RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SAMM50Q9Y512 469 aa12.68□□□□□ -0.38
TOP3A-217ENST00000584582 PPIP5K2O43314 1243 aa12.68□□□□□ -0.38
TOP3A-217ENST00000584582 RASA1P20936 1047 aa12.68□□□□□ -0.38
TOP3A-217ENST00000584582 NCAPHQ15003 741 aa12.68□□□□□ -0.38
TOP3A-217ENST00000584582 MIGA2Q7L4E1 593 aa12.68□□□□□ -0.38
TOP3A-217ENST00000584582 DGKHQ86XP1 1220 aa12.68□□□□□ -0.38
TOP3A-217ENST00000584582 TBC1D22AQ8WUA7 517 aa12.68□□□□□ -0.38
TOP3A-217ENST00000584582 TDRD3Q9H7E2 651 aaKnown RBP12.68□□□□□ -0.38
TOP3A-217ENST00000584582 B4DLN1 442 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 MEIS1O00470 390 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 ENC1O14682 589 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 PHACTR2O75167 634 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 TDP2O95551 362 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
TOP3A-217ENST00000584582 RNASE9P60153 205 aaKnown RBP12.67□□□□□ -0.38
TOP3A-217ENST00000584582 NCAPH2Q6IBW4 605 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 TYW1BQ6NUM6 668 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 OGFOD1Q8N543 542 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 CDC25BP30305 580 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 PRCPP42785 496 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 SPA17Q15506 151 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 PRR16Q569H4 304 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 KRT25Q7Z3Z0 450 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 TICAM2Q86XR7 235 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 PSTPIP2Q9H939 334 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 DAGLAQ9Y4D2 1042 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 PCDHA1Q9Y5I3 950 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 SPDYE3A6NKU9 549 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 ECM2O94769 699 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-217ENST00000584582 HOXA13P31271 388 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-217ENST00000584582 NFIAQ12857 509 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 SF3B2Q13435 895 aaKnown RBP12.67□□□□□ -0.38
TOP3A-217ENST00000584582 HERC4Q5GLZ8 1057 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-217ENST00000584582 POTEDQ86YR6 584 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 ENOX1Q8TC92 643 aaKnown RBP12.67□□□□□ -0.38
TOP3A-217ENST00000584582 CCDC94Q9BW85 323 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-217ENST00000584582 PCDHAC2Q9Y5I4 1007 aa12.67□□□□□ -0.38
TOP3A-217ENST00000584582 USP17L10C9JJH3 530 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 MRPL12P52815 198 aaKnown RBP12.66□□□□□ -0.38
TOP3A-217ENST00000584582 NCBP1Q09161 790 aaKnown RBP12.66□□□□□ -0.38
TOP3A-217ENST00000584582 PRKG1Q13976 671 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 CERKLQ49MI3 558 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-217ENST00000584582 GSDMAQ96QA5 445 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 TUBE1Q9UJT0 475 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 TFR2Q9UP52 801 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 HPSEQ9Y251 543 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 FLT1P17948 1338 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 ACTN4O43707 911 aaKnown RBP12.66□□□□□ -0.38
TOP3A-217ENST00000584582 C21orf2O43822 256 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-217ENST00000584582 KRT31Q15323 416 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 KMT5BQ4FZB7 885 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 ZNF397Q8NF99 534 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-217ENST00000584582 CCDC102AQ96A19 550 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.66□□□□□ -0.387e-6■■■■□ 21
TOP3A-217ENST00000584582 ORC4O43929 436 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 FCER1AP12319 257 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 SPAG1Q07617 926 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 CCDC122Q5T0U0 273 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 CCDC84Q86UT8 332 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-217ENST00000584582 KIFC2Q96AC6 838 aa12.66□□□□□ -0.38
TOP3A-217ENST00000584582 TERF1P54274 439 aa12.65□□□□□ -0.38
TOP3A-217ENST00000584582 LARGE2Q8N3Y3 721 aa12.65□□□□□ -0.38
TOP3A-217ENST00000584582 CNTNAP4Q9C0A0 1308 aa12.65□□□□□ -0.38
TOP3A-217ENST00000584582 SORBS3O60504 671 aa12.65□□□□□ -0.38
TOP3A-217ENST00000584582 COPB1P53618 953 aaKnown RBP12.65□□□□□ -0.38
TOP3A-217ENST00000584582 CYP27A1Q02318 531 aa12.65□□□□□ -0.38
TOP3A-217ENST00000584582 PPP2R3AQ06190 1150 aa12.65□□□□□ -0.38
TOP3A-217ENST00000584582 AOC3Q16853 763 aa12.65□□□□□ -0.38
TOP3A-217ENST00000584582 TSG101Q99816 390 aa12.65□□□□□ -0.38
TOP3A-217ENST00000584582 DISC1Q9NRI5 854 aa12.65□□□□□ -0.38
TOP3A-217ENST00000584582 PCDHA12Q9UN75 941 aa12.65□□□□□ -0.38
TOP3A-217ENST00000584582 SCN11AQ9UI33 1791 aa12.65□□□□□ -0.38
TOP3A-217ENST00000584582 SEC31AO94979 1220 aaKnown RBP12.65□□□□□ -0.39
TOP3A-217ENST00000584582 MRPS25P82663 173 aaKnown RBP12.65□□□□□ -0.39
TOP3A-217ENST00000584582 ICA1Q05084 483 aa12.65□□□□□ -0.39
TOP3A-217ENST00000584582 SEPT2Q15019 361 aa12.65□□□□□ -0.39
TOP3A-217ENST00000584582 CCDC181Q5TID7 509 aa12.65□□□□□ -0.39
TOP3A-217ENST00000584582 SLFN13Q68D06 897 aa12.65□□□□□ -0.39
TOP3A-217ENST00000584582 CNGA4Q8IV77 575 aa12.65□□□□□ -0.39
TOP3A-217ENST00000584582 NLGN1Q8N2Q7 840 aa12.65□□□□□ -0.39
TOP3A-217ENST00000584582 ERO1AQ96HE7 468 aa12.65□□□□□ -0.39
TOP3A-217ENST00000584582 PCDHA6Q9UN73 950 aa12.65□□□□□ -0.39
TOP3A-217ENST00000584582 PCDHA8Q9Y5H6 950 aa12.65□□□□□ -0.39
TOP3A-217ENST00000584582 PCP11498 1178 aaKnown RBP12.64□□□□□ -0.39
TOP3A-217ENST00000584582 ATP2C1P98194 919 aaPredicted RBP12.64□□□□□ -0.39
TOP3A-217ENST00000584582 SYCP1Q15431 976 aa12.64□□□□□ -0.39
TOP3A-217ENST00000584582 DCAF17Q5H9S7 520 aaPredicted RBP12.64□□□□□ -0.39
TOP3A-217ENST00000584582 SLC10A5Q5PT55 438 aa12.64□□□□□ -0.39
TOP3A-217ENST00000584582 RC3H1Q5TC82 1133 aaKnown RBP12.64□□□□□ -0.39
TOP3A-217ENST00000584582 RCSD1Q6JBY9 416 aa12.64□□□□□ -0.39
TOP3A-217ENST00000584582 SLC30A10Q6XR72 485 aa12.64□□□□□ -0.39
TOP3A-217ENST00000584582 CUL5Q93034 780 aa12.64□□□□□ -0.39
TOP3A-217ENST00000584582 CCDC42Q96M95 316 aa12.64□□□□□ -0.39
TOP3A-217ENST00000584582 MARF1Q9Y4F3 1742 aaKnown RBP12.64□□□□□ -0.39
TOP3A-217ENST00000584582 CYTH3O43739 400 aa12.64□□□□□ -0.39
TOP3A-217ENST00000584582 WDR24Q96S15 920 aa12.64□□□□□ -0.39
TOP3A-217ENST00000584582 KIAA1024Q9UPX6 916 aa12.64□□□□□ -0.39
TOP3A-217ENST00000584582 LONP1P36776 959 aaKnown RBP12.64□□□□□ -0.39
TOP3A-217ENST00000584582 ZNF710Q8N1W2 664 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms