RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 ARL8AQ96BM9 186 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 RNF41Q9H4P4 317 aaPredicted RBP10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 MAGEC2Q9UBF1 373 aaPredicted RBP10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 COL18A1P39060 1754 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 NKRFO15226 690 aaKnown RBP eCLIP10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 BMP15O95972 392 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 ATP1A2P50993 1020 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 CCDC96Q2M329 555 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 KCTD16Q68DU8 428 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 ADSSL1Q8N142 457 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 TSEN2Q8NCE0 465 aaKnown RBP10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 RASGRP4Q8TDF6 673 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 AENQ8WTP8 325 aaKnown RBP10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 ZSCAN10Q96SZ4 725 aaPredicted RBP10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 ZNHIT6Q9NWK9 470 aaKnown RBP10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 FAM184BQ9ULE4 1060 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 KAT6BQ8WYB5 2073 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 NHSL1Q5SYE7 1610 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 MYH10P35580 1976 aa10.7□□□□□ -0.7
PPP4R1-222ENST00000582594 TNS3Q68CZ2 1445 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 COL22A1Q8NFW1 1626 aaPredicted RBP10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 RASSF10A6NK89 507 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 NMT2O60551 498 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 MOCS3O95396 460 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 CPP00450 1065 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 FGFR2P21802 821 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 PPFIA1Q13136 1202 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 SH2D3CQ8N5H7 860 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 CERKQ8TCT0 537 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 SECISBP2LQ93073 1101 aaKnown RBP10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 RMND1Q9NWS8 449 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 CAPN6Q9Y6Q1 641 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 GRIN2DO15399 1336 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 SHTN1A0MZ66 631 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 NCK2O43639 380 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 TBC1D8BQ0IIM8 1120 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 PDCLQ13371 301 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 CCDC70Q6NSX1 233 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 NFRKBQ6P4R8 1299 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 SRBD1Q8N5C6 995 aaKnown RBP10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 RPGRIP1Q96KN7 1286 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 TUBGCP2Q9BSJ2 902 aa10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 PDS5AQ29RF7 1337 aaKnown RBP10.69□□□□□ -0.7
PPP4R1-222ENST00000582594 TIAM2Q8IVF5 1701 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 ZNF263O14978 683 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 EIF3HO15372 352 aaKnown RBP eCLIP10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 GNAT2P19087 354 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 DYNLL1P63167 89 aaKnown RBP10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 KIF5AQ12840 1032 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 CREG2Q8IUH2 290 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 EHBP1Q8NDI1 1231 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 EXOC1Q9NV70 894 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 ALS2Q96Q42 1657 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 PDE8AO60658 829 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 ERCC3P19447 782 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 INPP5BP32019 993 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 MTIF2P46199 727 aaKnown RBP10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 DNA2P51530 1060 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 MNAT1P51948 309 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 SLC4A8Q2Y0W8 1093 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 TTMPQ5BVD1 217 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 ANKRD13CQ8N6S4 541 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 RUFY1Q96T51 708 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 YY1AP1Q9H869 796 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 TMOD3Q9NYL9 352 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 UBR2Q8IWV8 1755 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 A0A1W2PQC6 194 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 ZEB2O60315 1214 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 HNRNPH1P31943 449 aaKnown RBP10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 FAM47AQ5JRC9 791 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 MCTP2Q6DN12 878 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 TYW1BQ6NUM6 668 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 CSGALNACT2Q8N6G5 542 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 SNX12Q9UMY4 172 aa10.68□□□□□ -0.7
PPP4R1-222ENST00000582594 CNTNAP5Q8WYK1 1306 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 ZPR1O75312 459 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 SRGNP10124 158 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 EEF1GP26641 437 aaKnown RBP10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 DNM2P50570 870 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 TROAPQ12815 778 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 MEA1Q16626 185 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 TMTC3Q6ZXV5 915 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 GPKOWQ92917 476 aaPredicted RBP eCLIP10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 CCDC42Q96M95 316 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 PNPLA7Q6ZV29 1317 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 BAZ2AQ9UIF9 1905 aaKnown RBP10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 MAGEB6P1A0A0J9YX57 407 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 PSMA7O14818 248 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 SPA17Q15506 151 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 NAALADL2Q58DX5 795 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 CCDC181Q5TID7 509 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 IQCEQ6IPM2 695 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 KCNV1Q6PIU1 500 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 SUGP1Q8IWZ8 645 aaKnown RBP10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 AMOTL1Q8IY63 956 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 SPATA4Q8NEY3 305 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 HPS3Q969F9 1004 aa10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 CNOT6LQ96LI5 555 aaKnown RBP10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 DUSP9Q99956 384 aaKnown RBP10.67□□□□□ -0.7
PPP4R1-222ENST00000582594 TTYH3Q9C0H2 523 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms