RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 PARP14Q460N5 1801 aa12.9□□□□□ -0.34
PGAP3-209ENST00000584620 SMCHD1A6NHR9 2005 aa12.89□□□□□ -0.35
PGAP3-209ENST00000584620 SALL3Q9BXA9 1300 aa12.89□□□□□ -0.35
PGAP3-209ENST00000584620 ADAMTS4O75173 837 aa12.89□□□□□ -0.35
PGAP3-209ENST00000584620 APPP05067 770 aa12.89□□□□□ -0.35
PGAP3-209ENST00000584620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
PGAP3-209ENST00000584620 ZNF444Q8N0Y2 327 aaPredicted RBP12.89□□□□□ -0.35
PGAP3-209ENST00000584620 LRRC47Q8N1G4 583 aaKnown RBP12.89□□□□□ -0.35
PGAP3-209ENST00000584620 NEDD1Q8NHV4 660 aa12.89□□□□□ -0.35
PGAP3-209ENST00000584620 SLC38A10Q9HBR0 1119 aa12.89□□□□□ -0.35
PGAP3-209ENST00000584620 RAVER2Q9HCJ3 691 aaKnown RBP12.89□□□□□ -0.35
PGAP3-209ENST00000584620 CXXC1Q9P0U4 656 aaPredicted RBP12.89□□□□□ -0.35
PGAP3-209ENST00000584620 SYNPO2Q9UMS6 1093 aa12.89□□□□□ -0.35
PGAP3-209ENST00000584620 PLIN4Q96Q06 1357 aa12.89□□□□□ -0.35
PGAP3-209ENST00000584620 BDP1A6H8Y1 2624 aa12.88□□□□□ -0.35
PGAP3-209ENST00000584620 FAM86C2PA6NEL3 165 aa12.88□□□□□ -0.35
PGAP3-209ENST00000584620 TTLL1O95922 423 aa12.88□□□□□ -0.35
PGAP3-209ENST00000584620 AKR1A1P14550 325 aa12.88□□□□□ -0.35
PGAP3-209ENST00000584620 MAMDC4Q6UXC1 1216 aa12.88□□□□□ -0.35
PGAP3-209ENST00000584620 C16orf59Q7L2K0 433 aa12.88□□□□□ -0.35
PGAP3-209ENST00000584620 CPXCR1Q8N123 301 aa12.88□□□□□ -0.35
PGAP3-209ENST00000584620 GMCL1P1Q8NEA9 526 aa12.88□□□□□ -0.35
PGAP3-209ENST00000584620 KIFC2Q96AC6 838 aa12.88□□□□□ -0.35
PGAP3-209ENST00000584620 FEM1BQ9UK73 627 aa12.88□□□□□ -0.35
PGAP3-209ENST00000584620 MYH7P12883 1935 aa12.88□□□□□ -0.35
PGAP3-209ENST00000584620 A0A1W2PQ45 241 aaPredicted RBP12.87□□□□□ -0.35
PGAP3-209ENST00000584620 A0A1W2PQY0 241 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 ERC2O15083 957 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 ADCY6O43306 1168 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 ZBED4O75132 1171 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
PGAP3-209ENST00000584620 PPARAQ07869 468 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 FAAP100Q0VG06 881 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 LRRFIP1Q32MZ4 808 aaKnown RBP12.87□□□□□ -0.35
PGAP3-209ENST00000584620 CCSAPQ6IQ19 270 aaPredicted RBP12.87□□□□□ -0.35
PGAP3-209ENST00000584620 RNF180Q86T96 592 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 MSL3Q8N5Y2 521 aaKnown RBP12.87□□□□□ -0.35
PGAP3-209ENST00000584620 KLHDC9Q8NEP7 349 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 DDX11Q96FC9 970 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 FSD1Q9BTV5 496 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 TSPYL2Q9H2G4 693 aaPredicted RBP12.87□□□□□ -0.35
PGAP3-209ENST00000584620 NKX2-4Q9H2Z4 354 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 ZNF287Q9HBT7 754 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 C11orf16Q9NQ32 467 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 INCENPQ9NQS7 918 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 CNPY2Q9Y2B0 182 aa12.87□□□□□ -0.35
PGAP3-209ENST00000584620 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
PGAP3-209ENST00000584620 MYH8P13535 1937 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 MUC6Q6W4X9 2439 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 MYADML2A6NDP7 307 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 TSPY3P0CV98 308 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 TSPY8P0CW00 308 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 ACRP10323 421 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 BMP3P12645 472 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 MX1P20591 662 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 SLC4A3P48751 1232 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 TFAP4Q01664 338 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 SKIV2LQ15477 1246 aaKnown RBP12.86□□□□□ -0.35
PGAP3-209ENST00000584620 TMEM240Q5SV17 173 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 SLFN13Q68D06 897 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 ZNF467Q7Z7K2 595 aaPredicted RBP12.86□□□□□ -0.35
PGAP3-209ENST00000584620 KHSRPQ92945 711 aaKnown RBP eCLIP12.86□□□□□ -0.35
PGAP3-209ENST00000584620 NACAP1Q9BZK3 213 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 NAPBQ9H115 298 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 FAM184BQ9ULE4 1060 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 ZNF536O15090 1300 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 SYNRGQ9UMZ2 1314 aa12.86□□□□□ -0.35
PGAP3-209ENST00000584620 COL11A1P12107 1806 aaPredicted RBP12.85□□□□□ -0.35
PGAP3-209ENST00000584620 TMEM232C9JQI7 657 aa12.85□□□□□ -0.35
PGAP3-209ENST00000584620 TIMP1P01033 207 aa12.85□□□□□ -0.35
PGAP3-209ENST00000584620 OAZ1P54368 228 aa12.85□□□□□ -0.35
PGAP3-209ENST00000584620 RRP1P56182 461 aaKnown RBP12.85□□□□□ -0.35
PGAP3-209ENST00000584620 PDE4BQ07343 736 aa12.85□□□□□ -0.35
PGAP3-209ENST00000584620 ACVR2BQ13705 512 aa12.85□□□□□ -0.35
PGAP3-209ENST00000584620 VPS53Q5VIR6 699 aa12.85□□□□□ -0.35
PGAP3-209ENST00000584620 CHST13Q8NET6 341 aa12.85□□□□□ -0.35
PGAP3-209ENST00000584620 GMCL1Q96IK5 515 aa12.85□□□□□ -0.35
PGAP3-209ENST00000584620 TSEN34Q9BSV6 310 aaKnown RBP12.85□□□□□ -0.35
PGAP3-209ENST00000584620 KATNBL1Q9H079 304 aa12.85□□□□□ -0.35
PGAP3-209ENST00000584620 IL17RBQ9NRM6 502 aa12.85□□□□□ -0.35
PGAP3-209ENST00000584620 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.85□□□□□ -0.35
PGAP3-209ENST00000584620 MSRAQ9UJ68 235 aa12.85□□□□□ -0.35
PGAP3-209ENST00000584620 ZHX1Q9UKY1 873 aaPredicted RBP12.85□□□□□ -0.35
PGAP3-209ENST00000584620 PIEZO1Q92508 2521 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 DCDC2CA8MYV0 355 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 NMT2O60551 498 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 DUSP11O75319 330 aaKnown RBP12.84□□□□□ -0.35
PGAP3-209ENST00000584620 MCCP23508 829 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 NOVP48745 357 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 ACLYP53396 1101 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 CNTN2Q02246 1040 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 CTDSPL2Q05D32 466 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 KCNA10Q16322 511 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 RASIP1Q5U651 963 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 ZNF365Q70YC5 407 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 RASGRP2Q7LDG7 609 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 ANKRD33Q7Z3H0 272 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 ANKRD35Q8N283 1001 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 CHMP4CQ96CF2 233 aa12.84□□□□□ -0.35
PGAP3-209ENST00000584620 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms