RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 ZNFX1Q9P2E3 1918 aaKnown RBP6.93□□□□□ -1.3
CHUK-203ENST00000588656 LAMA2P24043 3122 aaKnown RBP6.93□□□□□ -1.3
CHUK-203ENST00000588656 EYSQ5T1H1 3165 aa6.93□□□□□ -1.3
CHUK-203ENST00000588656 A0A0C4DFX4 3053 aa6.92□□□□□ -1.3
CHUK-203ENST00000588656 A0A0G2JLL6 359 aaPredicted RBP6.92□□□□□ -1.3
CHUK-203ENST00000588656 SGPL1O95470 568 aa6.92□□□□□ -1.3
CHUK-203ENST00000588656 PHKA2P46019 1235 aa6.92□□□□□ -1.3
CHUK-203ENST00000588656 TIMM10P62072 90 aa6.92□□□□□ -1.3
CHUK-203ENST00000588656 RASGRF1Q13972 1273 aa6.92□□□□□ -1.3
CHUK-203ENST00000588656 RRP1BQ14684 758 aaKnown RBP6.92□□□□□ -1.3
CHUK-203ENST00000588656 NOL9Q5SY16 702 aaKnown RBP6.92□□□□□ -1.3
CHUK-203ENST00000588656 TBC1D9Q6ZT07 1266 aa6.92□□□□□ -1.3
CHUK-203ENST00000588656 PRRT2Q7Z6L0 340 aaPredicted RBP6.92□□□□□ -1.3
CHUK-203ENST00000588656 DZIP1Q86YF9 867 aaKnown RBP6.92□□□□□ -1.3
CHUK-203ENST00000588656 PGBD3Q8N328 593 aa6.92□□□□□ -1.3
CHUK-203ENST00000588656 LPIN2Q92539 896 aa6.92□□□□□ -1.3
CHUK-203ENST00000588656 HOOK2Q96ED9 719 aa6.92□□□□□ -1.3
CHUK-203ENST00000588656 TNNQ9UQP3 1299 aa6.92□□□□□ -1.3
CHUK-203ENST00000588656 AFG3L2Q9Y4W6 797 aa6.92□□□□□ -1.3
CHUK-203ENST00000588656 LRRFIP2Q9Y608 721 aaKnown RBP6.92□□□□□ -1.3
CHUK-203ENST00000588656 RFX7Q2KHR2 1363 aa6.92□□□□□ -1.3
CHUK-203ENST00000588656 NAV1Q8NEY1 1877 aa6.92□□□□□ -1.3
CHUK-203ENST00000588656 CUL9Q8IWT3 2517 aa6.91□□□□□ -1.3
CHUK-203ENST00000588656 HMGCS2P54868 508 aa6.91□□□□□ -1.3
CHUK-203ENST00000588656 PRMT2P55345 433 aa6.91□□□□□ -1.3
CHUK-203ENST00000588656 PLA2G4EQ3MJ16 856 aa6.91□□□□□ -1.3
CHUK-203ENST00000588656 FKBP1CQ5VVH2 108 aa6.91□□□□□ -1.3
CHUK-203ENST00000588656 CCDC102BQ68D86 513 aa6.91□□□□□ -1.3
CHUK-203ENST00000588656 ZNF384Q8TF68 577 aa6.91□□□□□ -1.3
CHUK-203ENST00000588656 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.91□□□□□ -1.3
CHUK-203ENST00000588656 PRO3102Q9H379 93 aa6.91□□□□□ -1.3
CHUK-203ENST00000588656 GPAMQ9HCL2 828 aa6.91□□□□□ -1.3
CHUK-203ENST00000588656 ZCCHC17Q9NP64 241 aaKnown RBP6.91□□□□□ -1.3
CHUK-203ENST00000588656 SMC4Q9NTJ3 1288 aa6.91□□□□□ -1.3
CHUK-203ENST00000588656 GDF2Q9UK05 429 aaPredicted RBP6.91□□□□□ -1.3
CHUK-203ENST00000588656 NR2E3Q9Y5X4 410 aa6.91□□□□□ -1.3
CHUK-203ENST00000588656 COL11A1P12107 1806 aaPredicted RBP6.91□□□□□ -1.3
CHUK-203ENST00000588656 LTBP2Q14767 1821 aa6.91□□□□□ -1.3
CHUK-203ENST00000588656 BAZ2AQ9UIF9 1905 aaKnown RBP6.91□□□□□ -1.3
CHUK-203ENST00000588656 SMCHD1A6NHR9 2005 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 CXCL11O14625 94 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 UBTFL1P0CB47 393 aaPredicted RBP6.9□□□□□ -1.3
CHUK-203ENST00000588656 CYP2B6P20813 491 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 MECOMQ03112 1051 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 TFCP2Q12800 502 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 SPP2Q13103 211 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 SLFNL1Q499Z3 407 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 EFHC2Q5JST6 749 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 FAM161BQ96MY7 647 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 NEUROD6Q96NK8 337 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 MEIS3Q99687 375 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.9□□□□□ -1.3
CHUK-203ENST00000588656 DENND2AQ9ULE3 1009 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 SUGT1Q9Y2Z0 365 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 ZNF521Q96K83 1311 aa6.9□□□□□ -1.3
CHUK-203ENST00000588656 PLXNA1Q9UIW2 1896 aa6.9□□□□□ -1.31
CHUK-203ENST00000588656 A0A1B0GUL7 405 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 JAG1P78504 1218 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 ZYXQ15942 572 aaKnown RBP6.89□□□□□ -1.31
CHUK-203ENST00000588656 CCL14Q16627 93 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 C4orf17Q53FE4 359 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 FASTKD5Q7L8L6 764 aaKnown RBP6.89□□□□□ -1.31
CHUK-203ENST00000588656 PHTF2Q8N3S3 785 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 DEFB123Q8N688 67 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 GALNT6Q8NCL4 622 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 TRIB2Q92519 343 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 COA7Q96BR5 231 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 MRIQ9BWK5 157 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 IDI2Q9BXS1 227 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 GNL3LQ9NVN8 582 aaKnown RBP6.89□□□□□ -1.31
CHUK-203ENST00000588656 NOB1Q9ULX3 412 aaKnown RBP6.89□□□□□ -1.31
CHUK-203ENST00000588656 DOLKQ9UPQ8 538 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 AGTPBP1Q9UPW5 1226 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 MROH7-TTC4A0A0A0MT08 1334 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 GAKO14976 1311 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 PTPRCP08575 1304 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 KIF16BQ96L93 1317 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 PARP14Q460N5 1801 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 RLFQ13129 1914 aa6.89□□□□□ -1.31
CHUK-203ENST00000588656 SALL1Q9NSC2 1324 aa6.88□□□□□ -1.31
CHUK-203ENST00000588656 ENTPD3O75355 529 aa6.88□□□□□ -1.31
CHUK-203ENST00000588656 THBS1P07996 1170 aa6.88□□□□□ -1.31
CHUK-203ENST00000588656 MSX1P28360 303 aa6.88□□□□□ -1.31
CHUK-203ENST00000588656 CCND3P30281 292 aaPredicted RBP6.88□□□□□ -1.31
CHUK-203ENST00000588656 MAGEA10P43363 369 aaPredicted RBP6.88□□□□□ -1.31
CHUK-203ENST00000588656 RHBDL3P58872 404 aa6.88□□□□□ -1.31
CHUK-203ENST00000588656 NECAB2Q7Z6G3 386 aa6.88□□□□□ -1.31
CHUK-203ENST00000588656 ALYREFQ86V81 257 aaKnown RBP6.88□□□□□ -1.31
CHUK-203ENST00000588656 MAPKAPK5Q8IW41 473 aa6.88□□□□□ -1.31
CHUK-203ENST00000588656 GOLGA6L1Q8N7Z2 621 aa6.88□□□□□ -1.31
CHUK-203ENST00000588656 RHBDD1Q8TEB9 315 aa6.88□□□□□ -1.31
CHUK-203ENST00000588656 SH3RF3Q8TEJ3 882 aaPredicted RBP6.88□□□□□ -1.31
CHUK-203ENST00000588656 SPOCK3Q9BQ16 436 aa6.88□□□□□ -1.31
CHUK-203ENST00000588656 PAGR1Q9BTK6 254 aa6.88□□□□□ -1.31
CHUK-203ENST00000588656 ASCC2Q9H1I8 757 aaPredicted RBP6.88□□□□□ -1.31
CHUK-203ENST00000588656 TXNRD2Q9NNW7 524 aa6.88□□□□□ -1.31
CHUK-203ENST00000588656 PAK6Q9NQU5 681 aaPredicted RBP6.88□□□□□ -1.31
CHUK-203ENST00000588656 AATFQ9NY61 560 aaKnown RBP eCLIP6.88□□□□□ -1.31
CHUK-203ENST00000588656 RAI14Q9P0K7 980 aa6.88□□□□□ -1.31
CHUK-203ENST00000588656 SAP30BPQ9UHR5 308 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms