RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 CCDC12Q8WUD4 166 aaPredicted RBP16.69■□□□□ 0.26
NPC1-207ENST00000588867 AMNQ9BXJ7 453 aa16.69■□□□□ 0.26
NPC1-207ENST00000588867 PPP1R9AQ9ULJ8 1098 aa16.69■□□□□ 0.26
NPC1-207ENST00000588867 PCDHA1Q9Y5I3 950 aa16.69■□□□□ 0.26
NPC1-207ENST00000588867 SMCO2A6NFE2 343 aa16.69■□□□□ 0.26
NPC1-207ENST00000588867 BTBD18B2RXH4 712 aa16.69■□□□□ 0.26
NPC1-207ENST00000588867 hCG_1984214I3L0E3 225 aa16.69■□□□□ 0.26
NPC1-207ENST00000588867 FASTKD5Q7L8L6 764 aaKnown RBP16.69■□□□□ 0.26
NPC1-207ENST00000588867 DIS3L2Q8IYB7 885 aaKnown RBP16.69■□□□□ 0.26
NPC1-207ENST00000588867 ZNF713Q8N859 430 aaPredicted RBP16.69■□□□□ 0.26
NPC1-207ENST00000588867 RANBP17Q9H2T7 1088 aaKnown RBP16.69■□□□□ 0.26
NPC1-207ENST00000588867 ZSCAN16Q9H4T2 348 aaPredicted RBP16.69■□□□□ 0.26
NPC1-207ENST00000588867 ABT1Q9ULW3 272 aaKnown RBP16.69■□□□□ 0.26
NPC1-207ENST00000588867 KIF23Q02241 960 aaPredicted RBP16.68■□□□□ 0.26
NPC1-207ENST00000588867 RESTQ13127 1097 aa16.68■□□□□ 0.26
NPC1-207ENST00000588867 SPRYD7Q5W111 196 aa16.68■□□□□ 0.26
NPC1-207ENST00000588867 FAM173BQ6P4H8 233 aa16.68■□□□□ 0.26
NPC1-207ENST00000588867 OXER1Q8TDS5 423 aa16.68■□□□□ 0.26
NPC1-207ENST00000588867 BRMS1Q9HCU9 246 aa16.68■□□□□ 0.26
NPC1-207ENST00000588867 ATP6V1DQ9Y5K8 247 aa16.68■□□□□ 0.26
NPC1-207ENST00000588867 KIF28PB7ZC32 967 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 ZBED4O75132 1171 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 CALML3P27482 149 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 KRT2P35908 639 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 GTF2A2P52657 109 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 CPXCR1Q8N123 301 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 ATG4CQ96DT6 458 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 CHAMP1Q96JM3 812 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 C6orf50Q9HD87 102 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 HOXC10Q9NYD6 342 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 CETPP11597 493 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 DSG3P32926 999 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 NR5A1Q13285 461 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 RGMBQ6NW40 437 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 AGTPBP1Q9UPW5 1226 aa16.67■□□□□ 0.26
NPC1-207ENST00000588867 TMEM88BA6NKF7 163 aa16.66■□□□□ 0.26
NPC1-207ENST00000588867 VWA5AO00534 786 aa16.66■□□□□ 0.26
NPC1-207ENST00000588867 ZBTB48P10074 688 aaPredicted RBP16.66■□□□□ 0.26
NPC1-207ENST00000588867 TAL1P17542 331 aaPredicted RBP16.66■□□□□ 0.26
NPC1-207ENST00000588867 GNA11P29992 359 aa16.66■□□□□ 0.26
NPC1-207ENST00000588867 IRX3P78415 501 aaPredicted RBP16.66■□□□□ 0.26
NPC1-207ENST00000588867 FSTL1Q12841 308 aa16.66■□□□□ 0.26
NPC1-207ENST00000588867 MOGSQ13724 837 aa16.66■□□□□ 0.26
NPC1-207ENST00000588867 BLIDQ8IZY5 108 aa16.66■□□□□ 0.26
NPC1-207ENST00000588867 ZMYND12Q9H0C1 365 aa16.66■□□□□ 0.26
NPC1-207ENST00000588867 SLC38A10Q9HBR0 1119 aa16.66■□□□□ 0.26
NPC1-207ENST00000588867 PCDHA4Q9UN74 947 aa16.66■□□□□ 0.26
NPC1-207ENST00000588867 TLL2Q9Y6L7 1015 aa16.66■□□□□ 0.26
NPC1-207ENST00000588867 CCL15-CCL14A0A0B4J2E2 113 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 HOXA7P31268 230 aaPredicted RBP16.65■□□□□ 0.26
NPC1-207ENST00000588867 NPY5RQ15761 445 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 CCL15Q16663 113 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 MS4A4AQ96JQ5 239 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 AGBL1Q96MI9 1066 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 FOXP1Q9H334 677 aaPredicted RBP16.65■□□□□ 0.26
NPC1-207ENST00000588867 RAVER2Q9HCJ3 691 aaKnown RBP16.65■□□□□ 0.26
NPC1-207ENST00000588867 LOC285556D6RIA3 1793 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 ADAMTS3O15072 1205 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 FDX1P10109 184 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 NCLP19338 710 aaKnown RBP16.65■□□□□ 0.26
NPC1-207ENST00000588867 U2AF2P26368 475 aaKnown RBP eCLIP16.65■□□□□ 0.26
NPC1-207ENST00000588867 ADCY7P51828 1080 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 TRAF1Q13077 416 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 PABPC4Q13310 644 aaKnown RBP eCLIP16.65■□□□□ 0.26
NPC1-207ENST00000588867 GALNT17Q6IS24 598 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 PPP1R18Q6NYC8 613 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 BRAPQ7Z569 592 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 FAM177A1Q8N128 213 aaPredicted RBP16.65■□□□□ 0.26
NPC1-207ENST00000588867 CCPG1Q9ULG6 757 aa16.65■□□□□ 0.26
NPC1-207ENST00000588867 BAG4O95429 457 aaKnown RBP16.64■□□□□ 0.25
NPC1-207ENST00000588867 ICAM1P05362 532 aa16.64■□□□□ 0.25
NPC1-207ENST00000588867 DNM1Q05193 864 aaKnown RBP16.64■□□□□ 0.25
NPC1-207ENST00000588867 GPAT2Q6NUI2 795 aa16.64■□□□□ 0.25
NPC1-207ENST00000588867 RASAL3Q86YV0 1011 aa16.64■□□□□ 0.25
NPC1-207ENST00000588867 NOSTRINQ8IVI9 506 aa16.64■□□□□ 0.25
NPC1-207ENST00000588867 GBP4Q96PP9 640 aa16.64■□□□□ 0.25
NPC1-207ENST00000588867 P2RX7Q99572 595 aaKnown RBP16.64■□□□□ 0.25
NPC1-207ENST00000588867 ASCC2Q9H1I8 757 aaPredicted RBP16.64■□□□□ 0.25
NPC1-207ENST00000588867 PSTPIP2Q9H939 334 aa16.64■□□□□ 0.25
NPC1-207ENST00000588867 PARP14Q460N5 1801 aa16.64■□□□□ 0.25
NPC1-207ENST00000588867 SMCHD1A6NHR9 2005 aa16.64■□□□□ 0.25
NPC1-207ENST00000588867 ZNF536O15090 1300 aa16.64■□□□□ 0.25
NPC1-207ENST00000588867 RLFQ13129 1914 aa16.64■□□□□ 0.25
NPC1-207ENST00000588867 SPDYE16A6NNV3 312 aaPredicted RBP16.63■□□□□ 0.25
NPC1-207ENST00000588867 OSBPP22059 807 aa16.63■□□□□ 0.25
NPC1-207ENST00000588867 BICD2Q8TD16 824 aa16.63■□□□□ 0.25
NPC1-207ENST00000588867 RASGRP4Q8TDF6 673 aa16.63■□□□□ 0.25
NPC1-207ENST00000588867 TFIP11Q9UBB9 837 aaKnown RBP16.63■□□□□ 0.25
NPC1-207ENST00000588867 ADAMTS5Q9UNA0 930 aa16.63■□□□□ 0.25
NPC1-207ENST00000588867 MYPNQ86TC9 1320 aa16.63■□□□□ 0.25
NPC1-207ENST00000588867 ESYT2A0FGR8 921 aa16.63■□□□□ 0.25
NPC1-207ENST00000588867 MRPL12P52815 198 aaKnown RBP16.63■□□□□ 0.25
NPC1-207ENST00000588867 PLS1Q14651 629 aa16.63■□□□□ 0.25
NPC1-207ENST00000588867 PAXIP1Q6ZW49 1069 aaPredicted RBP16.63■□□□□ 0.25
NPC1-207ENST00000588867 DAGLBQ8NCG7 672 aa16.63■□□□□ 0.25
NPC1-207ENST00000588867 BRI3BPQ8WY22 251 aa16.63■□□□□ 0.25
NPC1-207ENST00000588867 CUL5Q93034 780 aa16.63■□□□□ 0.25
NPC1-207ENST00000588867 RIC8AQ9NPQ8 531 aa16.63■□□□□ 0.25
NPC1-207ENST00000588867 BIN2Q9UBW5 565 aaPredicted RBP16.63■□□□□ 0.25
NPC1-207ENST00000588867 ALAS1P13196 640 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms