RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 GOLGA8BA8MQT2 603 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 ICAM1P05362 532 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 CPA1P15085 419 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 CTGFP29279 349 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 FLT3LGP49771 235 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 RCAN1P53805 252 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 TRAF1Q13077 416 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 CDC37Q16543 378 aaPredicted RBP13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 APOA5Q6Q788 366 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 POTEEQ6S8J3 1075 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 NBPF11Q86T75 865 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 SLAIN1Q8ND83 568 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 CHST13Q8NET6 341 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 BRF1Q92994 677 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 MMP19Q99542 508 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 APBA2Q99767 749 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 UPF3BQ9BZI7 483 aaKnown RBP13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 UBA5Q9GZZ9 404 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 ACAD9Q9H845 621 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 ZSWIM6Q9HCJ5 1215 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 GPHNQ9NQX3 736 aaPredicted RBP13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 HOMER2Q9NSB8 354 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 RBM28Q9NW13 759 aaKnown RBP13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 SEC63Q9UGP8 760 aaKnown RBP13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 MAD2L2Q9UI95 211 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 PTCH2Q9Y6C5 1203 aa13.81□□□□□ -0.2
SDHDP1-201ENST00000588055 CCDC196A0A1B0GTZ2 297 aa13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 PALM3A6NDB9 673 aaPredicted RBP13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 GOLGA8AA7E2F4 631 aa13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 ALAS1P13196 640 aa13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 PTPREP23469 700 aa13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 METAP2P50579 478 aaKnown RBP eCLIP13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 IRF5Q13568 498 aa13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 GRB14Q14449 540 aa13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 RTN1Q16799 776 aa13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 CCDC144CPQ8IYA2 1237 aa13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 TRMT44Q8IYL2 757 aaKnown RBP13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 ADGRF4Q8IZF3 695 aa13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 ABRAQ8N0Z2 381 aa13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 RNF146Q9NTX7 359 aa13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 PDRG1Q9NUG6 133 aa13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 MYH6P13533 1939 aa13.8□□□□□ -0.2
SDHDP1-201ENST00000588055 RBBP6Q7Z6E9 1792 aaKnown RBP13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 SEC24BO95487 1268 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 RXRAP19793 462 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 ADORA2AP29274 412 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 SNAP25P60880 206 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 MAP2K5Q13163 448 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 PPP2R5BQ15173 497 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 ANKRD1Q15327 319 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 DPP9Q86TI2 863 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 HOMER1Q86YM7 354 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 ANKRD35Q8N283 1001 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 STAG2Q8N3U4 1231 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 FBXL16Q8N461 479 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 DDX11Q96FC9 970 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 AGBL1Q96MI9 1066 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 C22orf23Q9BZE7 217 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 CPVLQ9H3G5 476 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 VAT1LQ9HCJ6 419 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 BIN2Q9UBW5 565 aaPredicted RBP13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 GABRQQ9UN88 632 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 PFASO15067 1338 aa13.79□□□□□ -0.2
SDHDP1-201ENST00000588055 ZBTB5O15062 677 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 ADCY3O60266 1144 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 CYP2B6P20813 491 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 GRK4P32298 578 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 UBXN2AP68543 259 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 CAP1Q01518 475 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 APOBRQ0VD83 1088 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 COL9A3Q14050 684 aaPredicted RBP13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 USH1GQ495M9 461 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 MORN1Q5T089 497 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 FBXO11Q86XK2 927 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 RAB11FIP4Q86YS3 637 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 FANCBQ8NB91 859 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 PXYLP1Q8TE99 480 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 RRP36Q96EU6 259 aaKnown RBP13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 TRERF1Q96PN7 1200 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 SPZ1Q9BXG8 430 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 HPS5Q9UPZ3 1129 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 ZNF536O15090 1300 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 ABCB11O95342 1321 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 HTTP42858 3142 aa13.78□□□□□ -0.2
SDHDP1-201ENST00000588055 HMGCRP04035 888 aa13.77□□□□□ -0.21
SDHDP1-201ENST00000588055 XRCC5P13010 732 aaKnown RBP13.77□□□□□ -0.21
SDHDP1-201ENST00000588055 QRICH1Q2TAL8 776 aa13.77□□□□□ -0.21
SDHDP1-201ENST00000588055 AMNQ9BXJ7 453 aa13.77□□□□□ -0.21
SDHDP1-201ENST00000588055 AGXT2Q9BYV1 514 aa13.77□□□□□ -0.21
SDHDP1-201ENST00000588055 JMJD4Q9H9V9 463 aa13.77□□□□□ -0.21
SDHDP1-201ENST00000588055 RIPK3Q9Y572 518 aa13.77□□□□□ -0.21
SDHDP1-201ENST00000588055 SMARCA1P28370 1054 aa13.76□□□□□ -0.21
SDHDP1-201ENST00000588055 CPLX2Q6PUV4 134 aaKnown RBP13.76□□□□□ -0.21
SDHDP1-201ENST00000588055 NSMFQ6X4W1 530 aa13.76□□□□□ -0.21
SDHDP1-201ENST00000588055 TMTC3Q6ZXV5 915 aa13.76□□□□□ -0.21
SDHDP1-201ENST00000588055 IL17RAQ96F46 866 aa13.76□□□□□ -0.21
SDHDP1-201ENST00000588055 RIOX1Q9H6W3 641 aa13.76□□□□□ -0.21
SDHDP1-201ENST00000588055 BRPF3Q9ULD4 1205 aa13.76□□□□□ -0.21
SDHDP1-201ENST00000588055 MRPL11Q9Y3B7 192 aaKnown RBP13.76□□□□□ -0.21
SDHDP1-201ENST00000588055 NID2Q14112 1375 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms