0.86
DNMT1-215ENST00000588913 ZBED4O75132 1171 aa20.45■□□□□ 0.86
DNMT1-215ENST00000588913 HSP90AA1P07900 732 aaKnown RBP20.45■□□□□ 0.86
DNMT1-215ENST00000588913 RXRAP19793 462 aa20.45■□□□□ 0.86
DNMT1-215ENST00000588913 IRF5Q13568 498 aa20.45■□□□□ 0.86
DNMT1-215ENST00000588913 ZNF333Q96JL9 665 aa20.45■□□□□ 0.86
DNMT1-215ENST00000588913 JAKMIP1Q96N16 626 aaKnown RBP20.45■□□□□ 0.86
DNMT1-215ENST00000588913 TEX13BQ9BXU2 312 aa20.45■□□□□ 0.86
DNMT1-215ENST00000588913 CCDC85CA6NKD9 419 aa20.44■□□□□ 0.86
DNMT1-215ENST00000588913 XRCC6P12956 609 aaKnown RBP eCLIP20.44■□□□□ 0.86
DNMT1-215ENST00000588913 GRK4P32298 578 aa20.44■□□□□ 0.86
DNMT1-215ENST00000588913 RABEP1Q15276 862 aa20.44■□□□□ 0.86
DNMT1-215ENST00000588913 SLC9C1Q4G0N8 1177 aa20.44■□□□□ 0.86
DNMT1-215ENST00000588913 PALM3A6NDB9 673 aaPredicted RBP20.44■□□□□ 0.86
DNMT1-215ENST00000588913 PGK2P07205 417 aa20.44■□□□□ 0.86
DNMT1-215ENST00000588913 ADORA2AP29274 412 aa20.44■□□□□ 0.86
DNMT1-215ENST00000588913 GRM4Q14833 912 aa20.44■□□□□ 0.86
DNMT1-215ENST00000588913 CCAR1Q8IX12 1150 aaKnown RBP20.44■□□□□ 0.86
DNMT1-215ENST00000588913 ZNF654Q8IZM8 581 aa20.44■□□□□ 0.86
DNMT1-215ENST00000588913 SPRYD3Q8NCJ5 442 aa20.44■□□□□ 0.86
DNMT1-215ENST00000588913 NUDT12Q9BQG2 462 aa20.44■□□□□ 0.86
DNMT1-215ENST00000588913 HOMER2Q9NSB8 354 aa20.44■□□□□ 0.86
DNMT1-215ENST00000588913 MKI67P46013 3256 aaKnown RBP20.43■□□□□ 0.86
DNMT1-215ENST00000588913 MYH6P13533 1939 aa20.43■□□□□ 0.86
DNMT1-215ENST00000588913 SLC15A5A6NIM6 579 aa20.43■□□□□ 0.86
DNMT1-215ENST00000588913 PARP1P09874 1014 aaKnown RBP20.43■□□□□ 0.86
DNMT1-215ENST00000588913 MAP2K5Q13163 448 aa20.43■□□□□ 0.86
DNMT1-215ENST00000588913 MUM1L1Q5H9M0 696 aa20.43■□□□□ 0.86
DNMT1-215ENST00000588913 DHX32Q7L7V1 743 aaKnown RBP20.43■□□□□ 0.86
DNMT1-215ENST00000588913 MROH8Q9H579 483 aa20.43■□□□□ 0.86
DNMT1-215ENST00000588913 SLC25A27O95847 323 aa20.42■□□□□ 0.86
DNMT1-215ENST00000588913 ZKSCAN1P17029 563 aaPredicted RBP20.42■□□□□ 0.86
DNMT1-215ENST00000588913 ASPRV1Q53RT3 343 aa20.42■□□□□ 0.86
DNMT1-215ENST00000588913 ADGRF4Q8IZF3 695 aa20.42■□□□□ 0.86
DNMT1-215ENST00000588913 TMEM87BQ96K49 555 aa20.42■□□□□ 0.86
DNMT1-215ENST00000588913 JMJD4Q9H9V9 463 aa20.42■□□□□ 0.86
DNMT1-215ENST00000588913 ERICH2A1L162 156 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 CYTH3O43739 400 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 IGHA2P01877 340 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 INHAP05111 366 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 SOX10P56693 466 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 GPATCH4Q5T3I0 446 aaKnown RBP20.41■□□□□ 0.86
DNMT1-215ENST00000588913 SOCS4Q8WXH5 440 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 TNPO1Q92973 898 aaKnown RBP20.41■□□□□ 0.86
DNMT1-215ENST00000588913 CWC22Q9HCG8 908 aaKnown RBP20.41■□□□□ 0.86
DNMT1-215ENST00000588913 POTEFA5A3E0 1075 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 LIFRP42702 1097 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 OAZ1P54368 228 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 SART3Q15020 963 aaKnown RBP20.41■□□□□ 0.86
DNMT1-215ENST00000588913 CCDC144CPQ8IYA2 1237 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 NUP133Q8WUM0 1156 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 FGD4Q96M96 766 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 KIF2CQ99661 725 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 MTA3Q9BTC8 594 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 VAT1LQ9HCJ6 419 aa20.41■□□□□ 0.86
DNMT1-215ENST00000588913 RBBP6Q7Z6E9 1792 aaKnown RBP20.41■□□□□ 0.86
DNMT1-215ENST00000588913 KLRF2D3W0D1 207 aa20.4■□□□□ 0.86
DNMT1-215ENST00000588913 PPP1R11O60927 126 aaPredicted RBP20.4■□□□□ 0.86
DNMT1-215ENST00000588913 ALAS1P13196 640 aa20.4■□□□□ 0.86
DNMT1-215ENST00000588913 RGS2P41220 211 aa20.4■□□□□ 0.86
DNMT1-215ENST00000588913 KRT32Q14532 448 aa20.4■□□□□ 0.86
DNMT1-215ENST00000588913 CMTR1Q8N1G2 835 aaKnown RBP20.4■□□□□ 0.86
DNMT1-215ENST00000588913 SLAIN1Q8ND83 568 aa20.4■□□□□ 0.86
DNMT1-215ENST00000588913 PXYLP1Q8TE99 480 aa20.4■□□□□ 0.86
DNMT1-215ENST00000588913 MMP19Q99542 508 aa20.4■□□□□ 0.86
DNMT1-215ENST00000588913 APBA2Q99767 749 aa20.4■□□□□ 0.86
DNMT1-215ENST00000588913 RNF146Q9NTX7 359 aa20.4■□□□□ 0.86
DNMT1-215ENST00000588913 IVNS1ABPQ9Y6Y0 642 aa20.4■□□□□ 0.86
DNMT1-215ENST00000588913 EPB41L2O43491 1005 aaKnown RBP20.39■□□□□ 0.86
DNMT1-215ENST00000588913 PLEKHA8P1O95397 391 aa20.39■□□□□ 0.86
DNMT1-215ENST00000588913 ICAM1P05362 532 aa20.39■□□□□ 0.86
DNMT1-215ENST00000588913 HOXC6P09630 235 aa20.39■□□□□ 0.86
DNMT1-215ENST00000588913 RPS6KB1P23443 525 aa20.39■□□□□ 0.86
DNMT1-215ENST00000588913 SGMS1Q86VZ5 419 aa20.39■□□□□ 0.86
DNMT1-215ENST00000588913 PURBQ96QR8 312 aaKnown RBP20.39■□□□□ 0.86
DNMT1-215ENST00000588913 UNC93B1Q9H1C4 597 aa20.39■□□□□ 0.86
DNMT1-215ENST00000588913 CCPG1Q9ULG6 757 aa20.39■□□□□ 0.86
DNMT1-215ENST00000588913 CTDP1Q9Y5B0 961 aaPredicted RBP20.39■□□□□ 0.86
DNMT1-215ENST00000588913 DDX49Q9Y6V7 483 aaKnown RBP20.39■□□□□ 0.86
DNMT1-215ENST00000588913 KIAA0100Q14667 2235 aaKnown RBP20.39■□□□□ 0.85
DNMT1-215ENST00000588913 WDR19Q8NEZ3 1342 aa20.39■□□□□ 0.85
DNMT1-215ENST00000588913 FDX1P10109 184 aa20.39■□□□□ 0.85
DNMT1-215ENST00000588913 XRCC5P13010 732 aaKnown RBP20.39■□□□□ 0.85
DNMT1-215ENST00000588913 CASTP20810 708 aaKnown RBP20.39■□□□□ 0.85
DNMT1-215ENST00000588913 NUCB2P80303 420 aa20.39■□□□□ 0.85
DNMT1-215ENST00000588913 CDC37Q16543 378 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms