RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 KBTBD13C9JR72 458 aa14.76□□□□□ -0.05
SENP3-204ENST00000580997 SNAI1O95863 264 aaPredicted RBP14.76□□□□□ -0.05
SENP3-204ENST00000580997 RARBP10826 455 aa14.76□□□□□ -0.05
SENP3-204ENST00000580997 ATN1P54259 1190 aaPredicted RBP14.76□□□□□ -0.05
SENP3-204ENST00000580997 CNPY2Q9Y2B0 182 aa14.76□□□□□ -0.05
SENP3-204ENST00000580997 CTDP1Q9Y5B0 961 aaPredicted RBP14.76□□□□□ -0.05
SENP3-204ENST00000580997 CCDC171Q6TFL3 1326 aa14.75□□□□□ -0.05
SENP3-204ENST00000580997 SOX1O00570 391 aaPredicted RBP14.75□□□□□ -0.05
SENP3-204ENST00000580997 RANBP6O60518 1105 aaKnown RBP14.75□□□□□ -0.05
SENP3-204ENST00000580997 PCP11498 1178 aaKnown RBP14.75□□□□□ -0.05
SENP3-204ENST00000580997 AKR1A1P14550 325 aa14.75□□□□□ -0.05
SENP3-204ENST00000580997 SDSP20132 328 aa14.75□□□□□ -0.05
SENP3-204ENST00000580997 LRIT3Q3SXY7 679 aa14.75□□□□□ -0.05
SENP3-204ENST00000580997 ANKRD35Q8N283 1001 aa14.75□□□□□ -0.05
SENP3-204ENST00000580997 RILPL2Q969X0 211 aa14.75□□□□□ -0.05
SENP3-204ENST00000580997 FGD4Q96M96 766 aa14.75□□□□□ -0.05
SENP3-204ENST00000580997 XPNPEP3Q9NQH7 507 aa14.75□□□□□ -0.05
SENP3-204ENST00000580997 PHF24Q9UPV7 400 aa14.75□□□□□ -0.05
SENP3-204ENST00000580997 LAMA2P24043 3122 aaKnown RBP14.75□□□□□ -0.05
SENP3-204ENST00000580997 KCNA4P22459 653 aa14.74□□□□□ -0.05
SENP3-204ENST00000580997 ADCYAP1R1P41586 468 aa14.74□□□□□ -0.05
SENP3-204ENST00000580997 RTP1P59025 263 aa14.74□□□□□ -0.05
SENP3-204ENST00000580997 GPR153Q6NV75 609 aa14.74□□□□□ -0.05
SENP3-204ENST00000580997 RNF180Q86T96 592 aa14.74□□□□□ -0.05
SENP3-204ENST00000580997 TDHQ8IZJ6 230 aa14.74□□□□□ -0.05
SENP3-204ENST00000580997 AGBL1Q96MI9 1066 aa14.74□□□□□ -0.05
SENP3-204ENST00000580997 UBE2OQ9C0C9 1292 aaKnown RBP14.74□□□□□ -0.05
SENP3-204ENST00000580997 PRR12Q9ULL5 1215 aa14.74□□□□□ -0.05
SENP3-204ENST00000580997 ADAMTS4O75173 837 aa14.73□□□□□ -0.05
SENP3-204ENST00000580997 SLC4A3P48751 1232 aa14.73□□□□□ -0.05
SENP3-204ENST00000580997 MFAP1P55081 439 aaKnown RBP14.73□□□□□ -0.05
SENP3-204ENST00000580997 TKFCQ3LXA3 575 aa14.73□□□□□ -0.05
SENP3-204ENST00000580997 BTNL9Q6UXG8 535 aa14.73□□□□□ -0.05
SENP3-204ENST00000580997 KCTD1Q719H9 257 aa14.73□□□□□ -0.05
SENP3-204ENST00000580997 FAM133AQ8N9E0 248 aa14.73□□□□□ -0.05
SENP3-204ENST00000580997 DCAF4Q8WV16 495 aa14.73□□□□□ -0.05
SENP3-204ENST00000580997 TTC14Q96N46 770 aa14.73□□□□□ -0.05
SENP3-204ENST00000580997 TMEM47Q9BQJ4 181 aa14.73□□□□□ -0.05
SENP3-204ENST00000580997 ABHD16BQ9H3Z7 469 aa14.73□□□□□ -0.05
SENP3-204ENST00000580997 ACAD9Q9H845 621 aa14.73□□□□□ -0.05
SENP3-204ENST00000580997 FAM184BQ9ULE4 1060 aa14.73□□□□□ -0.05
SENP3-204ENST00000580997 PLXNA1Q9UIW2 1896 aa14.73□□□□□ -0.05
SENP3-204ENST00000580997 DUSP11O75319 330 aaKnown RBP14.72□□□□□ -0.05
SENP3-204ENST00000580997 PGK1P00558 417 aa14.72□□□□□ -0.05
SENP3-204ENST00000580997 TOP1P11387 765 aaKnown RBP14.72□□□□□ -0.05
SENP3-204ENST00000580997 CD44P16070 742 aaKnown RBP14.72□□□□□ -0.05
SENP3-204ENST00000580997 NT5C2P49902 561 aa14.72□□□□□ -0.05
SENP3-204ENST00000580997 CNTN2Q02246 1040 aa14.72□□□□□ -0.05
SENP3-204ENST00000580997 IKQ13123 557 aaPredicted RBP14.72□□□□□ -0.05
SENP3-204ENST00000580997 ACVR2BQ13705 512 aa14.72□□□□□ -0.05
SENP3-204ENST00000580997 AKNAD1Q5T1N1 836 aa14.72□□□□□ -0.05
SENP3-204ENST00000580997 CCSAPQ6IQ19 270 aaPredicted RBP14.72□□□□□ -0.05
SENP3-204ENST00000580997 KLHDC9Q8NEP7 349 aa14.72□□□□□ -0.05
SENP3-204ENST00000580997 LRCH3Q96II8 777 aa14.72□□□□□ -0.05
SENP3-204ENST00000580997 TSEN34Q9BSV6 310 aaKnown RBP14.72□□□□□ -0.05
SENP3-204ENST00000580997 ATP11BQ9Y2G3 1177 aa14.72□□□□□ -0.05
SENP3-204ENST00000580997 HAND2P61296 217 aa14.71□□□□□ -0.05
SENP3-204ENST00000580997 MDM2Q00987 491 aaPredicted RBP14.71□□□□□ -0.05
SENP3-204ENST00000580997 MFSD6Q6ZSS7 791 aa14.71□□□□□ -0.05
SENP3-204ENST00000580997 RASGRP2Q7LDG7 609 aa14.71□□□□□ -0.05
SENP3-204ENST00000580997 CCDC144CPQ8IYA2 1237 aa14.71□□□□□ -0.05
SENP3-204ENST00000580997 FERMT2Q96AC1 680 aa14.71□□□□□ -0.05
SENP3-204ENST00000580997 TRERF1Q96PN7 1200 aa14.71□□□□□ -0.05
SENP3-204ENST00000580997 KATNBL1Q9H079 304 aa14.71□□□□□ -0.05
SENP3-204ENST00000580997 A1CFQ9NQ94 594 aaKnown RBP14.71□□□□□ -0.05
SENP3-204ENST00000580997 HOMER2Q9NSB8 354 aa14.71□□□□□ -0.05
SENP3-204ENST00000580997 RNF146Q9NTX7 359 aa14.71□□□□□ -0.05
SENP3-204ENST00000580997 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.71□□□□□ -0.05
SENP3-204ENST00000580997 ISY1Q9ULR0 285 aaKnown RBP14.71□□□□□ -0.05
SENP3-204ENST00000580997 SMCHD1A6NHR9 2005 aa14.71□□□□□ -0.05
SENP3-204ENST00000580997 SYNRGQ9UMZ2 1314 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 COL6A3P12111 3177 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 A0A1W2PQ45 241 aaPredicted RBP14.7□□□□□ -0.06
SENP3-204ENST00000580997 A0A1W2PQY0 241 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 POTEB2H3BUK9 544 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 HIP1O00291 1037 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 ZNF213O14771 459 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 ICAM1P05362 532 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 CST5P28325 142 aaPredicted RBP14.7□□□□□ -0.06
SENP3-204ENST00000580997 NKX3-2P78367 333 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 TRIM60Q495X7 471 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 RRP12Q5JTH9 1297 aaKnown RBP14.7□□□□□ -0.06
SENP3-204ENST00000580997 CWC27Q6UX04 472 aaKnown RBP14.7□□□□□ -0.06
SENP3-204ENST00000580997 ARMCX2Q7L311 632 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 TBC1D10CQ8IV04 446 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 LENG1Q96BZ8 264 aaPredicted RBP14.7□□□□□ -0.06
SENP3-204ENST00000580997 CHMP4CQ96CF2 233 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 LBHD1Q9BQE6 289 aaPredicted RBP14.7□□□□□ -0.06
SENP3-204ENST00000580997 RANBP17Q9H2T7 1088 aaKnown RBP14.7□□□□□ -0.06
SENP3-204ENST00000580997 RNF41Q9H4P4 317 aaPredicted RBP14.7□□□□□ -0.06
SENP3-204ENST00000580997 TOMM22Q9NS69 142 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 PRKAG2Q9UGJ0 569 aa14.7□□□□□ -0.06
SENP3-204ENST00000580997 ZHX1Q9UKY1 873 aaPredicted RBP14.7□□□□□ -0.06
SENP3-204ENST00000580997 SUPT16HQ9Y5B9 1047 aaKnown RBP14.7□□□□□ -0.06
SENP3-204ENST00000580997 SOWAHBA6NEL2 793 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 MOXD2PA6NHM9 499 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 ADCY6O43306 1168 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 SNHG28P0DPA3 235 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 PDHBP11177 359 aa14.69□□□□□ -0.06
SENP3-204ENST00000580997 ALAS1P13196 640 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms