RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 TDHQ8IZJ6 230 aa29.21■■■□□ 2.27
TSEN54-209ENST00000583454 GMCL1Q96IK5 515 aa29.21■■■□□ 2.27
TSEN54-209ENST00000583454 MMP19Q99542 508 aa29.21■■■□□ 2.27
TSEN54-209ENST00000583454 TMEM47Q9BQJ4 181 aa29.21■■■□□ 2.27
TSEN54-209ENST00000583454 ATN1P54259 1190 aaPredicted RBP29.2■■■□□ 2.26
TSEN54-209ENST00000583454 STOX1Q6ZVD7 989 aa29.2■■■□□ 2.26
TSEN54-209ENST00000583454 IQCA1Q86XH1 822 aa29.2■■■□□ 2.26
TSEN54-209ENST00000583454 DGKHQ86XP1 1220 aa29.2■■■□□ 2.26
TSEN54-209ENST00000583454 ANKS1AQ92625 1134 aa29.2■■■□□ 2.26
TSEN54-209ENST00000583454 A0A0C4DFX4 3053 aa29.2■■■□□ 2.26
TSEN54-209ENST00000583454 SLC27A2O14975 620 aa29.19■■■□□ 2.26
TSEN54-209ENST00000583454 TRDNQ13061 729 aa29.19■■■□□ 2.26
TSEN54-209ENST00000583454 CREB3L3Q68CJ9 461 aa29.19■■■□□ 2.26
TSEN54-209ENST00000583454 SLF1Q9BQI6 1058 aa29.19■■■□□ 2.26
TSEN54-209ENST00000583454 ZKSCAN3Q9BRR0 538 aa29.19■■■□□ 2.26
TSEN54-209ENST00000583454 UBE2OQ9C0C9 1292 aaKnown RBP29.19■■■□□ 2.26
TSEN54-209ENST00000583454 ARRDC4Q8NCT1 418 aa29.18■■■□□ 2.26
TSEN54-209ENST00000583454 ZSCAN10Q96SZ4 725 aaPredicted RBP29.18■■■□□ 2.26
TSEN54-209ENST00000583454 DIS3Q9Y2L1 958 aaKnown RBP29.18■■■□□ 2.26
TSEN54-209ENST00000583454 MCM3APO60318 1980 aa29.18■■■□□ 2.26
TSEN54-209ENST00000583454 BMP3P12645 472 aa29.17■■■□□ 2.26
TSEN54-209ENST00000583454 RTP1P59025 263 aa29.17■■■□□ 2.26
TSEN54-209ENST00000583454 MDM2Q00987 491 aaPredicted RBP29.17■■■□□ 2.26
TSEN54-209ENST00000583454 NCOA7Q8NI08 942 aa29.17■■■□□ 2.26
TSEN54-209ENST00000583454 TINF2Q9BSI4 451 aa29.17■■■□□ 2.26
TSEN54-209ENST00000583454 FEM1BQ9UK73 627 aa29.17■■■□□ 2.26
TSEN54-209ENST00000583454 RIPK3Q9Y572 518 aa29.17■■■□□ 2.26
TSEN54-209ENST00000583454 TAL1P17542 331 aaPredicted RBP29.16■■■□□ 2.26
TSEN54-209ENST00000583454 MCCP23508 829 aa29.16■■■□□ 2.26
TSEN54-209ENST00000583454 COPB2P35606 906 aa29.16■■■□□ 2.26
TSEN54-209ENST00000583454 KCTD2Q14681 263 aa29.16■■■□□ 2.26
TSEN54-209ENST00000583454 SNX17Q15036 470 aa29.16■■■□□ 2.26
TSEN54-209ENST00000583454 LRRC41Q15345 812 aa29.16■■■□□ 2.26
TSEN54-209ENST00000583454 GPR153Q6NV75 609 aa29.16■■■□□ 2.26
TSEN54-209ENST00000583454 CYB5R4Q7L1T6 521 aa29.16■■■□□ 2.26
TSEN54-209ENST00000583454 ENAHQ8N8S7 591 aaPredicted RBP29.16■■■□□ 2.26
TSEN54-209ENST00000583454 TEX13BQ9BXU2 312 aa29.16■■■□□ 2.26
TSEN54-209ENST00000583454 NRBP1Q9UHY1 535 aa29.16■■■□□ 2.26
TSEN54-209ENST00000583454 SLC1A4P43007 532 aa29.15■■■□□ 2.26
TSEN54-209ENST00000583454 PRPF38AQ8NAV1 312 aaKnown RBP29.15■■■□□ 2.26
TSEN54-209ENST00000583454 ATP2A1O14983 1001 aa29.14■■■□□ 2.26
TSEN54-209ENST00000583454 SNRNP48Q6IEG0 339 aaKnown RBP29.14■■■□□ 2.26
TSEN54-209ENST00000583454 SLC39A5Q6ZMH5 540 aa29.14■■■□□ 2.26
TSEN54-209ENST00000583454 RALYLQ86SE5 291 aaKnown RBP29.14■■■□□ 2.26
TSEN54-209ENST00000583454 DCAF4Q8WV16 495 aa29.14■■■□□ 2.26
TSEN54-209ENST00000583454 UBAC1Q9BSL1 405 aa29.14■■■□□ 2.26
TSEN54-209ENST00000583454 TNKSO95271 1327 aa29.14■■■□□ 2.25
TSEN54-209ENST00000583454 DNAJC25-GNG10A0A024R161 153 aa29.13■■■□□ 2.25
TSEN54-209ENST00000583454 KBTBD13C9JR72 458 aa29.13■■■□□ 2.25
TSEN54-209ENST00000583454 PLA2G6O60733 806 aa29.13■■■□□ 2.25
TSEN54-209ENST00000583454 ZNF865P0CJ78 1059 aaPredicted RBP29.13■■■□□ 2.25
TSEN54-209ENST00000583454 SEC23AQ15436 765 aa29.13■■■□□ 2.25
TSEN54-209ENST00000583454 RNF20Q5VTR2 975 aa29.13■■■□□ 2.25
TSEN54-209ENST00000583454 MB21D2Q8IYB1 491 aaPredicted RBP29.13■■■□□ 2.25
TSEN54-209ENST00000583454 TMEM232C9JQI7 657 aa29.12■■■□□ 2.25
TSEN54-209ENST00000583454 REC8O95072 547 aa29.12■■■□□ 2.25
TSEN54-209ENST00000583454 TSGA10IPQ3SY00 556 aa29.12■■■□□ 2.25
TSEN54-209ENST00000583454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.12■■■□□ 2.25
TSEN54-209ENST00000583454 SLC38A10Q9HBR0 1119 aa29.12■■■□□ 2.25
TSEN54-209ENST00000583454 SNHG28P0DPA3 235 aa29.11■■■□□ 2.25
TSEN54-209ENST00000583454 ADCYAP1R1P41586 468 aa29.11■■■□□ 2.25
TSEN54-209ENST00000583454 RASGRP2Q7LDG7 609 aa29.11■■■□□ 2.25
TSEN54-209ENST00000583454 CHURC1Q8WUH1 139 aa29.11■■■□□ 2.25
TSEN54-209ENST00000583454 ATP11BQ9Y2G3 1177 aa29.11■■■□□ 2.25
TSEN54-209ENST00000583454 PDHBP11177 359 aa29.1■■■□□ 2.25
TSEN54-209ENST00000583454 ANTXR2P58335 489 aa29.1■■■□□ 2.25
TSEN54-209ENST00000583454 KCTD1Q719H9 257 aa29.1■■■□□ 2.25
TSEN54-209ENST00000583454 FAM160B2Q86V87 743 aa29.1■■■□□ 2.25
TSEN54-209ENST00000583454 KCNB2Q92953 911 aa29.1■■■□□ 2.25
TSEN54-209ENST00000583454 LENG1Q96BZ8 264 aaPredicted RBP29.1■■■□□ 2.25
TSEN54-209ENST00000583454 XPNPEP3Q9NQH7 507 aa29.1■■■□□ 2.25
TSEN54-209ENST00000583454 PHF24Q9UPV7 400 aa29.1■■■□□ 2.25
TSEN54-209ENST00000583454 EPB41L2O43491 1005 aaKnown RBP29.09■■■□□ 2.25
TSEN54-209ENST00000583454 STAT2P52630 851 aa29.09■■■□□ 2.25
TSEN54-209ENST00000583454 TRIM60Q495X7 471 aa29.09■■■□□ 2.25
TSEN54-209ENST00000583454 C1orf53Q5VUE5 145 aa29.09■■■□□ 2.25
TSEN54-209ENST00000583454 Q7L0L9 218 aa29.09■■■□□ 2.25
TSEN54-209ENST00000583454 RASEFQ8IZ41 740 aa29.09■■■□□ 2.25
TSEN54-209ENST00000583454 PNMA1Q8ND90 353 aa29.09■■■□□ 2.25
TSEN54-209ENST00000583454 FERMT2Q96AC1 680 aa29.09■■■□□ 2.25
TSEN54-209ENST00000583454 KIFC2Q96AC6 838 aa29.09■■■□□ 2.25
TSEN54-209ENST00000583454 CHMP4CQ96CF2 233 aa29.09■■■□□ 2.25
TSEN54-209ENST00000583454 FGD4Q96M96 766 aa29.09■■■□□ 2.25
TSEN54-209ENST00000583454 KAT14Q9H8E8 782 aa29.09■■■□□ 2.25
TSEN54-209ENST00000583454 MTMR7Q9Y216 660 aa29.09■■■□□ 2.25
TSEN54-209ENST00000583454 SNAI1O95863 264 aaPredicted RBP29.08■■■□□ 2.25
TSEN54-209ENST00000583454 MYCNP04198 464 aaPredicted RBP29.08■■■□□ 2.25
TSEN54-209ENST00000583454 RARBP10826 455 aa29.08■■■□□ 2.25
TSEN54-209ENST00000583454 IFIT1BQ5T764 474 aaKnown RBP29.08■■■□□ 2.25
TSEN54-209ENST00000583454 MAMDC4Q6UXC1 1216 aa29.08■■■□□ 2.25
TSEN54-209ENST00000583454 BTNL9Q6UXG8 535 aa29.08■■■□□ 2.25
TSEN54-209ENST00000583454 CPXCR1Q8N123 301 aa29.08■■■□□ 2.25
TSEN54-209ENST00000583454 MTA3Q9BTC8 594 aa29.08■■■□□ 2.25
TSEN54-209ENST00000583454 RAVER2Q9HCJ3 691 aaKnown RBP29.08■■■□□ 2.25
TSEN54-209ENST00000583454 IFIT3O14879 490 aaKnown RBP29.07■■■□□ 2.24
TSEN54-209ENST00000583454 PGK1P00558 417 aa29.07■■■□□ 2.24
TSEN54-209ENST00000583454 FDX1P10109 184 aa29.07■■■□□ 2.24
TSEN54-209ENST00000583454 CCDC96Q2M329 555 aa29.07■■■□□ 2.24
TSEN54-209ENST00000583454 MSL3Q8N5Y2 521 aaKnown RBP29.07■■■□□ 2.24
TSEN54-209ENST00000583454 DEFB123Q8N688 67 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms