RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 GJC2Q5T442 439 aaPredicted RBP25.66■■□□□ 1.7
CIRBP-219ENST00000588411 CCDC174Q6PII3 467 aa25.66■■□□□ 1.7
CIRBP-219ENST00000588411 MAMDC4Q6UXC1 1216 aa25.66■■□□□ 1.7
CIRBP-219ENST00000588411 IQCA1Q86XH1 822 aa25.66■■□□□ 1.7
CIRBP-219ENST00000588411 RNF146Q9NTX7 359 aa25.66■■□□□ 1.7
CIRBP-219ENST00000588411 RUFY2Q8WXA3 655 aa25.65■■□□□ 1.7
CIRBP-219ENST00000588411 AGBL1Q96MI9 1066 aa25.65■■□□□ 1.7
CIRBP-219ENST00000588411 XPNPEP3Q9NQH7 507 aa25.65■■□□□ 1.7
CIRBP-219ENST00000588411 NEDD4P46934 1319 aa25.64■■□□□ 1.7
CIRBP-219ENST00000588411 RAD50Q92878 1312 aa25.64■■□□□ 1.7
CIRBP-219ENST00000588411 A0A1W2PPC1 479 aa25.64■■□□□ 1.7
CIRBP-219ENST00000588411 ZNF865P0CJ78 1059 aaPredicted RBP25.64■■□□□ 1.7
CIRBP-219ENST00000588411 ALAS1P13196 640 aa25.64■■□□□ 1.7
CIRBP-219ENST00000588411 TRERF1Q96PN7 1200 aa25.64■■□□□ 1.7
CIRBP-219ENST00000588411 PRO3102Q9H379 93 aa25.64■■□□□ 1.7
CIRBP-219ENST00000588411 PNMA2Q9UL42 364 aa25.64■■□□□ 1.7
CIRBP-219ENST00000588411 CCPG1Q9ULG6 757 aa25.64■■□□□ 1.7
CIRBP-219ENST00000588411 ZNF536O15090 1300 aa25.63■■□□□ 1.69
CIRBP-219ENST00000588411 ALPK3Q96L96 1907 aa25.63■■□□□ 1.69
CIRBP-219ENST00000588411 POTEB2H3BUK9 544 aa25.63■■□□□ 1.69
CIRBP-219ENST00000588411 GSPT1P15170 499 aaKnown RBP25.63■■□□□ 1.69
CIRBP-219ENST00000588411 FXR1P51114 621 aaKnown RBP eCLIP25.63■■□□□ 1.69
CIRBP-219ENST00000588411 LRRC41Q15345 812 aa25.63■■□□□ 1.69
CIRBP-219ENST00000588411 SYDE2Q5VT97 1194 aa25.63■■□□□ 1.69
CIRBP-219ENST00000588411 BTNL9Q6UXG8 535 aa25.63■■□□□ 1.69
CIRBP-219ENST00000588411 RASGRP2Q7LDG7 609 aa25.63■■□□□ 1.69
CIRBP-219ENST00000588411 RNF180Q86T96 592 aa25.63■■□□□ 1.69
CIRBP-219ENST00000588411 DGKHQ86XP1 1220 aa25.63■■□□□ 1.69
CIRBP-219ENST00000588411 ZHX1Q9UKY1 873 aaPredicted RBP25.63■■□□□ 1.69
CIRBP-219ENST00000588411 FAM184BQ9ULE4 1060 aa25.63■■□□□ 1.69
CIRBP-219ENST00000588411 PLXNA1Q9UIW2 1896 aa25.63■■□□□ 1.69
CIRBP-219ENST00000588411 PDHBP11177 359 aa25.62■■□□□ 1.69
CIRBP-219ENST00000588411 TAL1P17542 331 aaPredicted RBP25.62■■□□□ 1.69
CIRBP-219ENST00000588411 ATN1P54259 1190 aaPredicted RBP25.62■■□□□ 1.69
CIRBP-219ENST00000588411 KRT23Q9C075 422 aa25.62■■□□□ 1.69
CIRBP-219ENST00000588411 RANBP17Q9H2T7 1088 aaKnown RBP25.62■■□□□ 1.69
CIRBP-219ENST00000588411 CNNM2Q9H8M5 875 aa25.62■■□□□ 1.69
CIRBP-219ENST00000588411 GPCPD1Q9NPB8 672 aa25.62■■□□□ 1.69
CIRBP-219ENST00000588411 TRIOBPQ9H2D6 2365 aa25.62■■□□□ 1.69
CIRBP-219ENST00000588411 FRMPD2Q68DX3 1309 aaPredicted RBP25.62■■□□□ 1.69
CIRBP-219ENST00000588411 KDM4AO75164 1064 aa25.61■■□□□ 1.69
CIRBP-219ENST00000588411 SNAI1O95863 264 aaPredicted RBP25.61■■□□□ 1.69
CIRBP-219ENST00000588411 ICAM1P05362 532 aa25.61■■□□□ 1.69
CIRBP-219ENST00000588411 SYN1P17600 705 aa25.61■■□□□ 1.69
CIRBP-219ENST00000588411 SLC16A2P36021 539 aa25.61■■□□□ 1.69
CIRBP-219ENST00000588411 ABHD16BQ9H3Z7 469 aa25.61■■□□□ 1.69
CIRBP-219ENST00000588411 A1CFQ9NQ94 594 aaKnown RBP25.61■■□□□ 1.69
CIRBP-219ENST00000588411 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.61■■□□□ 1.69
CIRBP-219ENST00000588411 SNAP25P60880 206 aa25.6■■□□□ 1.69
CIRBP-219ENST00000588411 TTBK2Q6IQ55 1244 aa25.6■■□□□ 1.69
CIRBP-219ENST00000588411 ZKSCAN3Q9BRR0 538 aa25.6■■□□□ 1.69
CIRBP-219ENST00000588411 PRKAG2Q9UGJ0 569 aa25.6■■□□□ 1.69
CIRBP-219ENST00000588411 B4E1Z4 1266 aa25.59■■□□□ 1.69
CIRBP-219ENST00000588411 BMP8BP34820 402 aa25.59■■□□□ 1.69
CIRBP-219ENST00000588411 ZNF543Q08ER8 600 aa25.59■■□□□ 1.69
CIRBP-219ENST00000588411 ACVR2BQ13705 512 aa25.59■■□□□ 1.69
CIRBP-219ENST00000588411 GPATCH4Q5T3I0 446 aaKnown RBP25.59■■□□□ 1.69
CIRBP-219ENST00000588411 ARMCX2Q7L311 632 aa25.59■■□□□ 1.69
CIRBP-219ENST00000588411 FAM133AQ8N9E0 248 aa25.59■■□□□ 1.69
CIRBP-219ENST00000588411 GDF15Q99988 308 aa25.59■■□□□ 1.69
CIRBP-219ENST00000588411 KAT14Q9H8E8 782 aa25.59■■□□□ 1.69
CIRBP-219ENST00000588411 LAMA4Q16363 1823 aa25.58■■□□□ 1.69
CIRBP-219ENST00000588411 ASB14A6NK59 587 aa25.58■■□□□ 1.69
CIRBP-219ENST00000588411 PGK1P00558 417 aa25.58■■□□□ 1.69
CIRBP-219ENST00000588411 SNHG28P0DPA3 235 aa25.58■■□□□ 1.69
CIRBP-219ENST00000588411 ADCYAP1R1P41586 468 aa25.58■■□□□ 1.69
CIRBP-219ENST00000588411 RTP1P59025 263 aa25.58■■□□□ 1.69
CIRBP-219ENST00000588411 ZSCAN10Q96SZ4 725 aaPredicted RBP25.58■■□□□ 1.69
CIRBP-219ENST00000588411 UBAC1Q9BSL1 405 aa25.58■■□□□ 1.69
CIRBP-219ENST00000588411 MAGEA10P43363 369 aaPredicted RBP25.57■■□□□ 1.68
CIRBP-219ENST00000588411 CNTN2Q02246 1040 aa25.57■■□□□ 1.68
CIRBP-219ENST00000588411 NSMFQ6X4W1 530 aa25.57■■□□□ 1.68
CIRBP-219ENST00000588411 SLC39A5Q6ZMH5 540 aa25.57■■□□□ 1.68
CIRBP-219ENST00000588411 CCDC144CPQ8IYA2 1237 aa25.57■■□□□ 1.68
CIRBP-219ENST00000588411 PNMA1Q8ND90 353 aa25.57■■□□□ 1.68
CIRBP-219ENST00000588411 FGD4Q96M96 766 aa25.57■■□□□ 1.68
CIRBP-219ENST00000588411 SPC25Q9HBM1 224 aa25.57■■□□□ 1.68
CIRBP-219ENST00000588411 PHF24Q9UPV7 400 aa25.57■■□□□ 1.68
CIRBP-219ENST00000588411 ATP11BQ9Y2G3 1177 aa25.57■■□□□ 1.68
CIRBP-219ENST00000588411 DUSP11O75319 330 aaKnown RBP25.56■■□□□ 1.68
CIRBP-219ENST00000588411 CHMLP26374 656 aa25.56■■□□□ 1.68
CIRBP-219ENST00000588411 MUM1L1Q5H9M0 696 aa25.56■■□□□ 1.68
CIRBP-219ENST00000588411 ANKS1AQ92625 1134 aa25.56■■□□□ 1.68
CIRBP-219ENST00000588411 FERMT2Q96AC1 680 aa25.56■■□□□ 1.68
CIRBP-219ENST00000588411 LBHD1Q9BQE6 289 aaPredicted RBP25.56■■□□□ 1.68
CIRBP-219ENST00000588411 TSEN34Q9BSV6 310 aaKnown RBP25.56■■□□□ 1.68
CIRBP-219ENST00000588411 CYP39A1Q9NYL5 469 aa25.56■■□□□ 1.68
CIRBP-219ENST00000588411 ZSWIM5Q9P217 1185 aa25.56■■□□□ 1.68
CIRBP-219ENST00000588411 TRDNQ13061 729 aa25.55■■□□□ 1.68
CIRBP-219ENST00000588411 LENG1Q96BZ8 264 aaPredicted RBP25.55■■□□□ 1.68
CIRBP-219ENST00000588411 IL25Q9H293 177 aa25.55■■□□□ 1.68
CIRBP-219ENST00000588411 U3KPZ7 1027 aaPredicted RBP25.55■■□□□ 1.68
CIRBP-219ENST00000588411 SNX17Q15036 470 aa25.54■■□□□ 1.68
CIRBP-219ENST00000588411 CCDC144BQ3MJ40 725 aa25.54■■□□□ 1.68
CIRBP-219ENST00000588411 C1orf53Q5VUE5 145 aa25.54■■□□□ 1.68
CIRBP-219ENST00000588411 UBE2OQ9C0C9 1292 aaKnown RBP25.54■■□□□ 1.68
CIRBP-219ENST00000588411 TNKSO95271 1327 aa25.54■■□□□ 1.68
CIRBP-219ENST00000588411 SYNRGQ9UMZ2 1314 aa25.54■■□□□ 1.68
CIRBP-219ENST00000588411 RANBP2P49792 3224 aaKnown RBP25.53■■□□□ 1.68
CIRBP-219ENST00000588411 SOWAHBA6NEL2 793 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms